Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g23629 Brassica carinata HOM05D000971 ORTHO05D000901 4.4e-100 367.9 174 100.0
BcaNung00391 Brassica carinata HOM05D000971 ORTHO05D000901 2.0e-12 76.6 43 81.4
AL5G31700 Arabidopsis lyrata HOM05D000971 ORTHO05D000901 3.5e-12 75.9 41 85.4
AT3G51280 Arabidopsis thaliana HOM05D000971 ORTHO05D000901 3.5e-12 75.9 41 85.4
BcaB01g00535 Brassica carinata HOM05D000971 ORTHO05D000901 3.5e-12 75.9 41 85.4
A03p48240 Brassica napus HOM05D000971 ORTHO05D000901 3.5e-12 75.9 41 85.4
C08p26560 Brassica napus HOM05D000971 ORTHO05D000901 3.5e-12 75.9 41 85.4
Thhalv10010403m.g Eutrema salsugineum HOM05D000971 ORTHO05D000901 3.5e-12 75.9 41 85.4
Sp5g10940 Schrenkiella parvula HOM05D000971 ORTHO05D000901 3.5e-12 75.9 41 85.4
CARHR160860 Cardamine hirsuta HOM05D000971 ORTHO05D000901 4.6e-12 75.5 41 82.9
A01p23540 Brassica napus HOM05D000971 ORTHO05D000901 6.0e-12 75.1 41 82.9
BraA01t02260Z Brassica rapa HOM05D000971 ORTHO05D000901 6.0e-12 75.1 41 82.9
C07p46270 Brassica napus HOM05D000971 ORTHO05D000901 7.8e-12 74.7 41 82.9
MBI09_g35942_MAGBIO Magnolia biondii HOM05D000971 ORTHO05D000901 1.3e-11 73.9 68 52.9
BolC8t50269H Brassica oleracea HOM05D000971 ORTHO05D000901 1.7e-11 73.6 41 82.9
BcaB05g25186 Brassica carinata HOM05D000971 ORTHO05D000901 2.3e-11 73.2 40 85.0
BcaC04g21048 Brassica carinata HOM05D000971 ORTHO05D000901 3.0e-11 72.8 48 70.8
BolC9t56461H Brassica oleracea HOM05D000971 ORTHO05D000901 3.0e-11 72.8 48 70.8
Oeu014560.1 Olea europaea HOM05D000971 ORTHO05D000901 3.9e-11 72.4 41 78.0
HanXRQChr15g0483911 Helianthus annuus HOM05D000971 ORTHO05D000901 5.0e-11 72.0 41 78.0
Lsat_1_v5_gn_3_72560 Lactuca sativa HOM05D000971 ORTHO05D000901 5.0e-11 72.0 41 78.0
BcaC01g02283 Brassica carinata HOM05D000971 ORTHO05D000901 6.6e-11 71.6 41 80.5
ECA246G4778 Erigeron canadensis HOM05D000971 ORTHO05D000901 6.6e-11 71.6 41 75.6
Sabra05G0091900 Salix brachista HOM05D000971 ORTHO05D000901 6.6e-11 71.6 41 80.5
THA.LOC104821336 Tarenaya hassleriana HOM05D000971 ORTHO05D000901 6.6e-11 71.6 41 80.5
Oeu036569.1 Olea europaea HOM05D000971 ORTHO05D000901 8.6e-11 71.2 40 80.0
Sc16g0002010 Simmondsia chinensis HOM05D000971 ORTHO05D000901 1.5e-10 70.5 41 78.0
ClCG01G020430 Citrullus lanatus HOM05D000971 ORTHO05D000901 1.9e-10 70.1 41 78.0
Duzib264G0774 Durio zibethinus HOM05D000971 ORTHO05D000901 1.9e-10 70.1 41 78.0
PSO541G4624 Papaver somniferum HOM05D000971 ORTHO05D000901 1.9e-10 70.1 41 73.2
PSO675G6524 Papaver somniferum HOM05D000971 ORTHO05D000901 1.9e-10 70.1 41 73.2
BolC8t48353H Brassica oleracea HOM05D000971 ORTHO05D000901 2.5e-10 69.7 41 78.0
MELO3C007922.2 Cucumis melo HOM05D000971 ORTHO05D000901 2.5e-10 69.7 41 75.6
CsaV3_6G047310 Cucumis sativus L. HOM05D000971 ORTHO05D000901 2.5e-10 69.7 41 75.6
Eucgr.J02462 Eucalyptus grandis HOM05D000971 ORTHO05D000901 2.5e-10 69.7 41 78.0
Cfa006996 Carpinus fangiana HOM05D000971 ORTHO05D000901 3.3e-10 69.3 41 75.6
Haze_03736 Corylus avellana HOM05D000971 ORTHO05D000901 3.3e-10 69.3 41 75.6
Gohir.A11G173700 Gossypium hirsutum HOM05D000971 ORTHO05D000901 3.3e-10 69.3 41 78.0
HanXRQChr16g0531531 Helianthus annuus HOM05D000971 ORTHO05D000901 4.3e-10 68.9 41 75.6
Sed0013645 Sechium edule HOM05D000971 ORTHO05D000901 5.6e-10 68.6 41 75.6
Sed0015718 Sechium edule HOM05D000971 ORTHO05D000901 5.6e-10 68.6 41 75.6
TAR628G1426 Trochodendron aralioides HOM05D000971 ORTHO05D000901 5.6e-10 68.6 41 75.6
FAN26G3068 Fragaria x ananassa HOM05D000971 ORTHO05D000901 7.3e-10 68.2 41 75.6
Nn5g30761 Nelumbo nucifera HOM05D000971 ORTHO05D000901 1.2e-09 67.4 41 75.6
Glyma.02G046200 Glycine max HOM05D000971 ORTHO05D000901 1.6e-09 67.0 41 75.6
Glyma.16G124700 Glycine max HOM05D000971 ORTHO05D000901 1.6e-09 67.0 41 75.6
Phvul.003G264900 Phaseolus vulgaris HOM05D000971 ORTHO05D000901 1.6e-09 67.0 41 75.6
VMungo0251G1809 Vigna mungo HOM05D000971 ORTHO05D000901 1.6e-09 67.0 41 75.6
Lsat_1_v5_gn_8_108641 Lactuca sativa HOM05D000971 ORTHO05D000901 4.7e-09 65.5 52 59.6
ATR0712G141 Amborella trichopoda HOM05D000971 ORTHO05D000901 1.4e-08 63.9 45 66.7
BcaC02g11459 Brassica carinata HOM05D000971 ORTHO05D000901 1.4e-08 63.9 35 82.9
C03p67050 Brassica napus HOM05D000971 ORTHO05D015474 3.1e-08 62.8 53 58.5
BolC3t18979H Brassica oleracea HOM05D000971 ORTHO05D015474 3.1e-08 62.8 53 58.5
C04p15260 Brassica napus HOM05D000971 ORTHO05D015474 4.0e-08 62.4 53 58.5
BolC4t23097H Brassica oleracea HOM05D000971 ORTHO05D000901 4.0e-08 62.4 53 58.5
SEGI_01466 Sequoiadendron giganteum HOM05D000971 ORTHO05D000901 5.2e-08 62.0 41 68.3
Lalb_Chr16g0391371 Lupinus albus HOM05D000971 ORTHO05D000901 1.2e-07 60.8 42 69.0
HPP92_025911 Vanilla planifolia HOM05D000971 ORTHO05D000901 2.6e-07 59.7 50 60.0
HPP92_025916 Vanilla planifolia HOM05D000971 ORTHO05D000901 2.6e-07 59.7 50 60.0
Actinidia36754 Actinidia chinensis HOM05D000971 ORTHO05D000901 5.8e-07 58.5 33 84.8
Os09g0538500 Oryza sativa ssp. japonica HOM05D000971 ORTHO05D000901 7.5e-07 58.2 41 63.4
Zm00001eb103750 Zea mays HOM05D000971 ORTHO05D000901 7.5e-07 58.2 41 63.4
C09p36240 Brassica napus HOM05D000971 ORTHO05D000901 9.8e-07 57.8 55 50.9
Zm00001eb332020 Zea mays HOM05D000971 ORTHO05D000901 1.7e-06 57.0 41 61.0
CDE04G2566 Ceratophyllum demersum HOM05D000971 ORTHO05D000901 2.2e-06 56.6 41 63.4
SEGI_13552 Sequoiadendron giganteum HOM05D000971 ORTHO05D000901 6.4e-06 55.1 45 53.3
CDE02G2381 Ceratophyllum demersum HOM05D000971 ORTHO05D000901 8.3e-06 54.7 41 61.0


User provided reference genes

Program Settings