Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g23704 Brassica carinata HOM05D009117 ORTHO05D012204 5.7e-184 647.5 341 100.0
BcaB05g23366 Brassica carinata HOM05D009117 ORTHO05D012204 3.6e-106 389.0 229 86.5
A09p37280 Brassica napus HOM05D009117 ORTHO05D012204 1.5e-54 217.6 113 92.0
A03p68140 Brassica napus HOM05D009117 ORTHO05D012204 3.2e-54 216.5 113 92.9
C02p27840 Brassica napus HOM05D009117 ORTHO05D012204 3.2e-54 216.5 113 92.9
C02p28440 Brassica napus HOM05D009117 ORTHO05D012204 7.2e-54 215.3 113 92.9
BolC2t08887H Brassica oleracea HOM05D009117 ORTHO05D012204 7.2e-54 215.3 113 92.9
BraA01t02653Z Brassica rapa HOM05D009117 ORTHO05D012204 7.2e-54 215.3 113 92.0
C07p19280 Brassica napus HOM05D009117 ORTHO05D012204 9.4e-54 214.9 113 92.0
BolC1t02526H Brassica oleracea HOM05D009117 ORTHO05D012204 8.8e-52 208.4 113 91.2
A02p20020 Brassica napus HOM05D009117 ORTHO05D012204 4.4e-51 206.1 106 93.4
A09p17260 Brassica napus HOM05D009117 ORTHO05D012204 4.4e-51 206.1 106 93.4
C01p25760 Brassica napus HOM05D009117 ORTHO05D012204 1.3e-50 204.5 113 89.4
BolC3t21359H Brassica oleracea HOM05D009117 ORTHO05D012204 3.7e-50 203.0 113 87.6
BolC7t41869H Brassica oleracea HOM05D009117 ORTHO05D012204 1.6e-48 197.6 113 87.6
A07p43380 Brassica napus HOM05D009117 ORTHO05D024074 1.7e-47 194.1 262 43.9
BcaC08g43055 Brassica carinata HOM05D009117 ORTHO05D024074 7.5e-35 152.1 218 42.2
BcaNung03499 Brassica carinata HOM05D009590 ORTHO05D020087 1.1e-25 121.7 344 30.8
C01p30030 Brassica napus HOM05D009590 ORTHO05D042627 4.1e-25 119.8 356 27.5
BolC1t02943H Brassica oleracea HOM05D009590 ORTHO05D042627 4.1e-25 119.8 356 27.5
A10p33160 Brassica napus HOM05D009117 ORTHO05D012204 9.2e-25 118.6 60 95.0
C03p10840 Brassica napus HOM05D009590 ORTHO05D100504 2.7e-24 117.1 328 31.7
BcaB07g32585 Brassica carinata HOM05D009590 ORTHO05D014118 3.1e-20 103.6 110 45.5
BcaB08g35443 Brassica carinata HOM05D009117 ORTHO05D024074 5.2e-20 102.8 289 34.6
C04p26320 Brassica napus HOM05D009590 ORTHO05D042950 2.4e-17 94.0 314 25.5
BolC4t24175H Brassica oleracea HOM05D009590 ORTHO05D042950 2.4e-17 94.0 314 25.5
BolC1t03303H Brassica oleracea HOM05D009590 ORTHO05D014118 2.7e-16 90.5 337 25.2
BcaC06g36732 Brassica carinata HOM05D009590 ORTHO05D014118 3.5e-16 90.1 130 36.9
C04p12300 Brassica napus HOM05D009590 ORTHO05D014118 3.5e-16 90.1 349 24.9
BcaC02g10657 Brassica carinata HOM05D009590 ORTHO05D014118 6.0e-16 89.4 135 34.8
BraA01t02898Z Brassica rapa HOM05D009590 ORTHO05D014118 1.5e-14 84.7 111 35.1
BolC2t07403H Brassica oleracea HOM05D009590 ORTHO05D014118 1.6e-13 81.3 132 37.9
BolC2t08829H Brassica oleracea HOM05D009117 ORTHO05D012204 2.8e-13 80.5 38 94.7
BcaC04g20540 Brassica carinata HOM05D009590 ORTHO05D014118 1.5e-11 74.7 89 37.1
Sp6g09970 Schrenkiella parvula HOM05D009590 ORTHO05D014118 4.9e-10 69.7 77 44.2
BolC4t22877H Brassica oleracea HOM05D009590 ORTHO05D014118 8.4e-10 68.9 111 30.6
A10p10590 Brassica napus HOM05D009117 ORTHO05D024074 7.1e-09 65.9 147 36.1
A01p27590 Brassica napus HOM05D009590 ORTHO05D014118 3.0e-07 60.5 74 36.5
C09p34070 Brassica napus HOM05D009590 ORTHO05D020087 5.1e-07 59.7 76 44.7
BolC9t56243H Brassica oleracea HOM05D009590 ORTHO05D020087 5.1e-07 59.7 76 44.7
Sp5g15830 Schrenkiella parvula HOM05D001959 ORTHO05D001955 5.6e-06 56.2 105 33.3


User provided reference genes

Program Settings