Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g23728 Brassica carinata HOM05D009238 ORTHO05D012489 8.3e-288 993.0 514 100.0
BcaC01g06924 Brassica carinata HOM05D000496 ORTHO05D000411 5.6e-58 229.6 684 32.3
BcaB04g17452 Brassica carinata HOM05D009238 ORTHO05D019868 8.1e-49 199.1 529 32.7
BraA02t08674Z Brassica rapa HOM05D009238 ORTHO05D012489 2.3e-43 181.0 452 33.4
BcaC09g49165 Brassica carinata HOM05D000032 ORTHO05D000925 5.6e-42 176.4 368 35.6
BcaC07g39368 Brassica carinata HOM05D009238 ORTHO05D012489 7.3e-42 176.0 305 39.0
BcaB03g15929 Brassica carinata HOM05D000496 ORTHO05D000411 1.2e-41 175.3 465 31.6
BraA04t16367Z Brassica rapa HOM05D009238 ORTHO05D012489 5.2e-40 169.9 327 36.4
C06p11850 Brassica napus HOM05D009238 ORTHO05D012489 3.4e-39 167.2 448 32.1
BcaC03g16856 Brassica carinata HOM05D009238 ORTHO05D019868 1.7e-38 164.9 299 37.1
A04p06620 Brassica napus HOM05D009238 ORTHO05D012489 1.2e-36 158.7 348 34.2
BraA03t12194Z Brassica rapa HOM05D009238 ORTHO05D012489 1.3e-30 138.7 281 38.4
BcaC08g47032 Brassica carinata HOM05D009238 ORTHO05D012489 7.9e-28 129.4 258 39.1
BolC2t07633H Brassica oleracea HOM05D009238 ORTHO05D019868 7.9e-28 129.4 269 37.2
BolC8t49470H Brassica oleracea HOM05D009238 ORTHO05D019868 2.6e-23 114.4 359 28.4
BolC2t08494H Brassica oleracea HOM05D009238 ORTHO05D012489 1.3e-22 112.1 163 39.3
BolC6t38778H Brassica oleracea HOM05D009238 ORTHO05D012489 1.3e-22 112.1 320 31.6
C03p47070 Brassica napus HOM05D016815 ORTHO05D020093 1.9e-21 108.2 378 29.1
BraA01t01668Z Brassica rapa HOM05D009238 ORTHO05D019868 9.3e-21 105.9 359 27.9
BcaC01g01482 Brassica carinata HOM05D009238 ORTHO05D021611 1.6e-20 105.1 266 36.1
BolC6t37993H Brassica oleracea HOM05D005254 ORTHO05D012489 6.7e-19 99.8 243 36.6
BraA03t13842Z Brassica rapa HOM05D009238 ORTHO05D020093 1.1e-18 99.0 217 36.4
C06p15150 Brassica napus HOM05D016815 ORTHO05D020093 2.1e-17 94.7 349 27.5
BolC6t36689H Brassica oleracea HOM05D016815 ORTHO05D020093 2.1e-17 94.7 349 27.5
A10p16820 Brassica napus HOM05D016815 ORTHO05D012489 2.8e-17 94.4 295 34.2
BcaB01g02479 Brassica carinata HOM05D000496 ORTHO05D000411 6.2e-17 93.2 450 25.1
BcaC06g33741 Brassica carinata HOM05D000496 ORTHO05D000411 4.0e-16 90.5 257 31.5
C02p47500 Brassica napus HOM05D009238 ORTHO05D019868 1.2e-15 89.0 327 27.8
BcaC01g02173 Brassica carinata HOM05D001239 ORTHO05D017499 3.4e-15 87.4 350 28.3
BolC9t59809H Brassica oleracea HOM05D016815 ORTHO05D012489 1.0e-14 85.9 243 32.5
BcaC02g12210 Brassica carinata HOM05D000003 ORTHO05D000925 2.5e-13 81.3 387 26.4
BolC4t26060H Brassica oleracea HOM05D009238 ORTHO05D012489 1.2e-12 79.0 135 40.0
BcaC02g09623 Brassica carinata HOM05D002743 ORTHO05D002895 4.6e-12 77.0 142 38.0
BolC2t10791H Brassica oleracea HOM05D009238 ORTHO05D019868 6.0e-12 76.6 125 37.6
BcaC02g11658 Brassica carinata HOM05D014076 ORTHO05D021903 1.3e-11 75.5 195 32.3
BolC2t08478H Brassica oleracea HOM05D001239 ORTHO05D024427 1.3e-11 75.5 218 28.0
BcaC04g19167 Brassica carinata HOM05D000496 ORTHO05D000411 5.1e-11 73.6 238 27.7
BcaC07g40131 Brassica carinata HOM05D014076 ORTHO05D000006 6.7e-11 73.2 199 32.2
C05p11830 Brassica napus HOM05D001239 ORTHO05D033080 8.7e-11 72.8 213 30.5
C08p07070 Brassica napus HOM05D001239 ORTHO05D024427 8.7e-11 72.8 188 28.7
BcaC06g36045 Brassica carinata HOM05D000496 ORTHO05D000411 1.1e-10 72.4 372 25.5
A01p18960 Brassica napus HOM05D014076 ORTHO05D021903 1.5e-10 72.0 198 30.8
BolC5t30244H Brassica oleracea HOM05D001239 ORTHO05D011709 1.5e-10 72.0 338 26.0
BcaB07g30912 Brassica carinata HOM05D000496 ORTHO05D000411 1.9e-10 71.6 237 34.2
BcaC01g00485 Brassica carinata HOM05D000496 ORTHO05D000411 2.5e-10 71.2 223 29.1
C02p30810 Brassica napus HOM05D009238 ORTHO05D012489 2.5e-10 71.2 145 33.1
BraA01t01837Z Brassica rapa HOM05D014076 ORTHO05D021903 3.3e-10 70.9 273 28.6
BraA09t38239Z Brassica rapa HOM05D014076 ORTHO05D021903 4.3e-10 70.5 197 31.5
BolC1t05632H Brassica oleracea HOM05D014076 ORTHO05D021903 7.4e-10 69.7 200 32.0
BolC6t35761H Brassica oleracea HOM05D016815 ORTHO05D012489 1.3e-09 68.9 159 32.7
BolC6t35760H Brassica oleracea HOM05D023674 ORTHO05D033661 2.1e-09 68.2 129 35.7
BolC7t40747H Brassica oleracea HOM05D001239 ORTHO05D027739 2.8e-09 67.8 228 30.3
BcaC08g45870 Brassica carinata HOM05D000496 ORTHO05D000411 3.7e-09 67.4 57 59.6
A02p36830 Brassica napus HOM05D009238 ORTHO05D012489 6.3e-09 66.6 72 52.8
C09p42620 Brassica napus HOM05D001239 ORTHO05D011709 8.2e-09 66.2 238 29.0
BcaB07g32141 Brassica carinata HOM05D000496 ORTHO05D000411 2.4e-08 64.7 211 28.0
BcaB01g01785 Brassica carinata HOM05D000496 ORTHO05D000925 9.0e-08 62.8 201 31.3
BcaC04g21866 Brassica carinata HOM05D011670 ORTHO05D012489 9.0e-08 62.8 149 34.2
BcaC07g36896 Brassica carinata HOM05D004566 ORTHO05D000925 1.2e-07 62.4 140 33.6
BcaB01g02634 Brassica carinata HOM05D000496 ORTHO05D000411 1.5e-07 62.0 200 30.0
BcaC09g49677 Brassica carinata HOM05D000496 ORTHO05D011709 1.5e-07 62.0 203 30.0
BolC4t26715H Brassica oleracea HOM05D001239 ORTHO05D011709 2.0e-07 61.6 193 33.7
BcaB04g17991 Brassica carinata HOM05D000496 ORTHO05D000411 2.6e-07 61.2 68 51.5
C04p60320 Brassica napus HOM05D011670 ORTHO05D027357 2.6e-07 61.2 124 36.3
C05p09640 Brassica napus HOM05D011670 ORTHO05D027357 2.6e-07 61.2 124 36.3
BolC2t10713H Brassica oleracea HOM05D001239 ORTHO05D011709 2.6e-07 61.2 217 30.4
BcaC02g09195 Brassica carinata HOM05D001239 ORTHO05D031919 1.3e-06 58.9 57 56.1
BcaB06g25898 Brassica carinata HOM05D011670 ORTHO05D012489 1.7e-06 58.5 220 29.5
BcaC09g51060 Brassica carinata HOM05D000496 ORTHO05D000411 1.7e-06 58.5 56 53.6
C03p67910 Brassica napus HOM05D001239 ORTHO05D017499 2.2e-06 58.2 191 31.4
BraA04t17766Z Brassica rapa HOM05D001239 ORTHO05D024427 2.2e-06 58.2 150 30.0
BcaC04g22514 Brassica carinata HOM05D001239 ORTHO05D027739 3.8e-06 57.4 413 25.9
BcaB06g28487 Brassica carinata HOM05D011670 ORTHO05D027357 5.0e-06 57.0 105 38.1
BcaC08g45061 Brassica carinata HOM05D000496 ORTHO05D000411 5.0e-06 57.0 33 81.8
C03p49160 Brassica napus HOM05D014076 ORTHO05D024532 5.0e-06 57.0 256 27.7
BolC4t27724H Brassica oleracea HOM05D007244 ORTHO05D027097 5.0e-06 57.0 371 27.0
BcaC04g22862 Brassica carinata HOM05D000496 ORTHO05D000411 8.5e-06 56.2 182 29.7
BcaC07g39656 Brassica carinata HOM05D000722 ORTHO05D000590 8.5e-06 56.2 90 37.8


User provided reference genes

Program Settings