Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g23768 Brassica carinata HOM05D003103 ORTHO05D091674 9.7e-138 493.4 240 100.0
BcaB07g33436 Brassica carinata HOM05D003103 ORTHO05D090911 2.5e-37 159.8 198 52.0
BcaB07g33158 Brassica carinata HOM05D050361 ORTHO05D091671 1.4e-24 117.5 59 93.2
AT2G23420 Arabidopsis thaliana HOM05D003103 ORTHO05D003999 9.4e-08 61.6 42 69.0
A09p56930 Brassica napus HOM05D003103 ORTHO05D003999 9.4e-08 61.6 42 69.0
BraA09t41085Z Brassica rapa HOM05D003103 ORTHO05D003999 9.4e-08 61.6 42 69.0
Carub.0004s0262 Capsella rubella HOM05D003103 ORTHO05D003999 9.4e-08 61.6 42 69.0
CARHR293030 Cardamine hirsuta HOM05D003103 ORTHO05D003999 9.4e-08 61.6 42 69.0
Thhalv10000109m.g Eutrema salsugineum HOM05D003103 ORTHO05D003999 9.4e-08 61.6 42 69.0
Sp4g02410 Schrenkiella parvula HOM05D003103 ORTHO05D003999 9.4e-08 61.6 42 69.0
THA.LOC104819846 Tarenaya hassleriana HOM05D003103 ORTHO05D003999 9.4e-08 61.6 42 69.0
BcaC07g40987 Brassica carinata HOM05D003103 ORTHO05D003999 2.1e-07 60.5 42 66.7
C08p39890 Brassica napus HOM05D003103 ORTHO05D003999 2.1e-07 60.5 42 66.7
BolC8t51562H Brassica oleracea HOM05D003103 ORTHO05D003999 2.1e-07 60.5 42 66.7
Aa31LG6G14040 Aethionema arabicum HOM05D003103 ORTHO05D003999 2.7e-07 60.1 42 66.7
unitig_747.g21724 Utricularia gibba HOM05D003545 ORTHO05D004720 2.7e-07 60.1 37 70.3
Aa31LG7G13580 Aethionema arabicum HOM05D003103 ORTHO05D003999 3.6e-07 59.7 42 66.7
AL7G13700 Arabidopsis lyrata HOM05D003103 ORTHO05D003999 4.7e-07 59.3 42 66.7
AT4G36940 Arabidopsis thaliana HOM05D003103 ORTHO05D003999 4.7e-07 59.3 42 66.7
Carub.0007s0312 Capsella rubella HOM05D003103 ORTHO05D003999 4.7e-07 59.3 42 66.7
CARHR245570 Cardamine hirsuta HOM05D003103 ORTHO05D003999 4.7e-07 59.3 42 66.7
Sp7g34830 Schrenkiella parvula HOM05D003103 ORTHO05D003999 4.7e-07 59.3 42 66.7
BcaNung05429 Brassica carinata HOM05D003103 ORTHO05D003999 6.1e-07 58.9 42 64.3
A03p64960 Brassica napus HOM05D003103 ORTHO05D003999 6.1e-07 58.9 42 64.3
C07p62250 Brassica napus HOM05D003103 ORTHO05D003999 6.1e-07 58.9 42 64.3
BolC7t46641H Brassica oleracea HOM05D003103 ORTHO05D003999 6.1e-07 58.9 42 64.3
BraA03t15555Z Brassica rapa HOM05D003103 ORTHO05D003999 6.1e-07 58.9 42 64.3
Thhalv10024704m.g Eutrema salsugineum HOM05D003103 ORTHO05D003999 8.0e-07 58.5 42 66.7
AL4G13330 Arabidopsis lyrata HOM05D003103 ORTHO05D003999 2.3e-06 57.0 42 66.7
Cpa.g.sc55.133 Carica papaya HOM05D003103 ORTHO05D003999 3.9e-06 56.2 42 57.1
Os04g0429800 Oryza sativa ssp. japonica HOM05D003103 ORTHO05D003999 3.9e-06 56.2 56 50.0
AUR62001914 Chenopodium quinoa HOM05D003103 ORTHO05D003999 5.2e-06 55.8 89 41.6
AUR62003895 Chenopodium quinoa HOM05D003103 ORTHO05D003999 5.2e-06 55.8 89 41.6
BcaC03g16226 Brassica carinata HOM05D003545 ORTHO05D011382 8.8e-06 55.1 33 78.8
C07p11630 Brassica napus HOM05D003545 ORTHO05D032500 8.8e-06 55.1 32 75.0
Lsat_1_v5_gn_3_89301 Lactuca sativa HOM05D003103 ORTHO05D003999 8.8e-06 55.1 42 61.9


User provided reference genes

Program Settings