Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g23725 Brassica carinata HOM05D004342 ORTHO05D011040 4.5e-146 521.2 247 100.0
BcaB07g32852 Brassica carinata HOM05D004342 ORTHO05D011040 4.0e-131 471.5 255 89.8
BcaB05g23589 Brassica carinata HOM05D004342 ORTHO05D011040 1.8e-115 419.5 270 78.5
BcaB03g16647 Brassica carinata HOM05D004342 ORTHO05D011040 3.2e-112 408.7 266 76.7
C04p46690 Brassica napus HOM05D004342 ORTHO05D011040 4.2e-112 408.3 262 74.8
BcaB08g35473 Brassica carinata HOM05D004342 ORTHO05D011040 2.1e-111 406.0 266 76.7
BcaC03g15908 Brassica carinata HOM05D004342 ORTHO05D011040 2.1e-111 406.0 262 75.6
BcaB01g01402 Brassica carinata HOM05D004342 ORTHO05D011040 1.1e-109 400.2 266 76.3
C04p26830 Brassica napus HOM05D004342 ORTHO05D011040 3.1e-107 392.1 262 73.3
BolC4t26257H Brassica oleracea HOM05D004342 ORTHO05D011040 1.2e-106 390.2 273 70.0
BraA02t07939Z Brassica rapa HOM05D004342 ORTHO05D107931 1.2e-106 390.2 273 70.3
BcaC04g19377 Brassica carinata HOM05D004342 ORTHO05D011040 2.5e-104 382.5 263 73.0
C09p56360 Brassica napus HOM05D004342 ORTHO05D011040 2.5e-104 382.5 262 72.9
BolC4t24121H Brassica oleracea HOM05D004342 ORTHO05D011040 4.2e-104 381.7 273 70.0
BcaB08g35285 Brassica carinata HOM05D004342 ORTHO05D011040 1.4e-102 376.7 264 70.1
BcaB01g02102 Brassica carinata HOM05D004342 ORTHO05D011040 2.6e-101 372.5 264 69.3
BcaB06g27914 Brassica carinata HOM05D004342 ORTHO05D011040 9.7e-101 370.5 265 69.4
BcaC05g27753 Brassica carinata HOM05D004342 ORTHO05D032754 1.3e-100 370.2 247 72.5
BolC9t58505H Brassica oleracea HOM05D004342 ORTHO05D011040 1.7e-100 369.8 264 71.2
BcaB05g23453 Brassica carinata HOM05D004342 ORTHO05D011040 2.8e-100 369.0 264 68.9
BcaB08g35403 Brassica carinata HOM05D004342 ORTHO05D011040 5.3e-99 364.8 266 71.1
BcaB06g27477 Brassica carinata HOM05D004342 ORTHO05D011040 1.2e-98 363.6 253 70.0
C03p70160 Brassica napus HOM05D004342 ORTHO05D011040 2.9e-97 359.0 232 75.4
C02p48390 Brassica napus HOM05D004342 ORTHO05D011040 1.5e-96 356.7 266 68.0
BolC2t10870H Brassica oleracea HOM05D004342 ORTHO05D011040 1.5e-96 356.7 266 68.0
BraA01t02418Z Brassica rapa HOM05D004342 ORTHO05D011040 2.5e-96 355.9 264 69.3
C05p37450 Brassica napus HOM05D004342 ORTHO05D032754 5.5e-96 354.8 243 71.2
BolC3t19271H Brassica oleracea HOM05D004342 ORTHO05D032754 8.0e-95 350.9 241 69.3
BraA04t16111Z Brassica rapa HOM05D004342 ORTHO05D011040 4.0e-94 348.6 268 66.8
BolC6t36906H Brassica oleracea HOM05D004342 ORTHO05D011040 2.0e-93 346.3 268 64.9
BcaB08g35544 Brassica carinata HOM05D004342 ORTHO05D011040 1.1e-91 340.5 264 64.8
BcaC08g47011 Brassica carinata HOM05D004342 ORTHO05D011040 1.8e-91 339.7 256 65.2
BcaB02g10664 Brassica carinata HOM05D004342 ORTHO05D011040 2.0e-90 336.3 260 65.0
BolC7t40696H Brassica oleracea HOM05D004342 ORTHO05D042740 2.0e-90 336.3 247 66.0
BcaB03g16622 Brassica carinata HOM05D004342 ORTHO05D011040 1.7e-89 333.2 264 64.0
C07p03020 Brassica napus HOM05D004342 ORTHO05D042740 3.8e-89 332.0 247 65.2
BolC5t33355H Brassica oleracea HOM05D004342 ORTHO05D016748 1.5e-88 330.1 224 71.4
BolC8t47840H Brassica oleracea HOM05D004342 ORTHO05D016748 1.9e-88 329.7 239 68.2
BcaB02g06560 Brassica carinata HOM05D004342 ORTHO05D011040 7.2e-88 327.8 270 61.5
C07p02600 Brassica napus HOM05D004342 ORTHO05D040391 3.6e-87 325.5 257 62.3
BolC7t40658H Brassica oleracea HOM05D004342 ORTHO05D040391 8.0e-87 324.3 257 61.9
C06p17080 Brassica napus HOM05D004342 ORTHO05D016748 2.3e-86 322.8 217 70.5
C05p46270 Brassica napus HOM05D004342 ORTHO05D016748 5.2e-86 321.6 223 70.4
BcaB07g33971 Brassica carinata HOM05D004342 ORTHO05D011040 1.7e-84 316.6 254 63.8
BcaB04g18145 Brassica carinata HOM05D004342 ORTHO05D011040 2.0e-82 309.7 251 63.3
BcaC03g16189 Brassica carinata HOM05D004342 ORTHO05D011040 8.6e-81 304.3 265 60.4
BolC3t21133H Brassica oleracea HOM05D004342 ORTHO05D016748 6.1e-79 298.1 202 70.8
BolC2t09673H Brassica oleracea HOM05D004342 ORTHO05D042860 4.4e-77 292.0 273 58.2
BcaB05g23199 Brassica carinata HOM05D004342 ORTHO05D011040 3.7e-68 262.3 197 68.0
C03p64680 Brassica napus HOM05D004342 ORTHO05D040895 8.3e-68 261.2 210 61.0
A02p29080 Brassica napus HOM05D004342 ORTHO05D042860 1.9e-67 260.0 262 53.8
BcaB02g11238 Brassica carinata HOM05D004342 ORTHO05D011040 4.1e-67 258.8 144 83.3
C05p32840 Brassica napus HOM05D004342 ORTHO05D041540 3.5e-66 255.8 260 51.9
BolC5t32015H Brassica oleracea HOM05D004342 ORTHO05D041540 3.5e-66 255.8 260 51.9
C04p30590 Brassica napus HOM05D004342 ORTHO05D097110 6.0e-66 255.0 235 57.9
BolC5t32487H Brassica oleracea HOM05D004342 ORTHO05D016748 1.3e-65 253.8 187 69.5
A10p05900 Brassica napus HOM05D004342 ORTHO05D013036 3.0e-65 252.7 168 69.6
A05p21050 Brassica napus HOM05D004342 ORTHO05D013036 5.0e-65 251.9 171 68.4
A06p23950 Brassica napus HOM05D004342 ORTHO05D013036 6.6e-65 251.5 171 68.4
A06p24190 Brassica napus HOM05D004342 ORTHO05D013036 8.6e-65 251.1 168 69.6
BraA04t16568Z Brassica rapa HOM05D004342 ORTHO05D013036 3.3e-64 249.2 169 69.8
A05p24900 Brassica napus HOM05D004342 ORTHO05D013036 5.6e-64 248.4 168 69.0
A02p33870 Brassica napus HOM05D004342 ORTHO05D013036 2.1e-63 246.5 168 68.5
BcaC01g01958 Brassica carinata HOM05D004342 ORTHO05D090434 4.0e-62 242.3 139 79.1
A06p14130 Brassica napus HOM05D004342 ORTHO05D013036 1.5e-61 240.4 168 66.7
BolC2t09619H Brassica oleracea HOM05D004342 ORTHO05D033291 1.3e-60 237.3 250 51.6
A01p25070 Brassica napus HOM05D004342 ORTHO05D011040 1.7e-60 236.9 267 53.9
BcaB06g27861 Brassica carinata HOM05D004342 ORTHO05D011040 6.4e-60 235.0 194 63.9
BcaC08g44285 Brassica carinata HOM05D004342 ORTHO05D016748 6.4e-60 235.0 170 70.0
BraA09t39012Z Brassica rapa HOM05D004342 ORTHO05D041860 8.3e-60 234.6 195 62.6
BolC3t18726H Brassica oleracea HOM05D004342 ORTHO05D040895 1.2e-58 230.7 210 55.2
BolC2t09984H Brassica oleracea HOM05D004342 ORTHO05D107287 1.6e-58 230.3 268 50.0
A09p34820 Brassica napus HOM05D004342 ORTHO05D041860 2.7e-58 229.6 195 61.5
C02p36040 Brassica napus HOM05D004342 ORTHO05D033291 3.0e-57 226.1 248 49.6
BolC8t49973H Brassica oleracea HOM05D004342 ORTHO05D042841 8.6e-57 224.6 208 58.2
BcaB02g07288 Brassica carinata HOM05D004342 ORTHO05D016748 5.6e-56 221.9 150 74.7
C03p68080 Brassica napus HOM05D004342 ORTHO05D042288 2.1e-55 219.9 190 58.4
C06p19750 Brassica napus HOM05D003441 ORTHO05D004516 2.1e-55 219.9 197 60.9
BolC3t19031H Brassica oleracea HOM05D004342 ORTHO05D042288 2.1e-55 219.9 190 58.4
BcaC01g01112 Brassica carinata HOM05D004342 ORTHO05D016748 8.1e-55 218.0 147 72.1
C02p36010 Brassica napus HOM05D004342 ORTHO05D033291 1.1e-54 217.6 236 50.4
A04p03900 Brassica napus HOM05D004342 ORTHO05D018601 6.8e-54 214.9 128 81.2
C08p05970 Brassica napus HOM05D004342 ORTHO05D098872 2.0e-53 213.4 184 59.2
BraA10t42852Z Brassica rapa HOM05D004342 ORTHO05D013036 5.8e-53 211.8 152 65.8
BcaB01g02523 Brassica carinata HOM05D004342 ORTHO05D016748 1.1e-51 207.6 150 68.7
BcaB06g27355 Brassica carinata HOM05D004342 ORTHO05D011040 1.1e-51 207.6 264 44.7
C08p23450 Brassica napus HOM05D004342 ORTHO05D042841 1.1e-51 207.6 255 47.5
BraA06t25485Z Brassica rapa HOM05D004342 ORTHO05D013036 1.2e-50 204.1 149 64.4
BraA10t43034Z Brassica rapa HOM05D004342 ORTHO05D013036 6.0e-50 201.8 152 63.8
BraA02t08405Z Brassica rapa HOM05D004342 ORTHO05D013036 1.3e-49 200.7 149 63.8
BraA01t02499Z Brassica rapa HOM05D004342 ORTHO05D013036 3.0e-49 199.5 149 63.1
BcaB07g33403 Brassica carinata HOM05D004342 ORTHO05D093493 1.1e-48 197.6 147 70.1
BolC8t47411H Brassica oleracea HOM05D004342 ORTHO05D106550 1.5e-48 197.2 236 47.5
BraA06t24546Z Brassica rapa HOM05D004342 ORTHO05D013036 1.5e-48 197.2 149 62.4
BcaB04g18376 Brassica carinata HOM05D004342 ORTHO05D018601 7.3e-48 194.9 119 75.6
C03p88250 Brassica napus HOM05D004342 ORTHO05D018601 2.4e-46 189.9 134 68.7
A03p66330 Brassica napus HOM05D000062 ORTHO05D000043 8.9e-46 188.0 145 64.8
BraSC35t45984Z Brassica rapa HOM05D004342 ORTHO05D014936 7.6e-45 184.9 150 64.0
BcaB01g01175 Brassica carinata HOM05D004342 ORTHO05D018601 1.3e-44 184.1 131 67.2
A10p08140 Brassica napus HOM05D004342 ORTHO05D014936 6.4e-44 181.8 150 64.0
C03p67290 Brassica napus HOM05D004342 ORTHO05D033138 4.2e-43 179.1 189 50.8
BolSC21t60296H Brassica oleracea HOM05D004342 ORTHO05D033138 4.2e-43 179.1 189 50.8
C05p42390 Brassica napus HOM05D004342 ORTHO05D041824 4.6e-42 175.6 140 61.4
BolC5t32968H Brassica oleracea HOM05D004342 ORTHO05D041824 4.6e-42 175.6 140 61.4
A03p64730 Brassica napus HOM05D004342 ORTHO05D013036 1.0e-41 174.5 119 68.1
C02p39690 Brassica napus HOM05D004342 ORTHO05D014936 3.6e-39 166.0 121 70.2
A07p06290 Brassica napus HOM05D004342 ORTHO05D099060 4.8e-39 165.6 118 67.8
BcaB04g17938 Brassica carinata HOM05D004342 ORTHO05D011040 4.0e-38 162.5 102 70.6
C01p35180 Brassica napus HOM05D004342 ORTHO05D028050 6.9e-38 161.8 169 50.9
BolC1t03477H Brassica oleracea HOM05D004342 ORTHO05D028050 6.9e-38 161.8 169 50.9
A01p27340 Brassica napus HOM05D004342 ORTHO05D028050 3.4e-37 159.5 169 49.7
BolC7t41910H Brassica oleracea HOM05D004342 ORTHO05D014936 3.4e-37 159.5 121 68.6
BraA01t02874Z Brassica rapa HOM05D004342 ORTHO05D028050 3.4e-37 159.5 169 49.7
C02p40210 Brassica napus HOM05D004342 ORTHO05D018674 7.6e-37 158.3 113 67.3
C07p14140 Brassica napus HOM05D004342 ORTHO05D014936 7.6e-37 158.3 121 68.6
C02p26240 Brassica napus HOM05D004342 ORTHO05D040487 4.9e-36 155.6 247 39.3
A07p06040 Brassica napus HOM05D004342 ORTHO05D101341 8.4e-36 154.8 148 55.4
BolC2t08690H Brassica oleracea HOM05D004342 ORTHO05D040487 5.4e-35 152.1 247 39.7
C07p09210 Brassica napus HOM05D004342 ORTHO05D014936 1.1e-32 144.4 118 61.9
BolC7t41332H Brassica oleracea HOM05D004342 ORTHO05D014936 1.1e-32 144.4 118 61.9
C02p39700 Brassica napus HOM05D004342 ORTHO05D099964 8.1e-31 138.3 123 58.5
BraSC35t45983Z Brassica rapa HOM05D004342 ORTHO05D018674 8.1e-31 138.3 86 73.3
A06p19230 Brassica napus HOM05D004342 ORTHO05D018601 3.1e-30 136.3 93 71.0
C02p40200 Brassica napus HOM05D004342 ORTHO05D014936 6.9e-30 135.2 103 60.2
BraA03t15693Z Brassica rapa HOM05D004342 ORTHO05D027051 1.2e-29 134.4 83 73.5
A06p35820 Brassica napus HOM05D004342 ORTHO05D013036 2.6e-29 133.3 93 69.9
BcaC07g39329 Brassica carinata HOM05D004342 ORTHO05D018601 1.7e-28 130.6 87 72.4
BcaC06g36550 Brassica carinata HOM05D004342 ORTHO05D018601 1.1e-27 127.9 94 64.9
BolC2t10046H Brassica oleracea HOM05D004342 ORTHO05D018674 5.5e-27 125.6 106 60.4
C01p33380 Brassica napus HOM05D004342 ORTHO05D101940 1.2e-26 124.4 90 68.9
BolC6t36414H Brassica oleracea HOM05D004342 ORTHO05D042454 2.1e-26 123.6 244 34.0
BraA05t21009Z Brassica rapa HOM05D004342 ORTHO05D013036 4.6e-26 122.5 97 61.9
BcaB08g35573 Brassica carinata HOM05D004342 ORTHO05D018674 3.0e-25 119.8 73 69.9
C07p09200 Brassica napus HOM05D004342 ORTHO05D096449 3.0e-25 119.8 82 70.7
BraA07t27945Z Brassica rapa HOM05D004342 ORTHO05D014936 3.3e-24 116.3 100 59.0
BraA06t25909Z Brassica rapa HOM05D004342 ORTHO05D013036 5.6e-24 115.5 94 60.6
BcaB08g34712 Brassica carinata HOM05D004342 ORTHO05D011040 2.8e-23 113.2 264 31.8
A10p08150 Brassica napus HOM05D004342 ORTHO05D018674 2.8e-23 113.2 67 73.1
A03p66340 Brassica napus HOM05D004342 ORTHO05D018674 1.8e-22 110.5 71 69.0
BraA03t15692Z Brassica rapa HOM05D004342 ORTHO05D018674 1.8e-22 110.5 71 69.0
A01p28260 Brassica napus HOM05D004342 ORTHO05D014936 2.4e-22 110.2 101 57.4
BolC7t41081H Brassica oleracea HOM05D004342 ORTHO05D042200 9.0e-22 108.2 127 48.8
C07p06590 Brassica napus HOM05D004342 ORTHO05D042200 3.4e-21 106.3 127 48.8
C06p12600 Brassica napus HOM05D004342 ORTHO05D042454 2.2e-20 103.6 244 31.1
BcaB07g33226 Brassica carinata HOM05D004342 ORTHO05D014936 5.5e-19 99.0 93 55.9
BcaB02g10428 Brassica carinata HOM05D004342 ORTHO05D018674 2.1e-18 97.1 50 86.0
BcaB06g27423 Brassica carinata HOM05D004342 ORTHO05D027051 3.0e-17 93.2 63 74.6
BraA06t26508Z Brassica rapa HOM05D004342 ORTHO05D013036 1.3e-15 87.8 74 60.8
BraA06t25007Z Brassica rapa HOM05D004342 ORTHO05D018601 6.3e-15 85.5 94 48.9
BraA07t27946Z Brassica rapa HOM05D004342 ORTHO05D108557 6.3e-15 85.5 50 72.0
BolC6t39191H Brassica oleracea HOM05D004342 ORTHO05D041978 1.4e-14 84.3 99 47.5
BcaC03g16937 Brassica carinata HOM05D004342 ORTHO05D027051 1.8e-14 84.0 63 69.8
BcaC06g35994 Brassica carinata HOM05D004342 ORTHO05D027051 5.3e-14 82.4 60 70.0
BraA06t25627Z Brassica rapa HOM05D004342 ORTHO05D107595 3.8e-12 76.3 73 52.1
BcaB07g33404 Brassica carinata HOM05D004342 ORTHO05D095904 2.7e-10 70.1 61 54.1
AT1G52950 Arabidopsis thaliana HOM05D000353 ORTHO05D000174 5.1e-09 65.9 240 22.9
BraA07t28391Z Brassica rapa HOM05D004342 ORTHO05D014936 1.1e-08 64.7 81 46.9
BraA06t25628Z Brassica rapa HOM05D004342 ORTHO05D033138 3.3e-08 63.2 100 40.0
A08p24970 Brassica napus HOM05D007568 ORTHO05D009779 3.7e-07 59.7 203 23.6
C06p42390 Brassica napus HOM05D004342 ORTHO05D041978 8.2e-07 58.5 73 45.2
BcaC01g01043 Brassica carinata HOM05D007568 ORTHO05D009779 1.4e-06 57.8 171 25.7
BolC5t33456H Brassica oleracea HOM05D004342 ORTHO05D042428 1.4e-06 57.8 103 35.0
BolC3t21022H Brassica oleracea HOM05D004342 ORTHO05D041047 3.1e-06 56.6 50 56.0


User provided reference genes

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