Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g23791 Brassica carinata HOM05D001224 ORTHO05D010571 4.6e-91 337.8 164 100.0
BcaB06g27207 Brassica carinata HOM05D001224 ORTHO05D019989 4.1e-55 218.4 123 83.7
BcaB01g02585 Brassica carinata HOM05D001224 ORTHO05D000395 7.8e-46 187.6 123 74.8
BraA03t15283Z Brassica rapa HOM05D001224 ORTHO05D010571 1.1e-44 183.7 135 65.9
C07p01220 Brassica napus HOM05D001224 ORTHO05D010571 1.6e-43 179.9 135 64.4
C02p15640 Brassica napus HOM05D001224 ORTHO05D010571 1.4e-42 176.8 135 63.0
A01p25420 Brassica napus HOM05D001224 ORTHO05D014478 1.8e-42 176.4 135 62.2
BcaC02g09037 Brassica carinata HOM05D001224 ORTHO05D014478 4.0e-42 175.3 135 62.2
BcaC08g43834 Brassica carinata HOM05D001224 ORTHO05D014478 4.0e-42 175.3 135 63.0
A08p08810 Brassica napus HOM05D001224 ORTHO05D010571 5.2e-42 174.9 123 66.7
C05p37780 Brassica napus HOM05D001224 ORTHO05D010571 5.2e-42 174.9 135 62.2
BcaC05g27783 Brassica carinata HOM05D001224 ORTHO05D000395 6.8e-42 174.5 139 60.4
C03p58300 Brassica napus HOM05D001224 ORTHO05D010571 6.8e-42 174.5 135 62.2
BcaC01g02927 Brassica carinata HOM05D001224 ORTHO05D014478 1.2e-41 173.7 135 62.2
BcaC06g36171 Brassica carinata HOM05D001224 ORTHO05D014478 1.2e-41 173.7 135 62.2
C05p36130 Brassica napus HOM05D001224 ORTHO05D010571 1.2e-41 173.7 135 62.2
C05p44360 Brassica napus HOM05D001224 ORTHO05D014478 1.2e-41 173.7 136 63.2
BolC5t33158H Brassica oleracea HOM05D001224 ORTHO05D010571 1.2e-41 173.7 136 63.2
C01p45400 Brassica napus HOM05D001224 ORTHO05D010571 1.5e-41 173.3 123 65.9
BolC8t47204H Brassica oleracea HOM05D001224 ORTHO05D010571 2.0e-41 172.9 135 61.5
BcaC05g26849 Brassica carinata HOM05D001224 ORTHO05D014478 4.4e-41 171.8 135 61.5
C01p48020 Brassica napus HOM05D001224 ORTHO05D010571 4.4e-41 171.8 135 61.5
BolC7t41307H Brassica oleracea HOM05D001224 ORTHO05D010571 5.8e-41 171.4 136 62.5
BcaC07g37040 Brassica carinata HOM05D001224 ORTHO05D010571 7.5e-41 171.0 135 60.7
BcaC05g27135 Brassica carinata HOM05D001224 ORTHO05D010571 9.8e-41 170.6 135 60.7
C05p30230 Brassica napus HOM05D001224 ORTHO05D010571 9.8e-41 170.6 135 60.7
BcaC02g11120 Brassica carinata HOM05D001224 ORTHO05D010571 1.3e-40 170.2 123 64.2
C01p41550 Brassica napus HOM05D001224 ORTHO05D010571 1.3e-40 170.2 135 60.0
BcaC02g12294 Brassica carinata HOM05D001224 ORTHO05D014478 2.9e-40 169.1 135 61.5
C04p05530 Brassica napus HOM05D001224 ORTHO05D010571 2.9e-40 169.1 135 61.5
BcaC08g44195 Brassica carinata HOM05D001224 ORTHO05D014478 4.9e-40 168.3 128 63.3
C06p04810 Brassica napus HOM05D001224 ORTHO05D010571 4.9e-40 168.3 135 60.0
BcaB02g11463 Brassica carinata HOM05D001224 ORTHO05D000309 1.4e-39 166.8 149 55.7
BolC5t30546H Brassica oleracea HOM05D001224 ORTHO05D010571 1.4e-39 166.8 140 58.6
BcaB07g33904 Brassica carinata HOM05D001224 ORTHO05D003044 2.0e-38 162.9 175 51.4
BcaC03g17086 Brassica carinata HOM05D001224 ORTHO05D010571 2.0e-38 162.9 123 62.6
A10p08880 Brassica napus HOM05D001224 ORTHO05D010571 3.5e-38 162.2 135 60.7
BcaB05g24223 Brassica carinata HOM05D001224 ORTHO05D019989 4.0e-34 148.7 123 62.6
BcaB01g01037 Brassica carinata HOM05D001224 ORTHO05D010571 1.3e-32 143.7 134 53.7
BcaB05g24508 Brassica carinata HOM05D001224 ORTHO05D000309 1.3e-32 143.7 107 61.7
BcaB06g26681 Brassica carinata HOM05D001224 ORTHO05D016739 6.4e-32 141.4 126 56.3
BcaC05g28451 Brassica carinata HOM05D001224 ORTHO05D014478 7.0e-31 137.9 135 52.6
BcaB04g18242 Brassica carinata HOM05D001224 ORTHO05D010571 7.8e-30 134.4 89 75.3
BcaB05g22948 Brassica carinata HOM05D001224 ORTHO05D010571 2.3e-29 132.9 112 58.9
BolC5t31762H Brassica oleracea HOM05D001224 ORTHO05D010571 6.6e-29 131.3 94 66.0
BcaB08g35070 Brassica carinata HOM05D001224 ORTHO05D010571 1.1e-28 130.6 155 49.0
BcaB05g22878 Brassica carinata HOM05D001224 ORTHO05D018563 1.9e-28 129.8 112 57.1
BcaB04g16976 Brassica carinata HOM05D001224 ORTHO05D016074 1.2e-25 120.6 91 65.9
BcaB02g11218 Brassica carinata HOM05D001224 ORTHO05D010571 2.6e-25 119.4 168 44.0
BcaB06g25741 Brassica carinata HOM05D001224 ORTHO05D016074 4.9e-24 115.2 129 47.3
BcaB05g24682 Brassica carinata HOM05D001224 ORTHO05D016074 1.1e-23 114.0 114 48.2
BcaB01g01183 Brassica carinata HOM05D001224 ORTHO05D019989 2.4e-23 112.8 108 57.4
BcaB08g35078 Brassica carinata HOM05D001224 ORTHO05D016074 3.2e-23 112.5 127 44.9
C07p06970 Brassica napus HOM05D001224 ORTHO05D010571 3.2e-23 112.5 82 64.6
C07p08920 Brassica napus HOM05D001224 ORTHO05D010571 3.5e-22 109.0 137 46.0
BcaC05g27629 Brassica carinata HOM05D001224 ORTHO05D010571 6.0e-22 108.2 82 64.6
BcaB06g26650 Brassica carinata HOM05D001224 ORTHO05D010571 2.3e-21 106.3 124 46.8
BcaB04g17592 Brassica carinata HOM05D001224 ORTHO05D016074 7.3e-20 101.3 80 63.8
BcaC06g35617 Brassica carinata HOM05D001224 ORTHO05D016739 7.3e-20 101.3 148 39.9
BcaB06g27850 Brassica carinata HOM05D001224 ORTHO05D016074 1.2e-19 100.5 84 58.3
BcaC07g37922 Brassica carinata HOM05D001224 ORTHO05D016739 1.2e-19 100.5 148 39.2
BraA01t01571Z Brassica rapa HOM05D000675 ORTHO05D000395 1.8e-18 96.7 70 62.9
BcaC09g48604 Brassica carinata HOM05D001224 ORTHO05D018692 3.1e-18 95.9 92 54.3
BcaB08g35157 Brassica carinata HOM05D001224 ORTHO05D010571 8.9e-18 94.4 107 48.6
BcaB06g26317 Brassica carinata HOM05D001224 ORTHO05D010571 1.5e-17 93.6 95 52.6
BcaB04g17772 Brassica carinata HOM05D001224 ORTHO05D010571 3.4e-17 92.4 88 53.4
BcaB07g33162 Brassica carinata HOM05D012943 ORTHO05D010571 7.6e-17 91.3 120 41.7
C07p01190 Brassica napus HOM05D001224 ORTHO05D000395 9.9e-17 90.9 71 62.0
C07p12920 Brassica napus HOM05D001224 ORTHO05D016739 1.4e-15 87.0 127 40.2
BolC4t26388H Brassica oleracea HOM05D001224 ORTHO05D000395 2.4e-15 86.3 55 72.7
C09p42330 Brassica napus HOM05D001224 ORTHO05D012331 3.2e-15 85.9 125 39.2
C01p38730 Brassica napus HOM05D001224 ORTHO05D012331 5.4e-15 85.1 125 38.4
BcaB06g26645 Brassica carinata HOM05D001224 ORTHO05D010571 9.2e-15 84.3 107 39.3
BolC1t04759H Brassica oleracea HOM05D001224 ORTHO05D010571 7.8e-14 81.3 53 71.7
A09p21550 Brassica napus HOM05D023185 ORTHO05D012331 1.0e-13 80.9 125 36.0
BraA09t37754Z Brassica rapa HOM05D001224 ORTHO05D012331 1.0e-13 80.9 125 36.0
C07p13910 Brassica napus HOM05D001224 ORTHO05D012331 1.7e-13 80.1 125 37.6
BraSC37t46113Z Brassica rapa HOM05D000675 ORTHO05D000395 3.0e-13 79.3 63 65.1
BolC4t23819H Brassica oleracea HOM05D002776 ORTHO05D000395 5.1e-13 78.6 118 41.5
C03p64930 Brassica napus HOM05D002776 ORTHO05D000395 1.9e-12 76.6 118 35.6
BcaB06g25737 Brassica carinata HOM05D001224 ORTHO05D016074 7.3e-12 74.7 65 56.9
BcaC02g09920 Brassica carinata HOM05D001224 ORTHO05D014478 7.3e-12 74.7 135 38.5
BcaB03g16625 Brassica carinata HOM05D001224 ORTHO05D095114 1.2e-11 73.9 90 47.8
BcaB02g11183 Brassica carinata HOM05D001224 ORTHO05D016074 1.8e-10 70.1 84 44.0
BcaB04g17705 Brassica carinata HOM05D001224 ORTHO05D016074 2.4e-10 69.7 56 60.7
C04p09720 Brassica napus HOM05D001224 ORTHO05D016111 6.9e-10 68.2 136 35.3
C04p55410 Brassica napus HOM05D001224 ORTHO05D010571 9.0e-10 67.8 38 81.6
BcaB04g17782 Brassica carinata HOM05D012943 ORTHO05D091829 3.8e-08 62.4 77 46.8
A09p32050 Brassica napus HOM05D001224 ORTHO05D016111 1.1e-07 60.8 116 34.5
C03p68610 Brassica napus HOM05D000675 ORTHO05D000395 2.4e-07 59.7 79 41.8
BolC3t19120H Brassica oleracea HOM05D000675 ORTHO05D000395 2.4e-07 59.7 79 41.8
BraA01t02478Z Brassica rapa HOM05D001224 ORTHO05D010571 2.4e-07 59.7 35 80.0
BcaB03g16206 Brassica carinata HOM05D001224 ORTHO05D010571 3.2e-07 59.3 139 32.4
BcaC04g19844 Brassica carinata HOM05D001224 ORTHO05D012331 5.4e-07 58.5 125 28.8
C07p11380 Brassica napus HOM05D001379 ORTHO05D012331 2.1e-06 56.6 91 37.4
BolC3t18754H Brassica oleracea HOM05D002776 ORTHO05D000395 2.1e-06 56.6 110 29.1


User provided reference genes

Program Settings