Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g23651 Brassica carinata HOM05D003908 ORTHO05D004488 8.9e-84 313.5 156 100.0
BcaB01g02026 Brassica carinata HOM05D003908 ORTHO05D004488 6.7e-31 137.9 156 55.8
BcaB01g02477 Brassica carinata HOM05D003908 ORTHO05D004488 6.7e-31 137.9 156 55.8
BcaC04g24002 Brassica carinata HOM05D003908 ORTHO05D004488 6.7e-31 137.9 156 55.8
A03p30970 Brassica napus HOM05D003908 ORTHO05D004488 6.7e-31 137.9 156 55.8
A09p02050 Brassica napus HOM05D003908 ORTHO05D004488 6.7e-31 137.9 156 55.8
C09p02140 Brassica napus HOM05D003908 ORTHO05D004488 6.7e-31 137.9 156 55.8
BolC9t53144H Brassica oleracea HOM05D003908 ORTHO05D004488 6.7e-31 137.9 156 55.8
Sp6g02530 Schrenkiella parvula HOM05D003908 ORTHO05D004488 8.8e-31 137.5 156 55.1
BcaC01g06745 Brassica carinata HOM05D003908 ORTHO05D004488 1.5e-30 136.7 156 55.1
C03p37740 Brassica napus HOM05D003908 ORTHO05D004488 1.5e-30 136.7 156 55.1
BolC3t16064H Brassica oleracea HOM05D003908 ORTHO05D004488 1.5e-30 136.7 156 55.1
CARHR250910 Cardamine hirsuta HOM05D003908 ORTHO05D004488 1.5e-30 136.7 156 54.5
BcaC03g16154 Brassica carinata HOM05D003908 ORTHO05D004488 2.0e-30 136.3 136 60.3
Thhalv10029066m.g Eutrema salsugineum HOM05D003908 ORTHO05D004488 2.0e-30 136.3 156 54.5
C02p39240 Brassica napus HOM05D003908 ORTHO05D004488 2.5e-30 136.0 116 67.2
BolC2t09935H Brassica oleracea HOM05D003908 ORTHO05D004488 2.5e-30 136.0 116 67.2
BraA03t12274Z Brassica rapa HOM05D003908 ORTHO05D004488 2.5e-30 136.0 116 67.2
BraA09t35854Z Brassica rapa HOM05D003908 ORTHO05D004488 2.5e-30 136.0 116 67.2
AL6G50430 Arabidopsis lyrata HOM05D003908 ORTHO05D004488 3.3e-30 135.6 156 53.8
AT4G02620 Arabidopsis thaliana HOM05D003908 ORTHO05D004488 3.3e-30 135.6 156 53.8
Carub.0006s3452 Capsella rubella HOM05D003908 ORTHO05D004488 3.3e-30 135.6 156 53.8
Aa31LG5G2250 Aethionema arabicum HOM05D003908 ORTHO05D004488 8.2e-29 131.0 153 52.9
THA.LOC104801254 Tarenaya hassleriana HOM05D003908 ORTHO05D004488 5.3e-28 128.3 153 51.6
THA.LOC104825983 Tarenaya hassleriana HOM05D003908 ORTHO05D004488 5.3e-28 128.3 153 51.6
Zm00001eb111070 Zea mays HOM05D003908 ORTHO05D004488 9.1e-28 127.5 157 50.3
Zm00001eb330190 Zea mays HOM05D003908 ORTHO05D004488 9.1e-28 127.5 157 50.3
arahy.Tifrunner.gnm1.ann1.95Q6AF Arachis hypogaea HOM05D003908 ORTHO05D004488 1.2e-27 127.1 153 51.0
arahy.Tifrunner.gnm1.ann1.Y10HXA Arachis hypogaea HOM05D003908 ORTHO05D004488 1.2e-27 127.1 153 51.0
Actinidia19977 Actinidia chinensis HOM05D003908 ORTHO05D004488 1.5e-27 126.7 153 50.3
Actinidia27523 Actinidia chinensis HOM05D003908 ORTHO05D004488 1.5e-27 126.7 153 50.3
PGSC0003DMG400009421 Solanum tuberosum HOM05D003908 ORTHO05D004488 1.5e-27 126.7 153 50.3
Thecc.01G268300 Theobroma cacao HOM05D003908 ORTHO05D004488 1.5e-27 126.7 153 50.3
unitig_22.g5278 Utricularia gibba HOM05D003908 ORTHO05D004488 1.5e-27 126.7 153 50.3
Ca_18213_v3 Cicer arietinum L. HOM05D003908 ORTHO05D004488 2.6e-27 125.9 153 50.3
Lj4g0023890 Lotus japonicus HOM05D003908 ORTHO05D004488 2.6e-27 125.9 113 61.1
TPR.G34752 Trifolium pratense HOM05D003908 ORTHO05D004488 2.6e-27 125.9 153 50.3
Lalb_Chr12g0209211 Lupinus albus HOM05D003908 ORTHO05D004488 3.4e-27 125.6 153 49.0
Nitab4.5_0000360g0160 Nicotiana tabacum HOM05D003908 ORTHO05D004488 3.4e-27 125.6 156 49.4
Nitab4.5_0000443g0180 Nicotiana tabacum HOM05D003908 ORTHO05D004488 3.4e-27 125.6 156 48.7
Nitab4.5_0002776g0060 Nicotiana tabacum HOM05D003908 ORTHO05D004488 3.4e-27 125.6 156 49.4
ECA240G0363 Erigeron canadensis HOM05D003908 ORTHO05D004488 4.5e-27 125.2 153 49.7
Gohir.A08G188000 Gossypium hirsutum HOM05D003908 ORTHO05D004488 4.5e-27 125.2 153 49.7
Gohir.D08G206400 Gossypium hirsutum HOM05D003908 ORTHO05D004488 4.5e-27 125.2 153 49.7
Gorai.004G218600 Gossypium raimondii HOM05D003908 ORTHO05D004488 4.5e-27 125.2 153 49.7
HanXRQChr03g0088561 Helianthus annuus HOM05D003908 ORTHO05D004488 4.5e-27 125.2 113 61.1
Hma1.2p1_0760F.1_g214230 Hydrangea macrophylla HOM05D003908 ORTHO05D004488 4.5e-27 125.2 153 49.0
Solyc02g068450.3 Solanum lycopersicum HOM05D003908 ORTHO05D004488 4.5e-27 125.2 153 49.7
Sopen02g017590 Solanum pennellii HOM05D003908 ORTHO05D004488 4.5e-27 125.2 153 49.7
Thecc.05G283700 Theobroma cacao HOM05D003908 ORTHO05D004488 4.5e-27 125.2 153 50.3
arahy.Tifrunner.gnm1.ann1.LT9XWZ Arachis hypogaea HOM05D003908 ORTHO05D004488 5.9e-27 124.8 113 61.1
arahy.Tifrunner.gnm1.ann1.XQ21SD Arachis hypogaea HOM05D003908 ORTHO05D004488 5.9e-27 124.8 113 61.1
Glyma.05G135300 Glycine max HOM05D003908 ORTHO05D004488 5.9e-27 124.8 153 49.7
Glyma.08G090500 Glycine max HOM05D003908 ORTHO05D004488 5.9e-27 124.8 153 49.7
Phvul.002G186900 Phaseolus vulgaris HOM05D003908 ORTHO05D004488 5.9e-27 124.8 153 49.7
CSS0045088 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 7.7e-27 124.4 150 50.0
Duzib106G0327 Durio zibethinus HOM05D003908 ORTHO05D004488 7.7e-27 124.4 153 50.3
Duzib138G1305 Durio zibethinus HOM05D003908 ORTHO05D004488 7.7e-27 124.4 153 49.0
Rhsim01G0201300 Rhododendron simsii HOM05D003908 ORTHO05D004488 7.7e-27 124.4 153 49.0
Migut.D00367 Erythranthe guttata HOM05D003908 ORTHO05D004488 1.0e-26 124.0 113 60.2
Peaxi162Scf00199g00925 Petunia axillaris HOM05D003908 ORTHO05D004488 1.0e-26 124.0 156 48.7
VMungo0251G3698 Vigna mungo HOM05D003908 ORTHO05D004488 1.0e-26 124.0 153 49.0
GSVIVG01031574001 Vitis vinifera HOM05D003908 ORTHO05D004488 1.0e-26 124.0 113 61.1
CAN.G1299.5 Capsicum annuum HOM05D003908 ORTHO05D004488 1.3e-26 123.6 153 48.4
Dinv34562 Davidia involucrata HOM05D003908 ORTHO05D004488 1.3e-26 123.6 113 60.2
Os02g0824700 Oryza sativa ssp. japonica HOM05D003908 ORTHO05D004488 1.3e-26 123.6 113 60.2
Os04g0137500 Oryza sativa ssp. japonica HOM05D003908 ORTHO05D004488 1.3e-26 123.6 113 60.2
CSS0036720 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 1.7e-26 123.2 153 49.0
CSS0040700 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 1.7e-26 123.2 153 49.0
Psat7g086640 Pisum sativum HOM05D003908 ORTHO05D004488 1.7e-26 123.2 153 49.7
Sabra05G0166800 Salix brachista HOM05D003908 ORTHO05D004488 1.7e-26 123.2 153 49.7
SGA_v2.0_scaffold580G53041 Striga asiatica HOM05D006471 ORTHO05D004488 1.7e-26 123.2 153 48.4
Hma1.2p1_0172F.1_g076150 Hydrangea macrophylla HOM05D003908 ORTHO05D004488 2.2e-26 122.9 153 49.0
Actinidia24932 Actinidia chinensis HOM05D005044 ORTHO05D006799 2.9e-26 122.5 150 49.3
Ah.02g111400 Amaranthus hybridus HOM05D003908 ORTHO05D004488 2.9e-26 122.5 113 58.4
Ah.11g050040 Amaranthus hybridus HOM05D005044 ORTHO05D006799 2.9e-26 122.5 113 58.4
MD04G1224300 Malus domestica HOM05D003908 ORTHO05D004488 2.9e-26 122.5 113 59.3
Eucgr.B02621 Eucalyptus grandis HOM05D003908 ORTHO05D004488 3.8e-26 122.1 113 60.2
MSTRG.21514 Avicennia marina HOM05D003908 ORTHO05D004488 5.0e-26 121.7 113 57.5
Peaxi162Scf00198g01017 Petunia axillaris HOM05D003908 ORTHO05D004488 5.0e-26 121.7 113 58.4
SalBow3G3620 Salvia bowleyana HOM05D003908 ORTHO05D004488 5.0e-26 121.7 113 57.5
CSS0040042 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 6.5e-26 121.3 153 47.7
CiPaw.08G123800 Carya illinoinensis HOM05D003908 ORTHO05D004488 6.5e-26 121.3 113 59.3
FAN05G0658 Fragaria x ananassa HOM05D003908 ORTHO05D004488 6.5e-26 121.3 113 59.3
FAN09G2689 Fragaria x ananassa HOM05D003908 ORTHO05D004488 6.5e-26 121.3 113 59.3
Gohir.A08G215400 Gossypium hirsutum HOM05D003908 ORTHO05D004488 6.5e-26 121.3 153 49.0
Gorai.004G246600 Gossypium raimondii HOM05D003908 ORTHO05D004488 6.5e-26 121.3 153 49.0
MD12G1241000 Malus domestica HOM05D003908 ORTHO05D004488 6.5e-26 121.3 113 59.3
Rhsim01G0270200 Rhododendron simsii HOM05D003908 ORTHO05D004488 6.5e-26 121.3 153 48.4
HPP92_018775 Vanilla planifolia HOM05D003908 ORTHO05D004488 6.5e-26 121.3 113 58.4
CSS0027656 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 8.5e-26 120.9 113 58.4
Eucgr.C04384 Eucalyptus grandis HOM05D003908 ORTHO05D004488 8.5e-26 120.9 113 59.3
MBI07_g21062_MAGBIO Magnolia biondii HOM05D003908 ORTHO05D004488 8.5e-26 120.9 153 47.7
Nitab4.5_0002305g0050 Nicotiana tabacum HOM05D003908 ORTHO05D004488 8.5e-26 120.9 112 58.9
Potri.005G217600 Populus trichocarpa HOM05D003908 ORTHO05D004488 8.5e-26 120.9 153 49.0
TAR633G1149 Trochodendron aralioides HOM05D003908 ORTHO05D004488 8.5e-26 120.9 113 59.3
vmacro14877 Vaccinium macrocarpon HOM05D003908 ORTHO05D004488 8.5e-26 120.9 113 58.4
Aqoxy5G00367 Aquilegia oxysepala HOM05D003908 ORTHO05D004488 1.1e-25 120.6 153 47.7
Cc09_g07930 Coffea canephora HOM05D003908 ORTHO05D004488 1.1e-25 120.6 163 45.4
Duzib133G0635 Durio zibethinus HOM05D003908 ORTHO05D004488 1.1e-25 120.6 113 59.3
PSO210G0243 Papaver somniferum HOM05D003908 ORTHO05D004488 1.1e-25 120.6 153 49.0
PSO832G4196 Papaver somniferum HOM05D003908 ORTHO05D004488 1.1e-25 120.6 153 49.0
RcHm_v2.0_Chr3g0451151 Rosa chinensis HOM05D003908 ORTHO05D004488 1.1e-25 120.6 113 59.3
Atru.chr2.813 Acer truncatum HOM05D003908 ORTHO05D004488 1.4e-25 120.2 153 47.1
Aqoxy6G02470 Aquilegia oxysepala HOM05D003908 ORTHO05D004488 1.4e-25 120.2 153 47.1
Gohir.A13G052900 Gossypium hirsutum HOM05D003908 ORTHO05D004488 1.4e-25 120.2 153 47.7
Prupe.5G006500 Prunus persica HOM05D003908 ORTHO05D004488 1.4e-25 120.2 113 58.4
Hund02874 Selenicereus undatus HOM05D003908 ORTHO05D004488 1.4e-25 120.2 113 56.6
Atru.chr4.2009 Acer truncatum HOM05D003908 ORTHO05D004488 1.9e-25 119.8 153 47.1
Cfa006421 Carpinus fangiana HOM05D003908 ORTHO05D004488 1.9e-25 119.8 113 58.4
Haze_04363 Corylus avellana HOM05D003908 ORTHO05D004488 1.9e-25 119.8 113 58.4
FvH4_6g02960 Fragaria vesca HOM05D003908 ORTHO05D004488 1.9e-25 119.8 113 58.4
Lsat_1_v5_gn_6_91060 Lactuca sativa HOM05D003908 ORTHO05D004488 1.9e-25 119.8 113 56.6
SGA_v2.0_scaffold138G35289 Striga asiatica HOM05D003696 ORTHO05D005158 1.9e-25 119.8 113 56.6
COL.COLO4_06708 Corchorus olitorius HOM05D003908 ORTHO05D004488 2.5e-25 119.4 113 58.4
Lj1g0011223 Lotus japonicus HOM05D003908 ORTHO05D004488 2.5e-25 119.4 153 49.0
Sed0024016 Sechium edule HOM05D003908 ORTHO05D004488 2.5e-25 119.4 113 57.5
CANSAT21G0496 Cannabis sativa HOM05D003908 ORTHO05D004488 3.2e-25 119.0 113 57.5
COL.COLO4_15346 Corchorus olitorius HOM05D003908 ORTHO05D004488 3.2e-25 119.0 113 58.4
Dinv04731 Davidia involucrata HOM05D003908 ORTHO05D004488 3.2e-25 119.0 113 56.6
MBI10_g16831_MAGBIO Magnolia biondii HOM05D003908 ORTHO05D004488 3.2e-25 119.0 153 47.7
Manes.07G050600 Manihot esculenta HOM05D003908 ORTHO05D004488 3.2e-25 119.0 157 47.8
HPP92_001854 Vanilla planifolia HOM05D003908 ORTHO05D004488 3.2e-25 119.0 113 57.5
ClCG03G017370 Citrullus lanatus HOM05D003908 ORTHO05D004488 4.2e-25 118.6 113 57.5
MELO3C015218.2 Cucumis melo HOM05D003908 ORTHO05D004488 4.2e-25 118.6 113 57.5
CsaV3_1G042520 Cucumis sativus L. HOM05D003908 ORTHO05D004488 4.2e-25 118.6 113 57.5
QL03p025800 Quercus lobata HOM05D003908 ORTHO05D004488 4.2e-25 118.6 113 56.6
TWI12G1100 Tripterygium wilfordii HOM05D003908 ORTHO05D004488 4.2e-25 118.6 113 56.6
Prupe.6G005500 Prunus persica HOM05D003908 ORTHO05D004488 5.5e-25 118.2 113 57.5
Sed0027410 Sechium edule HOM05D003908 ORTHO05D004488 5.5e-25 118.2 113 56.6
Sc17g0001030 Simmondsia chinensis HOM05D003908 ORTHO05D004488 5.5e-25 118.2 153 46.4
EL10Ac5g10467 Beta vulgaris HOM05D003908 ORTHO05D004488 7.2e-25 117.9 113 56.6
FAN14G5491 Fragaria x ananassa HOM05D003908 ORTHO05D004488 7.2e-25 117.9 113 57.5
Oeu018177.1 Olea europaea HOM05D003908 ORTHO05D004488 7.2e-25 117.9 113 56.6
TAR362G1230 Trochodendron aralioides HOM05D003908 ORTHO05D004488 7.2e-25 117.9 113 55.8
Ciclev10002833m.g Citrus clementina HOM05D003908 ORTHO05D004488 9.4e-25 117.5 113 57.5
Gorai.013G079800 Gossypium raimondii HOM05D003908 ORTHO05D004488 9.4e-25 117.5 153 47.1
ATR0787G044 Amborella trichopoda HOM05D003908 ORTHO05D004488 1.2e-24 117.1 113 56.6
Nn3g19495 Nelumbo nucifera HOM05D003908 ORTHO05D004488 1.2e-24 117.1 153 47.7
PGR031G1854 Punica granatum HOM05D003908 ORTHO05D004488 1.2e-24 117.1 113 58.4
SGA_v2.0_scaffold1G00551 Striga asiatica HOM05D006471 ORTHO05D008157 1.2e-24 117.1 113 55.8
Gohir.D08G232100 Gossypium hirsutum HOM05D003908 ORTHO05D004488 1.6e-24 116.7 153 48.4
Gohir.D13G069500 Gossypium hirsutum HOM05D003908 ORTHO05D004488 2.1e-24 116.3 153 46.4
PSO135G0069 Papaver somniferum HOM05D003908 ORTHO05D004488 2.1e-24 116.3 113 57.5
Cpa.g.sc117.89 Carica papaya HOM05D003908 ORTHO05D004488 2.7e-24 115.9 113 56.6
CDE09G0316 Ceratophyllum demersum HOM05D003908 ORTHO05D004488 2.7e-24 115.9 153 47.1
PSO384G1262 Papaver somniferum HOM05D003908 ORTHO05D004488 4.7e-24 115.2 113 56.6
CiPaw.04G181400 Carya illinoinensis HOM05D003908 ORTHO05D004488 6.1e-24 114.8 113 54.9
TWI18G0751 Tripterygium wilfordii HOM05D003908 ORTHO05D004488 1.0e-23 114.0 113 54.0
Ciclev10022651m.g Citrus clementina HOM05D003908 ORTHO05D004488 1.5e-22 110.2 113 54.9
Mapoly0079s0004 Marchantia polymorpha HOM05D003908 ORTHO05D004488 7.4e-22 107.8 115 48.7
CSS0024256 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 1.3e-21 107.1 108 52.8
CSS0029390 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 1.3e-21 107.1 108 52.8
CSS0046821 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 1.3e-21 107.1 108 52.8
Pp3c6_17470 Physcomitrium patens HOM05D003908 ORTHO05D004488 2.2e-21 106.3 110 49.1
Pp3c25_8080 Physcomitrium patens HOM05D003908 ORTHO05D004488 2.8e-21 105.9 110 49.1
CSS0043230 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 7.0e-20 101.3 107 51.4
CBR_g38932 Chara braunii HOM05D003908 ORTHO05D004488 1.2e-19 100.5 113 48.7
CDE11G1041 Ceratophyllum demersum HOM05D005443 ORTHO05D004488 1.5e-19 100.1 103 53.4
Actinidia04661 Actinidia chinensis HOM05D003908 ORTHO05D004488 2.0e-19 99.8 100 57.0
Actinidia21151 Actinidia chinensis HOM05D003908 ORTHO05D004488 2.0e-19 99.8 100 57.0
CSS0038153 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 3.5e-19 99.0 104 51.0
Hund09564 Selenicereus undatus HOM05D003908 ORTHO05D004488 4.5e-19 98.6 49 93.9
CSS0044738 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 5.9e-19 98.2 142 43.7
SEGI_40634 Sequoiadendron giganteum HOM05D003908 ORTHO05D004488 5.9e-19 98.2 111 49.5
Nitab4.5_0008708g0010 Nicotiana tabacum HOM05D003908 ORTHO05D004488 1.3e-18 97.1 49 91.8
SMO367G0680 Selaginella moellendorffii HOM05D003908 ORTHO05D004488 3.8e-18 95.5 113 43.4
Lalb_Chr20g0122811 Lupinus albus HOM05D003908 ORTHO05D004488 8.5e-18 94.4 49 89.8
DCAR_012514 Daucus carota HOM05D003908 ORTHO05D004488 1.4e-17 93.6 47 91.5
DCAR_018445 Daucus carota HOM05D003908 ORTHO05D004488 1.4e-17 93.6 47 91.5
COL.COLO4_30210 Corchorus olitorius HOM05D003908 ORTHO05D004488 1.9e-17 93.2 57 84.2
Nitab4.5_0000138g0160 Nicotiana tabacum HOM05D003908 ORTHO05D004488 4.2e-17 92.0 99 52.5
Haze_21722 Corylus avellana HOM05D003908 ORTHO05D004488 2.1e-16 89.7 113 48.7
PRCOL_00000544 Prasinoderma coloniale HOM05D003908 ORTHO05D004488 1.5e-14 83.6 108 40.7
MCO03G460 Micromonas commoda HOM05D003908 ORTHO05D004488 3.3e-14 82.4 113 39.8
Cre10.g446550 Chlamydomonas reinhardtii HOM05D003908 ORTHO05D004488 1.1e-12 77.4 106 40.6
Haze_26154 Corylus avellana HOM05D003908 ORTHO05D004488 3.8e-10 68.9 110 34.5
CSS0012932 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 8.5e-10 67.8 35 82.9
Peaxi162Scf01294g00317 Petunia axillaris HOM05D003908 ORTHO05D004488 1.5e-09 67.0 33 90.9


User provided reference genes

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