Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g23802 Brassica carinata HOM05D000313 ORTHO05D006284 1.6e-80 302.8 163 100.0
BcaC02g12007 Brassica carinata HOM05D004956 ORTHO05D006284 1.1e-20 104.0 73 82.2
C04p08990 Brassica napus HOM05D004956 ORTHO05D006284 1.1e-20 104.0 73 82.2
BolC4t22488H Brassica oleracea HOM05D004956 ORTHO05D006284 3.3e-20 102.4 73 80.8
A05p07510 Brassica napus HOM05D004956 ORTHO05D006284 7.3e-20 101.3 73 80.8
BraA05t19716Z Brassica rapa HOM05D004956 ORTHO05D006284 7.3e-20 101.3 73 80.8
BcaB02g09182 Brassica carinata HOM05D004956 ORTHO05D006284 8.9e-18 94.4 66 81.8
Sp4g20880 Schrenkiella parvula HOM05D004956 ORTHO05D006284 1.7e-16 90.1 73 72.6
Thhalv10016889m.g Eutrema salsugineum HOM05D004956 ORTHO05D006284 9.2e-15 84.3 73 69.9
CARHR133230 Cardamine hirsuta HOM05D004956 ORTHO05D006284 3.3e-12 75.9 73 64.4
AT2G38550 Arabidopsis thaliana HOM05D004956 ORTHO05D006284 4.3e-12 75.5 73 64.4
Carub.0004s2054 Capsella rubella HOM05D004956 ORTHO05D006284 2.1e-11 73.2 73 61.6
AL4G35830 Arabidopsis lyrata HOM05D004956 ORTHO05D006284 1.1e-10 70.9 73 61.6
BcaC07g37360 Brassica carinata HOM05D000313 ORTHO05D000065 2.3e-10 69.7 164 34.8
BolC8t47660H Brassica oleracea HOM05D000313 ORTHO05D000065 2.3e-10 69.7 164 34.8
BcaC05g27418 Brassica carinata HOM05D000313 ORTHO05D000065 5.2e-10 68.6 65 58.5
BcaC03g16635 Brassica carinata HOM05D000313 ORTHO05D000065 6.8e-10 68.2 86 48.8
A02p31310 Brassica napus HOM05D000313 ORTHO05D000065 6.8e-10 68.2 157 35.7
Aa31LG5G23380 Aethionema arabicum HOM05D004956 ORTHO05D006284 1.5e-09 67.0 70 62.9
BolC1t05664H Brassica oleracea HOM05D000313 ORTHO05D000065 2.0e-09 66.6 89 49.4
C08p08060 Brassica napus HOM05D000313 ORTHO05D000065 2.6e-09 66.2 164 33.5
BcaC03g15391 Brassica carinata HOM05D000313 ORTHO05D000065 3.4e-09 65.9 164 34.1
BolC1t03159H Brassica oleracea HOM05D000313 ORTHO05D000065 3.4e-09 65.9 164 34.1
BolC7t43562H Brassica oleracea HOM05D000313 ORTHO05D000065 3.4e-09 65.9 164 34.1
BraA06t24100Z Brassica rapa HOM05D000313 ORTHO05D000065 3.4e-09 65.9 89 48.3
C05p31010 Brassica napus HOM05D000313 ORTHO05D000065 4.4e-09 65.5 165 32.7
BraA09t40157Z Brassica rapa HOM05D000313 ORTHO05D000065 7.5e-09 64.7 72 50.0
BcaC02g10698 Brassica carinata HOM05D000313 ORTHO05D000065 9.8e-09 64.3 154 37.7
C03p10480 Brassica napus HOM05D000313 ORTHO05D000065 9.8e-09 64.3 99 43.4
BcaB04g16903 Brassica carinata HOM05D000313 ORTHO05D000065 1.3e-08 63.9 72 45.8
C01p43800 Brassica napus HOM05D000313 ORTHO05D000065 1.3e-08 63.9 164 33.5
C02p49510 Brassica napus HOM05D000313 ORTHO05D000065 1.3e-08 63.9 72 48.6
BraA02t08012Z Brassica rapa HOM05D000313 ORTHO05D000065 1.7e-08 63.5 122 38.5
BolC5t31824H Brassica oleracea HOM05D000313 ORTHO05D000065 2.2e-08 63.2 72 48.6
BcaB01g02353 Brassica carinata HOM05D000313 ORTHO05D000065 2.9e-08 62.8 89 43.8
A07p11070 Brassica napus HOM05D000313 ORTHO05D000065 2.9e-08 62.8 80 45.0
BcaC01g04173 Brassica carinata HOM05D000313 ORTHO05D000065 4.9e-08 62.0 93 39.8
C03p44260 Brassica napus HOM05D000313 ORTHO05D000065 4.9e-08 62.0 93 39.8
C05p33640 Brassica napus HOM05D000313 ORTHO05D000065 4.9e-08 62.0 72 50.0
BolC5t32095H Brassica oleracea HOM05D000313 ORTHO05D000065 4.9e-08 62.0 72 50.0
BcaC09g49275 Brassica carinata HOM05D000313 ORTHO05D000065 6.4e-08 61.6 104 39.4
C01p40640 Brassica napus HOM05D000313 ORTHO05D000065 6.4e-08 61.6 104 39.4
BcaC02g08920 Brassica carinata HOM05D000313 ORTHO05D000065 8.3e-08 61.2 173 30.6
BcaC02g12357 Brassica carinata HOM05D000313 ORTHO05D000065 8.3e-08 61.2 158 31.6
C03p79730 Brassica napus HOM05D000313 ORTHO05D000065 8.3e-08 61.2 72 44.4
BolC4t26494H Brassica oleracea HOM05D000313 ORTHO05D000065 8.3e-08 61.2 165 30.9
BcaB01g05260 Brassica carinata HOM05D000313 ORTHO05D000065 1.1e-07 60.8 128 36.7
A01p05990 Brassica napus HOM05D000313 ORTHO05D000065 1.1e-07 60.8 72 47.2
A01p33560 Brassica napus HOM05D000313 ORTHO05D000065 1.1e-07 60.8 72 47.2
C04p49110 Brassica napus HOM05D000313 ORTHO05D000065 1.1e-07 60.8 163 31.3
BolC4t27877H Brassica oleracea HOM05D000313 ORTHO05D000065 1.1e-07 60.8 65 50.8
BraA07t29209Z Brassica rapa HOM05D000313 ORTHO05D000065 1.1e-07 60.8 72 47.2
BraA08t34048Z Brassica rapa HOM05D000313 ORTHO05D000065 1.1e-07 60.8 73 46.6
BcaC06g36665 Brassica carinata HOM05D000313 ORTHO05D000065 1.4e-07 60.5 165 30.9
BolC7t40570H Brassica oleracea HOM05D000313 ORTHO05D000065 1.4e-07 60.5 165 30.9
BolC4t23669H Brassica oleracea HOM05D000313 ORTHO05D000065 1.9e-07 60.1 72 44.4
A01p17050 Brassica napus HOM05D000313 ORTHO05D000065 4.1e-07 58.9 78 39.7
C01p04300 Brassica napus HOM05D000313 ORTHO05D000065 4.1e-07 58.9 165 30.3
C04p04790 Brassica napus HOM05D000313 ORTHO05D000065 4.1e-07 58.9 72 44.4
BcaNung03865 Brassica carinata HOM05D000313 ORTHO05D000065 5.4e-07 58.5 103 36.9
C07p00620 Brassica napus HOM05D000313 ORTHO05D000065 7.1e-07 58.2 164 29.9
BraA01t02116Z Brassica rapa HOM05D000313 ORTHO05D000065 9.2e-07 57.8 77 42.9
BolC1t03534H Brassica oleracea HOM05D000313 ORTHO05D000065 1.2e-06 57.4 90 40.0
BraA09t39507Z Brassica rapa HOM05D000313 ORTHO05D000065 1.2e-06 57.4 72 41.7
BcaB03g16224 Brassica carinata HOM05D000313 ORTHO05D000065 1.6e-06 57.0 162 29.0
BcaC02g07753 Brassica carinata HOM05D000313 ORTHO05D000065 1.6e-06 57.0 165 29.7
BolC4t25625H Brassica oleracea HOM05D000313 ORTHO05D000065 1.6e-06 57.0 164 31.1
BolC7t42040H Brassica oleracea HOM05D000313 ORTHO05D000065 1.6e-06 57.0 87 42.5
C01p35750 Brassica napus HOM05D000313 ORTHO05D000065 2.1e-06 56.6 165 30.3
C07p23830 Brassica napus HOM05D000313 ORTHO05D000065 2.1e-06 56.6 165 29.7
BolC8t47661H Brassica oleracea HOM05D000313 ORTHO05D000065 2.1e-06 56.6 142 33.1
BcaC03g16977 Brassica carinata HOM05D000313 ORTHO05D000065 2.7e-06 56.2 72 45.8
C02p48770 Brassica napus HOM05D000285 ORTHO05D005607 2.7e-06 56.2 72 45.8
C04p40420 Brassica napus HOM05D000313 ORTHO05D000065 2.7e-06 56.2 163 31.3
C08p08080 Brassica napus HOM05D000313 ORTHO05D000065 2.7e-06 56.2 142 33.8
A06p21080 Brassica napus HOM05D000808 ORTHO05D000065 4.6e-06 55.5 79 43.0
BcaC03g15390 Brassica carinata HOM05D000313 ORTHO05D000065 6.0e-06 55.1 171 30.4
A10p12060 Brassica napus HOM05D000313 ORTHO05D000065 6.0e-06 55.1 165 29.1
C03p84400 Brassica napus HOM05D000313 ORTHO05D000065 6.0e-06 55.1 108 36.1
C05p17990 Brassica napus HOM05D000313 ORTHO05D000065 7.8e-06 54.7 71 42.3


User provided reference genes

Program Settings