Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g23614 Brassica carinata HOM05D002582 ORTHO05D002781 1.2e-69 266.5 144 100.0
BcaB05g23613 Brassica carinata HOM05D000313 ORTHO05D000065 8.6e-33 144.1 78 100.0
BcaB06g26365 Brassica carinata HOM05D002582 ORTHO05D002781 5.1e-17 91.7 164 42.7
BcaC06g32587 Brassica carinata HOM05D002582 ORTHO05D002781 5.4e-11 71.6 109 48.6
A10p30250 Brassica napus HOM05D002582 ORTHO05D002781 5.4e-11 71.6 116 45.7
C09p70660 Brassica napus HOM05D002582 ORTHO05D002781 7.1e-11 71.2 113 46.0
BolC9t59822H Brassica oleracea HOM05D002582 ORTHO05D002781 7.1e-11 71.2 113 46.0
BraA10t45063Z Brassica rapa HOM05D002582 ORTHO05D002781 9.3e-11 70.9 113 46.0
BolC3t12851H Brassica oleracea HOM05D002582 ORTHO05D002781 2.3e-09 66.2 138 40.6
CARHR206920 Cardamine hirsuta HOM05D002582 ORTHO05D002781 2.3e-09 66.2 115 42.6
AT5G06220 Arabidopsis thaliana HOM05D002582 ORTHO05D002781 5.1e-09 65.1 115 43.5
Carub.0006s0509 Capsella rubella HOM05D002582 ORTHO05D002781 5.1e-09 65.1 115 43.5
BcaB01g05984 Brassica carinata HOM05D002582 ORTHO05D002781 1.5e-08 63.5 138 39.9
C03p03010 Brassica napus HOM05D002582 ORTHO05D002781 1.5e-08 63.5 138 39.9
Sp6g36660 Schrenkiella parvula HOM05D002582 ORTHO05D002781 1.5e-08 63.5 115 41.7
Aa31LG3G4950 Aethionema arabicum HOM05D002582 ORTHO05D002781 2.5e-08 62.8 115 40.0
Thhalv10012627m.g Eutrema salsugineum HOM05D002582 ORTHO05D002781 7.4e-08 61.2 139 38.8
Sp3g09800 Schrenkiella parvula HOM05D002582 ORTHO05D002781 7.4e-08 61.2 115 38.3
BcaB05g23193 Brassica carinata HOM05D000313 ORTHO05D000065 1.3e-07 60.5 42 81.0
AL6G16220 Arabidopsis lyrata HOM05D002582 ORTHO05D002781 1.6e-07 60.1 108 42.6
BcaB01g05735 Brassica carinata HOM05D002582 ORTHO05D002781 2.1e-07 59.7 114 43.9
A03p02620 Brassica napus HOM05D002582 ORTHO05D002781 2.1e-07 59.7 114 43.9
BraA03t09623Z Brassica rapa HOM05D002582 ORTHO05D002781 2.1e-07 59.7 114 43.9
BcaB06g25608 Brassica carinata HOM05D002582 ORTHO05D002781 2.8e-07 59.3 139 34.5
A05p37770 Brassica napus HOM05D002582 ORTHO05D002781 2.8e-07 59.3 139 34.5
C05p56390 Brassica napus HOM05D002582 ORTHO05D002781 2.8e-07 59.3 139 34.5
BolC5t34306H Brassica oleracea HOM05D002582 ORTHO05D002781 2.8e-07 59.3 139 34.5
BraA05t22572Z Brassica rapa HOM05D002582 ORTHO05D002781 2.8e-07 59.3 139 34.5
BcaC05g29355 Brassica carinata HOM05D002582 ORTHO05D002781 6.2e-07 58.2 139 34.5
Carub.0003s1088 Capsella rubella HOM05D002582 ORTHO05D002781 6.2e-07 58.2 138 33.3
AT3G11560 Arabidopsis thaliana HOM05D002582 ORTHO05D002781 1.1e-06 57.4 139 34.5
Thhalv10020029m.g Eutrema salsugineum HOM05D002582 ORTHO05D002781 1.1e-06 57.4 139 34.5
CARHR086110 Cardamine hirsuta HOM05D002582 ORTHO05D002781 1.8e-06 56.6 139 33.1
BcaC06g35487 Brassica carinata HOM05D000313 ORTHO05D000065 2.4e-06 56.2 42 66.7
A09p07380 Brassica napus HOM05D002582 ORTHO05D002781 2.4e-06 56.2 48 64.6
BcaC05g27414 Brassica carinata HOM05D000313 ORTHO05D000065 4.0e-06 55.5 39 71.8
BolC6t36221H Brassica oleracea HOM05D000313 ORTHO05D000065 5.3e-06 55.1 42 66.7
C07p15520 Brassica napus HOM05D000313 ORTHO05D000065 6.9e-06 54.7 42 64.3
BolC3t21647H Brassica oleracea HOM05D000313 ORTHO05D000065 6.9e-06 54.7 42 64.3


User provided reference genes

Program Settings