Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g23909 Brassica carinata HOM05D007581 ORTHO05D009250 1.2e-49 199.9 133 100.0
Sp6g07100 Schrenkiella parvula HOM05D007581 ORTHO05D009250 1.8e-45 186.0 131 94.7
Thhalv10029062m.g Eutrema salsugineum HOM05D007581 ORTHO05D009250 1.0e-43 180.3 131 90.1
BolC2t10277H Brassica oleracea HOM05D007581 ORTHO05D009250 3.2e-42 175.3 133 90.2
AT4G10330 Arabidopsis thaliana HOM05D007581 ORTHO05D009250 4.2e-42 174.9 129 88.4
A02p26660 Brassica napus HOM05D007581 ORTHO05D009250 1.0e-40 170.2 133 90.2
BraA02t07670Z Brassica rapa HOM05D007581 ORTHO05D009250 1.0e-40 170.2 133 90.2
BcaC03g16403 Brassica carinata HOM05D007581 ORTHO05D009250 2.0e-39 166.0 133 88.7
C02p42350 Brassica napus HOM05D007581 ORTHO05D009250 2.0e-39 166.0 133 88.7
Aa31LG9G11680 Aethionema arabicum HOM05D007581 ORTHO05D009250 8.2e-38 160.6 131 80.2
Carub.0006s2893 Capsella rubella HOM05D007581 ORTHO05D009250 1.8e-37 159.5 129 86.0
CARHR256310 Cardamine hirsuta HOM05D007581 ORTHO05D009250 1.0e-35 153.7 129 82.2
AL6G44200 Arabidopsis lyrata HOM05D007581 ORTHO05D009250 8.5e-35 150.6 129 87.6
THA.LOC104815611 Tarenaya hassleriana HOM05D007581 ORTHO05D009250 1.3e-30 136.7 127 80.3
CSS0015328 Camellia sinensis var. sinensis HOM05D007581 ORTHO05D009250 2.0e-28 129.4 135 65.2
Peaxi162Scf00078g01222 Petunia axillaris HOM05D007581 ORTHO05D009250 6.5e-27 124.4 132 66.7
SGA_v2.0_scaffold118G32651 Striga asiatica HOM05D007581 ORTHO05D009250 1.9e-26 122.9 130 63.8
Potri.019G063300 Populus trichocarpa HOM05D007581 ORTHO05D009250 1.2e-25 120.2 137 65.7
Nitab4.5_0000079g0010 Nicotiana tabacum HOM05D000128 ORTHO05D000059 1.6e-25 119.8 129 66.7
ECA247G3877 Erigeron canadensis HOM05D007581 ORTHO05D009250 2.7e-25 119.0 139 62.6
Phvul.004G128300 Phaseolus vulgaris HOM05D007581 ORTHO05D009250 3.6e-25 118.6 131 64.1
Nitab4.5_0006526g0010 Nicotiana tabacum HOM05D000128 ORTHO05D000059 1.0e-24 117.1 129 65.1
EL10Ac1g01297 Beta vulgaris HOM05D007581 ORTHO05D009250 1.8e-24 116.3 140 63.6
Medtr6g060172 Medicago truncatula HOM05D007581 ORTHO05D009250 4.0e-24 115.2 131 64.9
Glyma.16G205300 Glycine max HOM05D007581 ORTHO05D009250 5.2e-24 114.8 131 64.1
Manes.15G183800 Manihot esculenta HOM05D007581 ORTHO05D009250 5.2e-24 114.8 139 65.5
Eucgr.F04100 Eucalyptus grandis HOM05D007581 ORTHO05D009250 6.8e-24 114.4 129 69.8
Atru.chr13.2628 Acer truncatum HOM05D007581 ORTHO05D009250 8.8e-24 114.0 138 65.2
Sc26g0002080 Simmondsia chinensis HOM05D007581 ORTHO05D009250 2.0e-23 112.8 127 65.4
Gohir.D08G248900 Gossypium hirsutum HOM05D007581 ORTHO05D009250 2.6e-23 112.5 129 62.8
Cc10_g16220 Coffea canephora HOM05D007581 ORTHO05D009250 4.4e-23 111.7 121 71.9
Haze_14032 Corylus avellana HOM05D007581 ORTHO05D009250 4.4e-23 111.7 129 67.4
CAN.G630.61 Capsicum annuum HOM05D007581 ORTHO05D009250 7.5e-23 110.9 135 61.5
Sabra19G0076500 Salix brachista HOM05D007581 ORTHO05D009250 9.8e-23 110.5 137 66.4
Sabra19G0080300 Salix brachista HOM05D007581 ORTHO05D009250 9.8e-23 110.5 137 66.4
PGSC0003DMG400016228 Solanum tuberosum HOM05D007581 ORTHO05D009250 2.8e-22 109.0 133 61.7
Dinv37395 Davidia involucrata HOM05D007581 ORTHO05D009250 8.3e-22 107.5 130 66.2
Gohir.A08G228600 Gossypium hirsutum HOM05D007581 ORTHO05D009250 8.3e-22 107.5 127 67.7
Gorai.004G265500 Gossypium raimondii HOM05D007581 ORTHO05D009250 8.3e-22 107.5 129 66.7
Sopen11g004800 Solanum pennellii HOM05D007581 ORTHO05D009250 8.3e-22 107.5 133 61.7
ClCG08G001940 Citrullus lanatus HOM05D007581 ORTHO05D009250 3.1e-21 105.5 139 61.9
Solyc11g009030.1 Solanum lycopersicum HOM05D007581 ORTHO05D009250 3.1e-21 105.5 130 61.5
CiPaw.04G007300 Carya illinoinensis HOM05D007581 ORTHO05D009250 4.1e-21 105.1 134 64.9
MD00G1103300 Malus domestica HOM05D007581 ORTHO05D009250 4.1e-21 105.1 143 57.3
Migut.C01409 Erythranthe guttata HOM05D007581 ORTHO05D009250 5.4e-21 104.8 133 64.7
Glyma.09G154800 Glycine max HOM05D007581 ORTHO05D009250 7.0e-21 104.4 131 66.4
PSO210G2853 Papaver somniferum HOM05D007581 ORTHO05D009250 7.0e-21 104.4 136 64.0
TWI18G0093 Tripterygium wilfordii HOM05D007581 ORTHO05D009250 7.0e-21 104.4 128 62.5
MBI06_g43033_MAGBIO Magnolia biondii HOM05D007581 ORTHO05D009250 1.2e-20 103.6 133 64.7
CsaV3_5G039340 Cucumis sativus L. HOM05D007581 ORTHO05D009250 2.0e-20 102.8 140 58.6
Duzib116G0131 Durio zibethinus HOM05D007581 ORTHO05D009250 2.7e-20 102.4 143 51.7
Aqoxy6G00030 Aquilegia oxysepala HOM05D007581 ORTHO05D009250 3.5e-20 102.1 130 59.2
MELO3C022112.2 Cucumis melo HOM05D007581 ORTHO05D009250 5.9e-20 101.3 140 57.9
Lj2g0009073 Lotus japonicus HOM05D007581 ORTHO05D009250 5.9e-20 101.3 129 60.5
CANSAT25G1375 Cannabis sativa HOM05D007581 ORTHO05D009250 1.0e-19 100.5 134 64.9
CANSAT25G2017 Cannabis sativa HOM05D007581 ORTHO05D009250 1.0e-19 100.5 134 64.9
Lsat_1_v5_gn_1_24761 Lactuca sativa HOM05D007581 ORTHO05D009250 1.3e-19 100.1 139 64.0
GSVIVG01037110001 Vitis vinifera HOM05D007581 ORTHO05D009250 3.8e-19 98.6 129 57.4
Prupe.8G001100 Prunus persica HOM05D007581 ORTHO05D009250 8.6e-19 97.4 145 54.5
Sed0022412 Sechium edule HOM05D007581 ORTHO05D009250 1.1e-18 97.1 137 62.8
FAN19G1324 Fragaria x ananassa HOM05D007581 ORTHO05D009250 1.9e-18 96.3 137 54.7
QL09p000889 Quercus lobata HOM05D007581 ORTHO05D009250 2.5e-18 95.9 128 64.8
Ca_02136_v3 Cicer arietinum L. HOM05D007581 ORTHO05D009250 1.6e-17 93.2 133 61.7
TAR628G1203 Trochodendron aralioides HOM05D007581 ORTHO05D009250 2.1e-17 92.8 139 61.9
MSTRG.25512 Avicennia marina HOM05D007581 ORTHO05D009250 2.8e-17 92.4 129 63.6
Lalb_Chr02g0149891 Lupinus albus HOM05D007581 ORTHO05D009250 2.8e-17 92.4 129 58.9
Nn5g27166 Nelumbo nucifera HOM05D007581 ORTHO05D009250 4.7e-17 91.7 130 63.8
FvH4_2g00130 Fragaria vesca HOM05D007581 ORTHO05D009250 1.0e-16 90.5 145 53.8
FAN24G1736 Fragaria x ananassa HOM05D007581 ORTHO05D009250 1.0e-16 90.5 145 53.8
Hund16921 Selenicereus undatus HOM05D007581 ORTHO05D009250 2.3e-16 89.4 128 64.1
HPP92_009197 Vanilla planifolia HOM05D007581 ORTHO05D009250 2.3e-16 89.4 127 60.6
Ciclev10022815m.g Citrus clementina HOM05D007581 ORTHO05D009250 3.0e-16 89.0 133 62.4
Lalb_Chr01g0008751 Lupinus albus HOM05D007581 ORTHO05D009250 3.0e-16 89.0 134 60.4
Os01g0886500 Oryza sativa ssp. japonica HOM05D007581 ORTHO05D009250 5.7e-15 84.7 123 53.7
Os11g0242700 Oryza sativa ssp. japonica HOM05D007581 ORTHO05D009250 5.7e-15 84.7 136 61.0
unitig_578.g16109 Utricularia gibba HOM05D007581 ORTHO05D009250 1.7e-14 83.2 132 59.1
Zm00001eb145430 Zea mays HOM05D007581 ORTHO05D009250 6.3e-14 81.3 132 61.4
COL.COLO4_25109 Corchorus olitorius HOM05D007581 ORTHO05D009250 8.3e-14 80.9 89 75.3
RcHm_v2.0_Chr6g0249391 Rosa chinensis HOM05D007581 ORTHO05D009250 8.3e-14 80.9 136 58.1
HanXRQChr04g0102981 Helianthus annuus HOM05D007581 ORTHO05D009250 1.4e-13 80.1 101 74.3
PSO761G0508 Papaver somniferum HOM05D007581 ORTHO05D009250 1.4e-13 80.1 99 70.7
Psat1g111920 Pisum sativum HOM05D007581 ORTHO05D009250 9.2e-13 77.4 117 55.6
TPR.G20128 Trifolium pratense HOM05D007581 ORTHO05D009250 2.7e-12 75.9 130 58.5
ATR1089G122 Amborella trichopoda HOM05D007581 ORTHO05D009250 3.5e-12 75.5 134 57.5
AUR62013400 Chenopodium quinoa HOM05D007581 ORTHO05D009250 3.5e-12 75.5 161 50.3
Zm00001eb168090 Zea mays HOM05D007581 ORTHO05D009250 5.9e-12 74.7 129 58.9
MD05G1000400 Malus domestica HOM05D007581 ORTHO05D009250 7.8e-12 74.3 93 65.6
Oeu028611.1 Olea europaea HOM05D007581 ORTHO05D009250 1.3e-11 73.6 89 74.2
DCAR_014049 Daucus carota HOM05D000133 ORTHO05D000259 8.6e-11 70.9 156 48.7
Cpa.g.sc21.238 Carica papaya HOM05D007581 ORTHO05D009250 4.3e-10 68.6 86 60.5
TWI75G0477 Tripterygium wilfordii HOM05D007581 ORTHO05D009250 1.4e-08 63.5 87 70.1
MD11G1234100 Malus domestica HOM05D007581 ORTHO05D009250 5.2e-08 61.6 64 50.0
A08p03830 Brassica napus HOM05D020275 ORTHO05D021859 2.6e-07 59.3 96 65.6
VMungo0464G1076 Vigna mungo HOM05D007581 ORTHO05D009250 2.6e-07 59.3 115 46.1
AUR62038551 Chenopodium quinoa HOM05D007581 ORTHO05D009250 3.4e-07 58.9 122 36.9
MD02G1202800 Malus domestica HOM05D007581 ORTHO05D009250 3.4e-07 58.9 99 49.5
Thhalv10011872m.g Eutrema salsugineum HOM05D020275 ORTHO05D021859 4.4e-07 58.5 94 56.4
BraA08t32411Z Brassica rapa HOM05D020275 ORTHO05D021859 9.8e-07 57.4 91 67.0
Thecc.08G167500 Theobroma cacao HOM05D007581 ORTHO05D009250 1.3e-06 57.0 62 64.5


User provided reference genes

Program Settings