Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g23800 Brassica carinata HOM05D000471 ORTHO05D000199 6.2e-117 424.1 207 100.0
C05p37680 Brassica napus HOM05D000471 ORTHO05D000199 9.8e-30 134.4 110 58.2
A07p12530 Brassica napus HOM05D000471 ORTHO05D000199 1.2e-27 127.5 70 78.6
A05p29030 Brassica napus HOM05D000471 ORTHO05D000199 7.8e-27 124.8 70 77.1
BraSC35t46011Z Brassica rapa HOM05D000471 ORTHO05D000199 1.0e-26 124.4 70 77.1
BolC9t55313H Brassica oleracea HOM05D000471 ORTHO05D000199 1.3e-26 124.0 74 71.6
BcaB07g32558 Brassica carinata HOM05D000471 ORTHO05D000199 5.1e-26 122.1 67 77.6
BolC5t32887H Brassica oleracea HOM05D000471 ORTHO05D000199 5.1e-26 122.1 78 69.2
C06p16640 Brassica napus HOM05D000471 ORTHO05D000199 6.6e-26 121.7 70 75.7
C06p09110 Brassica napus HOM05D000471 ORTHO05D000199 1.5e-25 120.6 70 74.3
C03p66080 Brassica napus HOM05D000471 ORTHO05D000199 1.9e-25 120.2 70 74.3
BolC5t32511H Brassica oleracea HOM05D000471 ORTHO05D000199 3.3e-25 119.4 67 76.1
C08p09140 Brassica napus HOM05D000471 ORTHO05D000199 5.6e-25 118.6 70 72.9
A06p22860 Brassica napus HOM05D000471 ORTHO05D000199 9.5e-25 117.9 70 71.4
C04p30610 Brassica napus HOM05D000471 ORTHO05D000199 2.1e-24 116.7 70 71.4
C09p52520 Brassica napus HOM05D000471 ORTHO05D000199 4.7e-24 115.5 70 72.9
BolC9t58118H Brassica oleracea HOM05D000471 ORTHO05D000199 4.7e-24 115.5 70 72.9
C05p41480 Brassica napus HOM05D000471 ORTHO05D000199 8.1e-24 114.8 70 71.4
BolC3t18881H Brassica oleracea HOM05D000471 ORTHO05D000199 1.8e-23 113.6 63 76.2
C04p39280 Brassica napus HOM05D000471 ORTHO05D000199 2.3e-23 113.2 59 79.7
BraA06t25390Z Brassica rapa HOM05D000471 ORTHO05D015456 5.2e-23 112.1 59 78.0
C09p20800 Brassica napus HOM05D000471 ORTHO05D000199 1.5e-22 110.5 70 68.6
BolC9t54977H Brassica oleracea HOM05D000471 ORTHO05D000199 1.5e-22 110.5 70 68.6
BcaC01g02209 Brassica carinata HOM05D000471 ORTHO05D015456 3.4e-22 109.4 70 67.1
C02p57260 Brassica napus HOM05D000471 ORTHO05D015456 4.4e-22 109.0 59 78.0
BcaB05g23845 Brassica carinata HOM05D000471 ORTHO05D000199 1.7e-21 107.1 195 36.9
BcaC05g27767 Brassica carinata HOM05D000471 ORTHO05D015456 1.7e-21 107.1 57 78.9
BcaC05g28117 Brassica carinata HOM05D000471 ORTHO05D015456 3.7e-21 105.9 54 79.6
C02p47380 Brassica napus HOM05D000471 ORTHO05D000199 4.9e-21 105.5 63 69.8
BolC2t10781H Brassica oleracea HOM05D000471 ORTHO05D000199 4.9e-21 105.5 63 69.8
BcaC09g51281 Brassica carinata HOM05D000471 ORTHO05D015456 6.4e-21 105.1 59 76.3
BolC8t47761H Brassica oleracea HOM05D000471 ORTHO05D000199 6.4e-21 105.1 59 74.6
BcaC04g22313 Brassica carinata HOM05D000471 ORTHO05D015456 8.3e-21 104.8 59 76.3
BcaB08g35230 Brassica carinata HOM05D000471 ORTHO05D015456 7.1e-20 101.7 61 75.4
BcaB06g26768 Brassica carinata HOM05D000471 ORTHO05D000199 1.2e-19 100.9 169 41.4
BcaC07g37438 Brassica carinata HOM05D000471 ORTHO05D015456 7.8e-19 98.2 59 72.9
C03p67790 Brassica napus HOM05D000471 ORTHO05D015456 1.9e-17 93.6 58 69.0
BolSC21t60246H Brassica oleracea HOM05D000471 ORTHO05D015456 1.9e-17 93.6 58 69.0
BcaB08g37414 Brassica carinata HOM05D000471 ORTHO05D000199 5.2e-15 85.5 53 62.3
BcaC04g22065 Brassica carinata HOM05D000471 ORTHO05D000199 3.4e-14 82.8 52 65.4
BcaB08g34971 Brassica carinata HOM05D000471 ORTHO05D000199 5.8e-14 82.0 78 46.2
BolC6t37107H Brassica oleracea HOM05D000471 ORTHO05D013512 1.9e-12 77.0 75 45.3
C07p33570 Brassica napus HOM05D000471 ORTHO05D000199 4.6e-11 72.4 71 47.9
BolC1t02448H Brassica oleracea HOM05D000471 ORTHO05D000199 1.0e-10 71.2 66 51.5
C04p28660 Brassica napus HOM05D000471 ORTHO05D000199 1.7e-10 70.5 85 38.8
A09p44860 Brassica napus HOM05D000471 ORTHO05D000199 3.0e-10 69.7 77 44.2
A05p26660 Brassica napus HOM05D000471 ORTHO05D000199 3.9e-10 69.3 68 47.1
C01p25040 Brassica napus HOM05D000471 ORTHO05D000199 3.9e-10 69.3 78 43.6
BolC5t32495H Brassica oleracea HOM05D000471 ORTHO05D000199 6.6e-10 68.6 132 36.4
BolC7t43866H Brassica oleracea HOM05D000471 ORTHO05D000199 6.6e-10 68.6 71 46.5
BcaB04g17819 Brassica carinata HOM05D000471 ORTHO05D000199 1.5e-09 67.4 82 41.5
A05p09010 Brassica napus HOM05D000471 ORTHO05D000199 1.5e-09 67.4 66 47.0
BolC8t48263H Brassica oleracea HOM05D000471 ORTHO05D000199 1.5e-09 67.4 68 47.1
C02p34660 Brassica napus HOM05D000471 ORTHO05D000199 3.3e-09 66.2 65 46.2
C05p34790 Brassica napus HOM05D000471 ORTHO05D000199 3.3e-09 66.2 65 46.2
BcaC09g49282 Brassica carinata HOM05D000471 ORTHO05D024295 4.3e-09 65.9 80 38.8
C04p20310 Brassica napus HOM05D000471 ORTHO05D000199 7.3e-09 65.1 64 48.4
BcaC06g35815 Brassica carinata HOM05D000471 ORTHO05D000199 9.6e-09 64.7 60 48.3
C05p33730 Brassica napus HOM05D000471 ORTHO05D000199 9.6e-09 64.7 63 44.4
A03p66800 Brassica napus HOM05D000471 ORTHO05D000199 1.6e-08 63.9 67 44.8
C01p37480 Brassica napus HOM05D000471 ORTHO05D000199 2.1e-08 63.5 91 37.4
BcaC05g27721 Brassica carinata HOM05D000471 ORTHO05D024295 2.8e-08 63.2 60 41.7
C02p43170 Brassica napus HOM05D000471 ORTHO05D000199 2.8e-08 63.2 68 45.6
C03p70580 Brassica napus HOM05D000471 ORTHO05D000199 2.8e-08 63.2 76 43.4
BolC5t32312H Brassica oleracea HOM05D000471 ORTHO05D000199 2.8e-08 63.2 82 42.7
C06p05070 Brassica napus HOM05D000471 ORTHO05D000199 3.6e-08 62.8 63 42.9
C06p16800 Brassica napus HOM05D000471 ORTHO05D000199 3.6e-08 62.8 60 50.0
C09p09790 Brassica napus HOM05D000471 ORTHO05D000199 3.6e-08 62.8 63 42.9
BolC1t03718H Brassica oleracea HOM05D000471 ORTHO05D000199 3.6e-08 62.8 155 31.0
BolC6t36878H Brassica oleracea HOM05D000471 ORTHO05D000199 3.6e-08 62.8 60 50.0
C02p16660 Brassica napus HOM05D000471 ORTHO05D000199 4.7e-08 62.4 81 39.5
C08p08800 Brassica napus HOM05D000471 ORTHO05D000199 4.7e-08 62.4 63 42.9
BolC1t02484H Brassica oleracea HOM05D000471 ORTHO05D000199 4.7e-08 62.4 87 39.1
BolC3t19089H Brassica oleracea HOM05D000471 ORTHO05D000199 4.7e-08 62.4 85 41.2
BcaC04g22420 Brassica carinata HOM05D000471 ORTHO05D000199 6.2e-08 62.0 82 37.8
BolC8t48158H Brassica oleracea HOM05D000471 ORTHO05D000199 6.2e-08 62.0 84 39.3
BraA05t21071Z Brassica rapa HOM05D000471 ORTHO05D000199 6.2e-08 62.0 76 43.4
BraSC36t46070Z Brassica rapa HOM05D000471 ORTHO05D000199 6.2e-08 62.0 80 40.0
C03p23820 Brassica napus HOM05D000471 ORTHO05D000199 8.1e-08 61.6 81 40.7
C05p42130 Brassica napus HOM05D000471 ORTHO05D000199 8.1e-08 61.6 76 42.1
C09p23420 Brassica napus HOM05D000471 ORTHO05D000199 8.1e-08 61.6 76 40.8
BolC3t19021H Brassica oleracea HOM05D000471 ORTHO05D000199 8.1e-08 61.6 76 42.1
BolC6t35529H Brassica oleracea HOM05D000471 ORTHO05D000199 8.1e-08 61.6 83 41.0
BolC6t38315H Brassica oleracea HOM05D000471 ORTHO05D000199 8.1e-08 61.6 76 42.1
BolC9t55148H Brassica oleracea HOM05D000471 ORTHO05D012338 8.1e-08 61.6 80 41.2
BolC9t55262H Brassica oleracea HOM05D000471 ORTHO05D000199 8.1e-08 61.6 76 40.8
BolC1t02994H Brassica oleracea HOM05D000471 ORTHO05D000199 1.4e-07 60.8 63 46.0
BolC3t19328H Brassica oleracea HOM05D000471 ORTHO05D000199 1.4e-07 60.8 76 42.1
BolC8t46987H Brassica oleracea HOM05D000471 ORTHO05D000199 1.4e-07 60.8 81 39.5
C03p52280 Brassica napus HOM05D000471 ORTHO05D000199 1.8e-07 60.5 82 39.0
C06p16710 Brassica napus HOM05D000471 ORTHO05D000199 1.8e-07 60.5 73 45.2
C08p22850 Brassica napus HOM05D000471 ORTHO05D000199 1.8e-07 60.5 85 40.0
BolC2t10745H Brassica oleracea HOM05D000471 ORTHO05D000199 1.8e-07 60.5 76 42.1
C02p59580 Brassica napus HOM05D000471 ORTHO05D024295 2.4e-07 60.1 60 40.0
BolC2t11172H Brassica oleracea HOM05D000471 ORTHO05D000199 2.4e-07 60.1 85 40.0
BolC2t12021H Brassica oleracea HOM05D000471 ORTHO05D024295 2.4e-07 60.1 60 40.0
BolC9t56743H Brassica oleracea HOM05D000471 ORTHO05D000199 2.4e-07 60.1 76 42.1
C04p33860 Brassica napus HOM05D000471 ORTHO05D013512 3.1e-07 59.7 93 36.6
C09p54740 Brassica napus HOM05D000471 ORTHO05D000199 3.1e-07 59.7 75 41.3
BolC5t31657H Brassica oleracea HOM05D000471 ORTHO05D000199 3.1e-07 59.7 73 39.7
BolC7t41823H Brassica oleracea HOM05D000471 ORTHO05D000199 3.1e-07 59.7 83 39.8
C01p14860 Brassica napus HOM05D000471 ORTHO05D015456 4.0e-07 59.3 37 62.2
C08p20240 Brassica napus HOM05D000471 ORTHO05D000199 4.0e-07 59.3 73 42.5
C09p51680 Brassica napus HOM05D000471 ORTHO05D000199 4.0e-07 59.3 83 38.6
C09p57010 Brassica napus HOM05D000471 ORTHO05D000199 4.0e-07 59.3 71 45.1
BolC2t10008H Brassica oleracea HOM05D000471 ORTHO05D000199 4.0e-07 59.3 75 40.0
BolC6t39382H Brassica oleracea HOM05D000471 ORTHO05D000199 4.0e-07 59.3 67 43.3
BolC1t02540H Brassica oleracea HOM05D000471 ORTHO05D000199 5.3e-07 58.9 76 40.8
A08p30620 Brassica napus HOM05D000471 ORTHO05D000199 9.0e-07 58.2 72 38.9
A09p30150 Brassica napus HOM05D000471 ORTHO05D000199 9.0e-07 58.2 80 36.2
C01p28620 Brassica napus HOM05D000471 ORTHO05D000199 9.0e-07 58.2 73 41.1
C04p44230 Brassica napus HOM05D000471 ORTHO05D000199 9.0e-07 58.2 73 42.5
BolC8t47965H Brassica oleracea HOM05D000471 ORTHO05D000199 9.0e-07 58.2 81 38.3
C01p38110 Brassica napus HOM05D000471 ORTHO05D000199 1.2e-06 57.8 72 43.1
C04p46520 Brassica napus HOM05D000471 ORTHO05D000199 1.2e-06 57.8 81 37.0
BolC9t56468H Brassica oleracea HOM05D000471 ORTHO05D000199 1.2e-06 57.8 67 43.3
C08p09090 Brassica napus HOM05D000471 ORTHO05D000199 1.5e-06 57.4 76 40.8
C09p59300 Brassica napus HOM05D000471 ORTHO05D000199 1.5e-06 57.4 80 35.0
BolC3t17480H Brassica oleracea HOM05D000471 ORTHO05D000199 1.5e-06 57.4 74 37.8
BolC9t58069H Brassica oleracea HOM05D000471 ORTHO05D000199 1.5e-06 57.4 63 44.4
A05p21420 Brassica napus HOM05D000471 ORTHO05D042818 2.0e-06 57.0 82 34.1
C02p40760 Brassica napus HOM05D000471 ORTHO05D000199 2.0e-06 57.0 73 41.1
C06p17040 Brassica napus HOM05D000471 ORTHO05D024295 2.0e-06 57.0 100 35.0
C09p23700 Brassica napus HOM05D000471 ORTHO05D000199 2.0e-06 57.0 64 42.2
C09p44320 Brassica napus HOM05D000471 ORTHO05D000199 2.0e-06 57.0 81 37.0
C09p54980 Brassica napus HOM05D000471 ORTHO05D012338 2.0e-06 57.0 81 38.3
BolC3t18324H Brassica oleracea HOM05D000471 ORTHO05D000199 2.0e-06 57.0 55 47.3
BolC3t20378H Brassica oleracea HOM05D000471 ORTHO05D000199 2.0e-06 57.0 73 39.7
BolC7t42174H Brassica oleracea HOM05D000471 ORTHO05D000199 2.0e-06 57.0 55 47.3
BolC8t47341H Brassica oleracea HOM05D000471 ORTHO05D000199 2.0e-06 57.0 156 31.4
BraA05t21051Z Brassica rapa HOM05D000471 ORTHO05D042818 2.0e-06 57.0 82 34.1
A07p40940 Brassica napus HOM05D000471 ORTHO05D000199 2.6e-06 56.6 72 38.9
C05p37350 Brassica napus HOM05D000471 ORTHO05D012338 2.6e-06 56.6 73 39.7
BraA05t21209Z Brassica rapa HOM05D000471 ORTHO05D000199 2.6e-06 56.6 82 35.4
A10p14660 Brassica napus HOM05D000471 ORTHO05D000199 3.4e-06 56.2 55 45.5
BolC3t18903H Brassica oleracea HOM05D000471 ORTHO05D000199 3.4e-06 56.2 71 39.4
BraA02t07702Z Brassica rapa HOM05D000471 ORTHO05D000199 3.4e-06 56.2 53 45.3
C07p11250 Brassica napus HOM05D000471 ORTHO05D000199 4.4e-06 55.8 74 40.5
BolC1t01861H Brassica oleracea HOM05D000471 ORTHO05D000199 4.4e-06 55.8 72 38.9
Sp5g17020 Schrenkiella parvula HOM05D003739 ORTHO05D003996 4.4e-06 55.8 64 42.2
BcaC07g37770 Brassica carinata HOM05D000471 ORTHO05D000199 5.8e-06 55.5 70 38.6
BcaC09g49305 Brassica carinata HOM05D000471 ORTHO05D000199 5.8e-06 55.5 68 41.2
BolC7t41220H Brassica oleracea HOM05D000471 ORTHO05D000199 5.8e-06 55.5 77 35.1
BcaB01g01421 Brassica carinata HOM05D000471 ORTHO05D000199 7.6e-06 55.1 58 44.8
C04p48490 Brassica napus HOM05D000471 ORTHO05D000199 7.6e-06 55.1 81 35.8
BcaC08g44729 Brassica carinata HOM05D000471 ORTHO05D000199 9.9e-06 54.7 54 44.4


User provided reference genes

Program Settings