Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g23675 Brassica carinata HOM05D006121 ORTHO05D016754 2.7e-118 428.7 221 100.0
BcaC06g36507 Brassica carinata HOM05D006121 ORTHO05D009559 1.2e-30 137.5 185 45.9
BcaC03g16371 Brassica carinata HOM05D006121 ORTHO05D009559 8.0e-30 134.8 145 52.4
BcaC05g27433 Brassica carinata HOM05D006121 ORTHO05D009559 6.8e-29 131.7 233 41.6
BcaC06g35988 Brassica carinata HOM05D006121 ORTHO05D009559 8.9e-29 131.3 185 44.3
BcaC04g23066 Brassica carinata HOM05D006121 ORTHO05D009559 1.5e-28 130.6 184 44.6
BcaC03g17371 Brassica carinata HOM05D006121 ORTHO05D009559 1.3e-27 127.5 202 44.6
BcaC04g23210 Brassica carinata HOM05D006121 ORTHO05D009559 3.7e-27 125.9 164 48.2
BcaC03g16227 Brassica carinata HOM05D006121 ORTHO05D009559 5.4e-26 122.1 161 48.4
BcaC01g02238 Brassica carinata HOM05D006121 ORTHO05D009559 7.0e-26 121.7 195 41.5
BcaB05g23669 Brassica carinata HOM05D015128 ORTHO05D016754 1.1e-23 114.4 56 98.2
BcaC01g05819 Brassica carinata HOM05D006121 ORTHO05D009559 4.7e-22 109.0 131 50.4
BcaC09g49541 Brassica carinata HOM05D006121 ORTHO05D009559 2.9e-19 99.8 131 50.4
BraA09t38607Z Brassica rapa HOM05D006121 ORTHO05D009559 2.9e-19 99.8 194 38.1
BcaC07g37903 Brassica carinata HOM05D006121 ORTHO05D009559 6.4e-19 98.6 119 51.3
BcaC07g37897 Brassica carinata HOM05D006121 ORTHO05D009559 8.3e-19 98.2 137 46.7
BolC3t18346H Brassica oleracea HOM05D015128 ORTHO05D016754 3.5e-17 92.8 62 72.6
BcaC04g20762 Brassica carinata HOM05D006121 ORTHO05D009559 1.5e-12 77.4 138 39.9
A03p15180 Brassica napus HOM05D001465 ORTHO05D001434 2.0e-12 77.0 60 70.0
BraA03t10812Z Brassica rapa HOM05D001465 ORTHO05D001434 2.0e-12 77.0 60 70.0
C06p06650 Brassica napus HOM05D015128 ORTHO05D016754 2.9e-11 73.2 50 74.0
BolC6t37110H Brassica oleracea HOM05D015128 ORTHO05D016754 2.9e-11 73.2 43 76.7
BolC8t50122H Brassica oleracea HOM05D015128 ORTHO05D016754 6.4e-11 72.0 44 72.7
BcaNung06631 Brassica carinata HOM05D001465 ORTHO05D001434 1.4e-10 70.9 57 70.2
BcaNung07346 Brassica carinata HOM05D001465 ORTHO05D001434 1.4e-10 70.9 57 70.2
BcaC09g51377 Brassica carinata HOM05D006121 ORTHO05D009559 1.9e-10 70.5 94 50.0
BcaC01g06247 Brassica carinata HOM05D001465 ORTHO05D001434 2.4e-10 70.1 33 93.9
C03p17710 Brassica napus HOM05D001465 ORTHO05D001434 7.1e-10 68.6 53 67.9
BolC3t14181H Brassica oleracea HOM05D001465 ORTHO05D001434 7.1e-10 68.6 53 67.9
BcaC08g44457 Brassica carinata HOM05D006121 ORTHO05D009559 3.9e-08 62.8 69 47.8
BcaC04g20824 Brassica carinata HOM05D006121 ORTHO05D013509 8.6e-08 61.6 147 29.9
C08p25020 Brassica napus HOM05D000500 ORTHO05D000367 8.6e-08 61.6 36 72.2
BcaC01g06835 Brassica carinata HOM05D006121 ORTHO05D009559 9.6e-07 58.2 134 28.4
BcaNung03347 Brassica carinata HOM05D006121 ORTHO05D009559 9.6e-07 58.2 47 63.8
Thhalv10013106m.g Eutrema salsugineum HOM05D001465 ORTHO05D001434 9.6e-07 58.2 28 89.3
BcaC06g34988 Brassica carinata HOM05D006121 ORTHO05D009559 1.2e-06 57.8 66 53.0
BcaC01g02131 Brassica carinata HOM05D006121 ORTHO05D013509 2.8e-06 56.6 156 26.9
BcaC02g11960 Brassica carinata HOM05D006121 ORTHO05D009559 2.8e-06 56.6 134 32.8
BcaC03g16573 Brassica carinata HOM05D006121 ORTHO05D009559 2.8e-06 56.6 89 44.9
BcaC08g44151 Brassica carinata HOM05D006121 ORTHO05D009559 2.8e-06 56.6 58 56.9
BcaB05g22033 Brassica carinata HOM05D001465 ORTHO05D001434 3.6e-06 56.2 26 84.6
BcaC09g49792 Brassica carinata HOM05D006121 ORTHO05D009559 3.6e-06 56.2 65 49.2
Carub.0008s1353 Capsella rubella HOM05D001465 ORTHO05D001434 3.6e-06 56.2 84 47.6
BcaC05g26479 Brassica carinata HOM05D008386 ORTHO05D010572 4.7e-06 55.8 80 40.0
BcaC04g20036 Brassica carinata HOM05D006121 ORTHO05D009559 6.2e-06 55.5 65 49.2


User provided reference genes

Program Settings