Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g23718 Brassica carinata HOM05D008153 ORTHO05D004666 8.1e-126 453.8 229 100.0
BcaB03g16401 Brassica carinata HOM05D001285 ORTHO05D000199 5.5e-50 201.8 115 87.8
BcaB02g06419 Brassica carinata HOM05D009373 ORTHO05D091170 5.4e-45 185.3 101 91.1
BcaB05g23487 Brassica carinata HOM05D009373 ORTHO05D095609 1.6e-36 157.1 112 73.2
BcaB04g17840 Brassica carinata HOM05D009373 ORTHO05D093373 3.5e-36 156.0 92 87.0
BraA05t21259Z Brassica rapa HOM05D008153 ORTHO05D020125 1.3e-27 127.5 151 41.7
BcaB08g35133 Brassica carinata HOM05D008153 ORTHO05D095710 6.6e-27 125.2 102 60.8
BcaB06g27707 Brassica carinata HOM05D009373 ORTHO05D091285 8.6e-27 124.8 69 91.3
BolC5t30821H Brassica oleracea HOM05D008153 ORTHO05D017528 2.1e-25 120.2 107 53.3
BcaB05g23465 Brassica carinata HOM05D009373 ORTHO05D092769 4.7e-25 119.0 126 58.7
BolC6t36532H Brassica oleracea HOM05D008153 ORTHO05D032208 1.4e-24 117.5 123 47.2
BolC9t55294H Brassica oleracea HOM05D008153 ORTHO05D027153 1.4e-24 117.5 125 44.0
BraA08t32874Z Brassica rapa HOM05D004930 ORTHO05D006531 8.9e-24 114.8 152 39.5
BolC7t41432H Brassica oleracea HOM05D008153 ORTHO05D106440 1.9e-21 107.1 128 44.5
BcaC09g48532 Brassica carinata HOM05D008153 ORTHO05D093342 3.2e-21 106.3 128 49.2
BcaC06g35973 Brassica carinata HOM05D008153 ORTHO05D096259 9.2e-21 104.8 134 47.8
BcaC09g48542 Brassica carinata HOM05D008153 ORTHO05D090607 7.3e-18 95.1 122 47.5
BcaC02g10424 Brassica carinata HOM05D008153 ORTHO05D027153 2.8e-17 93.2 87 50.6
BolC5t32560H Brassica oleracea HOM05D008153 ORTHO05D017528 2.4e-16 90.1 164 34.8
BcaC08g43694 Brassica carinata HOM05D008153 ORTHO05D027153 3.1e-16 89.7 79 55.7
BcaC05g27640 Brassica carinata HOM05D008153 ORTHO05D093383 1.5e-15 87.4 137 42.3
BcaB05g23464 Brassica carinata HOM05D009373 ORTHO05D091492 4.4e-15 85.9 85 56.5
BcaB03g16251 Brassica carinata HOM05D009373 ORTHO05D096381 3.8e-14 82.8 85 57.6
BcaC05g27796 Brassica carinata HOM05D008153 ORTHO05D027153 3.8e-14 82.8 78 51.3
BraA02t07518Z Brassica rapa HOM05D008153 ORTHO05D020125 1.1e-13 81.3 91 46.2
Thhalv10029169m.g Eutrema salsugineum HOM05D009543 ORTHO05D004666 4.2e-13 79.3 47 85.1
Sp6g04195 Schrenkiella parvula HOM05D009543 ORTHO05D004666 1.2e-12 77.8 47 83.0
AT4G04745 Arabidopsis thaliana HOM05D009543 ORTHO05D004666 1.6e-12 77.4 47 83.0
C03p36430 Brassica napus HOM05D009543 ORTHO05D004666 2.1e-12 77.0 57 70.2
BolC3t15955H Brassica oleracea HOM05D009543 ORTHO05D004666 2.1e-12 77.0 57 70.2
A03p30180 Brassica napus HOM05D009543 ORTHO05D004666 3.5e-12 76.3 57 68.4
BraA03t12202Z Brassica rapa HOM05D009543 ORTHO05D004666 3.5e-12 76.3 57 68.4
BcaB01g02575 Brassica carinata HOM05D009543 ORTHO05D004666 6.0e-12 75.5 71 60.6
CARHR252810 Cardamine hirsuta HOM05D009543 ORTHO05D004666 6.0e-12 75.5 47 80.9
BcaB03g16542 Brassica carinata HOM05D009373 ORTHO05D094621 7.8e-12 75.1 78 57.7
AL6G48230 Arabidopsis lyrata HOM05D009543 ORTHO05D004666 1.0e-11 74.7 47 80.9
BcaB01g01831 Brassica carinata HOM05D009543 ORTHO05D004666 3.0e-11 73.2 47 78.7
BcaC02g10506 Brassica carinata HOM05D008153 ORTHO05D021840 3.9e-11 72.8 81 49.4
BcaC04g21321 Brassica carinata HOM05D009543 ORTHO05D004666 6.6e-11 72.0 47 78.7
A09p26130 Brassica napus HOM05D009543 ORTHO05D004666 6.6e-11 72.0 48 81.2
C09p33170 Brassica napus HOM05D009543 ORTHO05D004666 6.6e-11 72.0 47 78.7
BolC9t56151H Brassica oleracea HOM05D009543 ORTHO05D004666 6.6e-11 72.0 47 78.7
BraA09t38180Z Brassica rapa HOM05D009543 ORTHO05D004666 6.6e-11 72.0 48 81.2
BcaB02g06418 Brassica carinata HOM05D009373 ORTHO05D091208 2.4e-08 63.5 32 90.6
BcaB07g33920 Brassica carinata HOM05D009373 ORTHO05D095945 2.4e-08 63.5 33 90.9
BcaB05g23444 Brassica carinata HOM05D009373 ORTHO05D092334 5.3e-08 62.4 32 90.6
Carub.0006s3264 Capsella rubella HOM05D009543 ORTHO05D004666 2.6e-07 60.1 51 68.6
BcaB06g26740 Brassica carinata HOM05D009373 ORTHO05D092310 9.9e-07 58.2 32 84.4
BcaB08g35150 Brassica carinata HOM05D009373 ORTHO05D094369 3.8e-06 56.2 29 89.7
BcaB01g01833 Brassica carinata HOM05D009543 ORTHO05D004666 4.9e-06 55.8 41 70.7


User provided reference genes

Program Settings