Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g23720 Brassica carinata HOM05D008384 ORTHO05D009842 1.3e-75 286.2 134 100.0
C03p24860 Brassica napus HOM05D008384 ORTHO05D009842 2.9e-43 178.7 97 84.5
BcaB07g31665 Brassica carinata HOM05D008384 ORTHO05D009842 3.3e-26 122.1 97 57.7
BolC2t10222H Brassica oleracea HOM05D008384 ORTHO05D009842 7.3e-26 120.9 97 55.7
C07p35890 Brassica napus HOM05D008384 ORTHO05D016044 2.1e-25 119.4 97 54.6
BolC7t41062H Brassica oleracea HOM05D008384 ORTHO05D009842 3.6e-25 118.6 97 55.7
BolC2t07876H Brassica oleracea HOM05D008384 ORTHO05D009842 1.1e-24 117.1 97 54.6
C01p40360 Brassica napus HOM05D008384 ORTHO05D009842 1.4e-24 116.7 97 53.6
BcaB05g24894 Brassica carinata HOM05D008384 ORTHO05D009842 3.1e-24 115.5 97 50.5
BcaB03g14887 Brassica carinata HOM05D008384 ORTHO05D009842 2.2e-22 109.4 97 49.5
BcaC08g45148 Brassica carinata HOM05D008384 ORTHO05D009842 3.2e-21 105.5 97 50.5
BcaB01g01529 Brassica carinata HOM05D008384 ORTHO05D009842 3.5e-20 102.1 78 59.0
A07p06840 Brassica napus HOM05D008384 ORTHO05D009842 4.6e-20 101.7 97 55.7
BcaB06g27189 Brassica carinata HOM05D066470 ORTHO05D009842 5.1e-19 98.2 97 46.4
BcaB07g33659 Brassica carinata HOM05D008384 ORTHO05D009842 1.1e-18 97.1 97 45.4
C09p31540 Brassica napus HOM05D008384 ORTHO05D042359 5.6e-18 94.7 77 55.8
C06p00830 Brassica napus HOM05D008384 ORTHO05D009842 1.8e-16 89.7 97 48.5
BcaC01g03468 Brassica carinata HOM05D008384 ORTHO05D009842 3.1e-16 89.0 97 46.4
BcaB07g33986 Brassica carinata HOM05D008384 ORTHO05D009842 4.0e-16 88.6 97 43.3
BolC9t56010H Brassica oleracea HOM05D008384 ORTHO05D042359 1.5e-15 86.7 66 57.6
C03p31500 Brassica napus HOM05D015892 ORTHO05D009842 4.4e-15 85.1 97 44.3
C04p42370 Brassica napus HOM05D015892 ORTHO05D009842 5.8e-15 84.7 97 43.3
BraA04t16529Z Brassica rapa HOM05D015892 ORTHO05D009842 2.2e-14 82.8 100 42.0
BolC2t11345H Brassica oleracea HOM05D008384 ORTHO05D009842 1.1e-13 80.5 65 53.8
C07p60290 Brassica napus HOM05D015892 ORTHO05D009842 5.4e-13 78.2 102 41.2
BcaB07g33633 Brassica carinata HOM05D008384 ORTHO05D009842 3.5e-12 75.5 64 53.1
BcaC01g04977 Brassica carinata HOM05D015892 ORTHO05D009842 1.3e-11 73.6 86 44.2
BcaB08g34566 Brassica carinata HOM05D005627 ORTHO05D009842 8.6e-11 70.9 110 30.9
BcaC05g27035 Brassica carinata HOM05D006289 ORTHO05D032057 4.3e-10 68.6 112 33.9
C05p28920 Brassica napus HOM05D006289 ORTHO05D032057 4.3e-10 68.6 112 33.9
BolC5t31614H Brassica oleracea HOM05D006289 ORTHO05D032057 4.3e-10 68.6 112 33.9
BcaB01g00831 Brassica carinata HOM05D005627 ORTHO05D009842 5.6e-10 68.2 97 34.0
C03p32490 Brassica napus HOM05D008384 ORTHO05D009842 2.1e-09 66.2 57 52.6
C09p22240 Brassica napus HOM05D008384 ORTHO05D016044 4.7e-09 65.1 51 58.8
BcaC04g19885 Brassica carinata HOM05D005627 ORTHO05D017564 6.2e-09 64.7 117 27.4
BcaB07g33832 Brassica carinata HOM05D008384 ORTHO05D009842 8.1e-09 64.3 97 36.1
BcaB05g23054 Brassica carinata HOM05D005627 ORTHO05D011792 1.4e-08 63.5 97 32.0
BcaC02g11662 Brassica carinata HOM05D005627 ORTHO05D011792 1.4e-08 63.5 97 33.0
C04p12610 Brassica napus HOM05D005627 ORTHO05D011792 1.4e-08 63.5 97 33.0
BolC2t11294H Brassica oleracea HOM05D006289 ORTHO05D002086 2.4e-08 62.8 103 32.0
BcaB01g01914 Brassica carinata HOM05D005627 ORTHO05D009842 4.0e-08 62.0 117 27.4
BcaB08g34625 Brassica carinata HOM05D008384 ORTHO05D009842 5.2e-08 61.6 51 54.9
BraA05t20010Z Brassica rapa HOM05D006289 ORTHO05D028190 6.8e-08 61.2 117 30.8
BcaB01g00118 Brassica carinata HOM05D005627 ORTHO05D009842 8.9e-08 60.8 117 23.9
BcaB04g19296 Brassica carinata HOM05D006289 ORTHO05D017564 8.9e-08 60.8 97 30.9
BcaC01g04902 Brassica carinata HOM05D008384 ORTHO05D009842 8.9e-08 60.8 45 57.8
C03p74240 Brassica napus HOM05D006289 ORTHO05D028190 1.5e-07 60.1 117 29.9
BolC3t19682H Brassica oleracea HOM05D006289 ORTHO05D028190 1.5e-07 60.1 117 29.9
BcaC05g27914 Brassica carinata HOM05D005627 ORTHO05D011792 2.6e-07 59.3 97 29.9
BolC3t18952H Brassica oleracea HOM05D006289 ORTHO05D017568 2.6e-07 59.3 117 29.1
A09p28360 Brassica napus HOM05D006289 ORTHO05D027118 3.4e-07 58.9 117 27.4
BcaB01g01127 Brassica carinata HOM05D006289 ORTHO05D017564 4.4e-07 58.5 97 26.8
BraA02t08907Z Brassica rapa HOM05D001038 ORTHO05D000395 4.4e-07 58.5 117 26.5
C02p52110 Brassica napus HOM05D005627 ORTHO05D040212 5.8e-07 58.2 117 28.2
BolC2t11295H Brassica oleracea HOM05D005627 ORTHO05D040212 5.8e-07 58.2 117 28.2
BcaB04g19628 Brassica carinata HOM05D005627 ORTHO05D017564 7.6e-07 57.8 117 26.5
BolC9t59378H Brassica oleracea HOM05D006289 ORTHO05D017568 7.6e-07 57.8 118 28.8
BraA07t28776Z Brassica rapa HOM05D005627 ORTHO05D017568 7.6e-07 57.8 117 27.4
BcaC05g27915 Brassica carinata HOM05D005627 ORTHO05D011792 9.9e-07 57.4 97 28.9
BraA07t28814Z Brassica rapa HOM05D006289 ORTHO05D009842 9.9e-07 57.4 95 30.5
BcaC04g18632 Brassica carinata HOM05D036101 ORTHO05D032848 1.7e-06 56.6 39 66.7
A03p68400 Brassica napus HOM05D005627 ORTHO05D017564 1.7e-06 56.6 103 27.2
BolC1t03992H Brassica oleracea HOM05D008384 ORTHO05D009842 1.7e-06 56.6 40 57.5
C01p10680 Brassica napus HOM05D005627 ORTHO05D011792 2.2e-06 56.2 68 33.8
C09p37890 Brassica napus HOM05D013280 ORTHO05D011792 2.2e-06 56.2 88 29.5
A02p12540 Brassica napus HOM05D006289 ORTHO05D009842 3.8e-06 55.5 95 32.6
BraA10t43450Z Brassica rapa HOM05D006289 ORTHO05D009842 3.8e-06 55.5 95 32.6
BcaC04g19240 Brassica carinata HOM05D006289 ORTHO05D017568 6.4e-06 54.7 117 26.5
BraA10t42593Z Brassica rapa HOM05D006289 ORTHO05D009842 6.4e-06 54.7 95 31.6
SpUn0001_0070 Schrenkiella parvula HOM05D008384 ORTHO05D009842 6.4e-06 54.7 97 29.9


User provided reference genes

Program Settings