Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g23850 Brassica carinata HOM05D000496 ORTHO05D000411 3.7e-63 244.6 114 100.0
BcaB04g17790 Brassica carinata HOM05D000496 ORTHO05D000411 1.2e-34 149.8 108 66.7
BcaC06g36630 Brassica carinata HOM05D000496 ORTHO05D000411 2.1e-34 149.1 100 68.0
BcaC02g10886 Brassica carinata HOM05D000496 ORTHO05D000411 1.4e-33 146.4 102 64.7
BcaC06g36411 Brassica carinata HOM05D000496 ORTHO05D000411 4.0e-33 144.8 100 65.0
BcaC07g37790 Brassica carinata HOM05D000496 ORTHO05D000411 4.0e-33 144.8 102 63.7
BcaC01g02297 Brassica carinata HOM05D000496 ORTHO05D000411 2.0e-32 142.5 101 65.3
BolC8t51212H Brassica oleracea HOM05D000496 ORTHO05D000411 2.6e-32 142.1 101 62.4
BcaC03g15081 Brassica carinata HOM05D000496 ORTHO05D000411 9.9e-32 140.2 101 62.4
BcaB06g27366 Brassica carinata HOM05D000496 ORTHO05D000411 1.7e-31 139.4 97 66.0
BcaC09g48758 Brassica carinata HOM05D000496 ORTHO05D000411 3.8e-31 138.3 101 62.4
C01p46210 Brassica napus HOM05D000496 ORTHO05D000411 3.8e-31 138.3 101 62.4
BcaC02g09241 Brassica carinata HOM05D000496 ORTHO05D000411 1.6e-29 132.9 97 58.8
BcaC02g11107 Brassica carinata HOM05D000496 ORTHO05D000411 2.0e-24 115.9 101 52.5
BcaC02g10487 Brassica carinata HOM05D011471 ORTHO05D014744 1.4e-22 109.8 100 56.0
AT3G31430 Arabidopsis thaliana HOM05D000496 ORTHO05D000411 6.6e-20 100.9 100 46.0
BcaC08g42965 Brassica carinata HOM05D000496 ORTHO05D000411 1.8e-17 92.8 101 42.6
Aa31LG1G4950 Aethionema arabicum HOM05D000496 ORTHO05D000411 4.0e-17 91.7 101 38.6
Aa31LG6G9170 Aethionema arabicum HOM05D000496 ORTHO05D000411 4.0e-17 91.7 101 39.6
Aa31sc1015G10 Aethionema arabicum HOM05D000496 ORTHO05D000411 9.0e-17 90.5 101 39.6
Aa31sc387G10 Aethionema arabicum HOM05D000496 ORTHO05D000411 2.6e-16 89.0 100 41.0
BcaB01g01422 Brassica carinata HOM05D011471 ORTHO05D000411 2.2e-15 85.9 86 51.2
BcaC02g08608 Brassica carinata HOM05D000496 ORTHO05D000411 3.8e-15 85.1 89 42.7
Aa31LG5G23740 Aethionema arabicum HOM05D000496 ORTHO05D000411 2.4e-14 82.4 98 37.8
Aa31LG9G3350 Aethionema arabicum HOM05D000496 ORTHO05D000411 2.4e-14 82.4 103 39.8
CARHR292290 Cardamine hirsuta HOM05D000496 ORTHO05D000411 1.6e-13 79.7 69 50.7
BcaB08g35825 Brassica carinata HOM05D013103 ORTHO05D018244 1.3e-12 76.6 102 39.2
BcaB01g00938 Brassica carinata HOM05D000496 ORTHO05D000411 8.7e-12 73.9 96 32.3
BcaB01g00478 Brassica carinata HOM05D000496 ORTHO05D000411 3.3e-11 72.0 86 40.7
Aa31sc480G10 Aethionema arabicum HOM05D000003 ORTHO05D000004 4.3e-11 71.6 101 31.7
BcaB04g17740 Brassica carinata HOM05D000496 ORTHO05D000411 2.8e-10 68.9 98 35.7
AT5G36228 Arabidopsis thaliana HOM05D000496 ORTHO05D000411 1.8e-09 66.2 103 29.1
BcaB06g25722 Brassica carinata HOM05D013103 ORTHO05D018244 2.4e-09 65.9 80 37.5
Aa31sc153G50 Aethionema arabicum HOM05D000003 ORTHO05D000411 1.2e-08 63.5 85 36.5
Thhalv10012330m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 1.5e-08 63.2 84 38.1
Aa31LG2G16830 Aethionema arabicum HOM05D000496 ORTHO05D000411 5.8e-08 61.2 100 33.0
Rhsim04G0047100 Rhododendron simsii HOM05D000003 ORTHO05D000126 1.3e-07 60.1 90 35.6
Aa31sc52G80 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.7e-07 59.7 71 38.0
BcaC09g51704 Brassica carinata HOM05D000496 ORTHO05D000411 4.9e-07 58.2 36 66.7
QL04p035145 Quercus lobata HOM05D000003 ORTHO05D000126 1.1e-06 57.0 91 31.9
QL04p035160 Quercus lobata HOM05D000003 ORTHO05D000126 1.1e-06 57.0 91 31.9
QL04p035086 Quercus lobata HOM05D000003 ORTHO05D000126 1.4e-06 56.6 91 31.9
BcaB05g22432 Brassica carinata HOM05D000003 ORTHO05D000004 1.9e-06 56.2 73 41.1
QL05p080911 Quercus lobata HOM05D000774 ORTHO05D000602 1.9e-06 56.2 86 30.2
Aa31LG8G12070 Aethionema arabicum HOM05D000496 ORTHO05D000411 5.5e-06 54.7 61 36.1
Lj1P1051T34 Lonicera japonica HOM05D000003 ORTHO05D000126 5.5e-06 54.7 90 32.2
Rhsim04G0115200 Rhododendron simsii HOM05D000003 ORTHO05D000126 5.5e-06 54.7 91 31.9
C09p39910 Brassica napus HOM05D000496 ORTHO05D000411 9.3e-06 53.9 78 32.1


User provided reference genes

Program Settings