Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g23805 Brassica carinata HOM05D007901 ORTHO05D016734 1.7e-119 432.6 206 100.0
BcaC06g31809 Brassica carinata HOM05D007901 ORTHO05D016734 1.1e-102 376.7 223 82.5
BcaC02g10635 Brassica carinata HOM05D007901 ORTHO05D016734 2.7e-96 355.5 223 78.5
C04p26040 Brassica napus HOM05D007901 ORTHO05D016734 2.7e-96 355.5 223 78.5
BolC4t24201H Brassica oleracea HOM05D007901 ORTHO05D016734 2.7e-96 355.5 223 78.5
BcaB04g20260 Brassica carinata HOM05D007901 ORTHO05D016734 6.0e-96 354.4 222 77.0
BraA09t38123Z Brassica rapa HOM05D007901 ORTHO05D016734 9.9e-91 337.0 222 74.8
Thhalv10023723m.g Eutrema salsugineum HOM05D007901 ORTHO05D012782 9.5e-33 144.4 153 47.1
Thhalv10023895m.g Eutrema salsugineum HOM05D007901 ORTHO05D012782 1.6e-32 143.7 147 52.4
BraA01t03070Z Brassica rapa HOM05D007901 ORTHO05D012782 8.0e-32 141.4 160 48.1
BcaB04g20274 Brassica carinata HOM05D007901 ORTHO05D012782 6.8e-31 138.3 161 48.4
BcaC09g49391 Brassica carinata HOM05D007901 ORTHO05D012782 4.4e-30 135.6 160 47.5
C01p37150 Brassica napus HOM05D007901 ORTHO05D012782 4.4e-30 135.6 160 47.5
BolC1t03680H Brassica oleracea HOM05D007901 ORTHO05D012782 5.7e-30 135.2 160 47.5
BcaB08g35962 Brassica carinata HOM05D007901 ORTHO05D010902 8.3e-29 131.3 207 41.5
CARHR052680 Cardamine hirsuta HOM05D007901 ORTHO05D010902 1.2e-27 127.5 206 40.3
BcaC04g20178 Brassica carinata HOM05D007901 ORTHO05D010902 1.6e-27 127.1 204 39.2
BolC9t57543H Brassica oleracea HOM05D007901 ORTHO05D010902 1.6e-27 127.1 204 39.2
C09p47250 Brassica napus HOM05D007901 ORTHO05D010902 2.7e-27 126.3 203 39.4
A10p13190 Brassica napus HOM05D007901 ORTHO05D010902 5.9e-27 125.2 207 38.6
A10p13320 Brassica napus HOM05D007901 ORTHO05D010902 7.8e-27 124.8 207 38.6
C09p46950 Brassica napus HOM05D007901 ORTHO05D010902 2.3e-26 123.2 203 38.9
BolC9t57581H Brassica oleracea HOM05D007901 ORTHO05D010902 2.3e-26 123.2 203 38.9
Carub.0002s0501 Capsella rubella HOM05D007901 ORTHO05D012782 2.3e-26 123.2 152 45.4
BraA10t43416Z Brassica rapa HOM05D007901 ORTHO05D010902 2.9e-26 122.9 207 38.2
A10p13180 Brassica napus HOM05D007901 ORTHO05D010902 1.1e-25 120.9 212 38.7
BraA10t43415Z Brassica rapa HOM05D007901 ORTHO05D010902 1.1e-25 120.9 212 38.7
BraA10t43433Z Brassica rapa HOM05D007901 ORTHO05D010902 1.5e-25 120.6 207 38.2
AL2G16410 Arabidopsis lyrata HOM05D007901 ORTHO05D012782 1.2e-24 117.5 157 41.4
AT1G60240 Arabidopsis thaliana HOM05D007901 ORTHO05D012782 3.6e-24 115.9 153 42.5
C01p36710 Brassica napus HOM05D007901 ORTHO05D010902 1.0e-23 114.4 204 38.7
BolC1t03631H Brassica oleracea HOM05D007901 ORTHO05D010902 1.0e-23 114.4 204 38.7
A01p28980 Brassica napus HOM05D007901 ORTHO05D010902 1.4e-23 114.0 203 36.0
A01p29180 Brassica napus HOM05D007901 ORTHO05D010902 2.3e-23 113.2 203 35.5
BolC1t03653H Brassica oleracea HOM05D007901 ORTHO05D010902 3.0e-23 112.8 204 38.2
BcaB04g20261 Brassica carinata HOM05D007901 ORTHO05D010902 4.0e-23 112.5 206 36.9
BcaB04g20243 Brassica carinata HOM05D007901 ORTHO05D010902 5.2e-23 112.1 203 37.4
BraA01t03004Z Brassica rapa HOM05D007901 ORTHO05D010902 1.2e-22 110.9 203 35.0
AT1G60350 Arabidopsis thaliana HOM05D007901 ORTHO05D010902 7.5e-22 108.2 203 36.5
AL2G16320 Arabidopsis lyrata HOM05D007901 ORTHO05D010902 1.7e-21 107.1 200 37.0
Thhalv10024006m.g Eutrema salsugineum HOM05D007901 ORTHO05D012782 2.2e-21 106.7 141 44.7
BraA01t02977Z Brassica rapa HOM05D007901 ORTHO05D010902 6.4e-21 105.1 162 37.7
Thhalv10023876m.g Eutrema salsugineum HOM05D007901 ORTHO05D012782 6.4e-21 105.1 157 38.2
Carub.0002s0497 Capsella rubella HOM05D007901 ORTHO05D010902 8.3e-21 104.8 208 35.6
Carub.0170s0002 Capsella rubella HOM05D007901 ORTHO05D010902 8.3e-21 104.8 203 36.0
AL2G16550 Arabidopsis lyrata HOM05D007901 ORTHO05D010902 1.1e-20 104.4 200 37.0
CARHR052720 Cardamine hirsuta HOM05D007901 ORTHO05D012782 1.4e-20 104.0 146 37.7
Sp2g04350 Schrenkiella parvula HOM05D007901 ORTHO05D010902 3.2e-20 102.8 202 36.6
C05p51210 Brassica napus HOM05D021084 ORTHO05D012782 4.1e-20 102.4 53 84.9
AT1G60280 Arabidopsis thaliana HOM05D007901 ORTHO05D010902 5.4e-20 102.1 208 36.5
Sp2g04430 Schrenkiella parvula HOM05D007901 ORTHO05D010902 1.6e-19 100.5 209 37.8
AT1G60300 Arabidopsis thaliana HOM05D007901 ORTHO05D010902 2.0e-19 100.1 205 35.1
AT1G60380 Arabidopsis thaliana HOM05D007901 ORTHO05D010902 1.0e-18 97.8 201 34.8
Carub.0170s0003 Capsella rubella HOM05D007901 ORTHO05D010902 2.3e-18 96.7 162 37.7
AT1G60340 Arabidopsis thaliana HOM05D007901 ORTHO05D010902 5.0e-18 95.5 162 40.1
Carub.0002s0495 Capsella rubella HOM05D007901 ORTHO05D010902 6.6e-18 95.1 209 33.5
Carub.0002s0498 Capsella rubella HOM05D007901 ORTHO05D010902 1.1e-17 94.4 151 33.8
AL2G16330 Arabidopsis lyrata HOM05D007901 ORTHO05D010902 3.3e-17 92.8 141 37.6
CARHR052690 Cardamine hirsuta HOM05D007901 ORTHO05D016734 4.3e-17 92.4 132 38.6
AL2G16360 Arabidopsis lyrata HOM05D007901 ORTHO05D010902 9.5e-17 91.3 145 34.5
Thhalv10024149m.g Eutrema salsugineum HOM05D007901 ORTHO05D012782 8.0e-16 88.2 140 37.1
Thhalv10024148m.g Eutrema salsugineum HOM05D007901 ORTHO05D012782 1.8e-15 87.0 140 40.0
AL2G16340 Arabidopsis lyrata HOM05D007901 ORTHO05D010902 4.0e-15 85.9 114 39.5
BcaC04g20143 Brassica carinata HOM05D007901 ORTHO05D010902 1.2e-14 84.3 150 35.3
Thhalv10024128m.g Eutrema salsugineum HOM05D007901 ORTHO05D012782 1.2e-14 84.3 141 36.2
A09p25480 Brassica napus HOM05D007901 ORTHO05D016734 1.5e-14 84.0 52 76.9
BcaC09g49444 Brassica carinata HOM05D007901 ORTHO05D010902 4.4e-14 82.4 147 34.7
CARHR052710 Cardamine hirsuta HOM05D007901 ORTHO05D012782 8.3e-13 78.2 142 31.7
BcaC09g49416 Brassica carinata HOM05D007901 ORTHO05D010902 1.5e-09 67.4 102 40.2
C01p36960 Brassica napus HOM05D007901 ORTHO05D010902 1.5e-09 67.4 102 40.2
BcaC02g10632 Brassica carinata HOM05D007901 ORTHO05D012782 5.8e-06 55.5 53 50.9


User provided reference genes

Program Settings