Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g23613 Brassica carinata HOM05D000313 ORTHO05D000065 1.5e-68 262.7 133 100.0
BcaB05g23614 Brassica carinata HOM05D002582 ORTHO05D002781 3.6e-33 145.2 78 100.0
BcaB04g17117 Brassica carinata HOM05D000313 ORTHO05D000065 3.3e-18 95.5 62 74.2
BcaB06g26365 Brassica carinata HOM05D002582 ORTHO05D002781 4.7e-17 91.7 74 66.2
BcaB04g17856 Brassica carinata HOM05D000313 ORTHO05D000065 8.0e-17 90.9 65 72.3
A03p61810 Brassica napus HOM05D000313 ORTHO05D000065 1.0e-16 90.5 65 64.6
C08p27740 Brassica napus HOM05D000313 ORTHO05D000065 1.0e-16 90.5 65 67.7
BcaC05g27414 Brassica carinata HOM05D000313 ORTHO05D000065 1.4e-16 90.1 62 71.0
BolC4t23669H Brassica oleracea HOM05D000313 ORTHO05D000065 1.4e-16 90.1 65 64.6
BcaC06g31618 Brassica carinata HOM05D000313 ORTHO05D000065 1.8e-16 89.7 69 66.7
BcaC06g36731 Brassica carinata HOM05D000313 ORTHO05D000065 1.8e-16 89.7 65 66.2
BolC7t40506H Brassica oleracea HOM05D000313 ORTHO05D000065 1.8e-16 89.7 65 66.2
A09p23680 Brassica napus HOM05D000313 ORTHO05D000065 2.3e-16 89.4 65 64.6
A09p47000 Brassica napus HOM05D000313 ORTHO05D000065 2.3e-16 89.4 65 64.6
BraA09t40166Z Brassica rapa HOM05D000313 ORTHO05D000065 2.3e-16 89.4 65 64.6
C02p40980 Brassica napus HOM05D000313 ORTHO05D000065 3.0e-16 89.0 65 66.2
C04p21440 Brassica napus HOM05D000313 ORTHO05D000065 4.0e-16 88.6 65 63.1
BolC6t36221H Brassica oleracea HOM05D000313 ORTHO05D000065 6.8e-16 87.8 62 67.7
BcaB07g33840 Brassica carinata HOM05D000313 ORTHO05D000065 8.9e-16 87.4 62 66.1
BcaC06g35487 Brassica carinata HOM05D000313 ORTHO05D000065 8.9e-16 87.4 65 64.6
BolC3t21647H Brassica oleracea HOM05D000313 ORTHO05D000065 8.9e-16 87.4 65 63.1
C09p33280 Brassica napus HOM05D000313 ORTHO05D000065 1.5e-15 86.7 65 66.2
BolC9t56164H Brassica oleracea HOM05D000313 ORTHO05D000065 1.5e-15 86.7 65 66.2
BcaC02g08554 Brassica carinata HOM05D000313 ORTHO05D000065 2.0e-15 86.3 65 61.5
A02p29540 Brassica napus HOM05D000313 ORTHO05D000065 2.0e-15 86.3 77 61.0
C01p35750 Brassica napus HOM05D000313 ORTHO05D000065 2.0e-15 86.3 65 63.1
BolC1t03534H Brassica oleracea HOM05D000313 ORTHO05D000065 2.0e-15 86.3 65 63.1
BolC3t16353H Brassica oleracea HOM05D000313 ORTHO05D000065 2.0e-15 86.3 65 64.6
BraA02t07979Z Brassica rapa HOM05D000313 ORTHO05D003591 2.0e-15 86.3 77 61.0
BcaC09g49275 Brassica carinata HOM05D000313 ORTHO05D000065 2.6e-15 85.9 65 64.6
C01p40640 Brassica napus HOM05D000313 ORTHO05D000065 2.6e-15 85.9 65 64.6
C07p15520 Brassica napus HOM05D000313 ORTHO05D000065 2.6e-15 85.9 65 63.1
C04p18340 Brassica napus HOM05D000313 ORTHO05D000065 4.4e-15 85.1 65 64.6
BcaB02g06763 Brassica carinata HOM05D000313 ORTHO05D000065 5.7e-15 84.7 85 56.5
BcaC06g36665 Brassica carinata HOM05D000313 ORTHO05D000065 7.5e-15 84.3 65 63.1
BolC7t40570H Brassica oleracea HOM05D000313 ORTHO05D000065 7.5e-15 84.3 65 63.1
BcaC04g21544 Brassica carinata HOM05D000313 ORTHO05D000065 9.8e-15 84.0 65 63.1
BcaC05g27737 Brassica carinata HOM05D000313 ORTHO05D000065 9.8e-15 84.0 65 61.5
A03p45920 Brassica napus HOM05D000313 ORTHO05D000065 9.8e-15 84.0 65 61.5
C05p31010 Brassica napus HOM05D000313 ORTHO05D000065 9.8e-15 84.0 65 63.1
C05p37250 Brassica napus HOM05D000313 ORTHO05D000065 9.8e-15 84.0 65 61.5
C09p44110 Brassica napus HOM05D000313 ORTHO05D000065 9.8e-15 84.0 65 61.5
BolC7t42040H Brassica oleracea HOM05D000313 ORTHO05D000065 9.8e-15 84.0 65 61.5
C05p46420 Brassica napus HOM05D000313 ORTHO05D000065 1.3e-14 83.6 65 61.5
BraA01t04033Z Brassica rapa HOM05D000313 ORTHO05D000065 1.3e-14 83.6 65 63.1
A09p20060 Brassica napus HOM05D000313 ORTHO05D000065 1.7e-14 83.2 65 63.1
BcaB07g33821 Brassica carinata HOM05D000313 ORTHO05D000065 2.2e-14 82.8 65 61.5
BcaB02g10989 Brassica carinata HOM05D000313 ORTHO05D000065 2.8e-14 82.4 90 51.1
BcaB04g16903 Brassica carinata HOM05D000313 ORTHO05D000065 2.8e-14 82.4 62 62.9
BcaC02g08920 Brassica carinata HOM05D000313 ORTHO05D000065 2.8e-14 82.4 109 45.0
BolC4t26494H Brassica oleracea HOM05D000313 ORTHO05D000065 2.8e-14 82.4 109 45.0
BcaC02g07753 Brassica carinata HOM05D000313 ORTHO05D000065 3.7e-14 82.0 62 62.9
BcaC03g16075 Brassica carinata HOM05D000022 ORTHO05D013684 3.7e-14 82.0 65 61.5
BcaC08g44549 Brassica carinata HOM05D000313 ORTHO05D000065 3.7e-14 82.0 65 63.1
BolC2t09854H Brassica oleracea HOM05D000313 ORTHO05D000065 3.7e-14 82.0 65 61.5
BcaC02g07918 Brassica carinata HOM05D000313 ORTHO05D000065 4.9e-14 81.6 65 60.0
BraA07t29010Z Brassica rapa HOM05D000313 ORTHO05D000065 4.9e-14 81.6 62 66.1
A05p21270 Brassica napus HOM05D000313 ORTHO05D000065 6.3e-14 81.3 109 44.0
BraA05t21034Z Brassica rapa HOM05D000313 ORTHO05D000065 6.3e-14 81.3 109 44.0
A10p12060 Brassica napus HOM05D000313 ORTHO05D000065 8.3e-14 80.9 109 45.0
BraA09t39507Z Brassica rapa HOM05D000313 ORTHO05D000065 8.3e-14 80.9 109 45.0
BolC5t30506H Brassica oleracea HOM05D000313 ORTHO05D000065 1.1e-13 80.5 65 61.5
A07p12260 Brassica napus HOM05D000313 ORTHO05D000065 1.4e-13 80.1 62 66.1
BcaC02g12357 Brassica carinata HOM05D000313 ORTHO05D000065 3.2e-13 79.0 109 43.1
C05p17990 Brassica napus HOM05D000313 ORTHO05D000065 3.2e-13 79.0 109 42.2
BolC4t22110H Brassica oleracea HOM05D000313 ORTHO05D000065 3.2e-13 79.0 109 43.1
BcaB02g07631 Brassica carinata HOM05D000313 ORTHO05D000065 5.4e-13 78.2 112 42.9
C01p04300 Brassica napus HOM05D000313 ORTHO05D000065 9.2e-13 77.4 65 58.5
BcaB04g18556 Brassica carinata HOM05D000313 ORTHO05D000065 1.2e-12 77.0 59 66.1
BolC9t53456H Brassica oleracea HOM05D000313 ORTHO05D000065 1.6e-12 76.6 57 61.4
BcaC06g30789 Brassica carinata HOM05D000313 ORTHO05D000065 2.0e-12 76.3 65 56.9
C07p23830 Brassica napus HOM05D000313 ORTHO05D000065 2.0e-12 76.3 56 64.3
BcaB05g21583 Brassica carinata HOM05D000313 ORTHO05D000065 3.5e-12 75.5 59 64.4
A03p36970 Brassica napus HOM05D000313 ORTHO05D000065 1.3e-11 73.6 65 52.3
BcaC01g04545 Brassica carinata HOM05D000313 ORTHO05D000065 3.9e-11 72.0 65 50.8
BcaC06g35177 Brassica carinata HOM05D000313 ORTHO05D000065 5.0e-11 71.6 65 50.8
BolC7t42406H Brassica oleracea HOM05D000313 ORTHO05D000065 5.0e-11 71.6 65 50.8
C04p33330 Brassica napus HOM05D000313 ORTHO05D000065 8.6e-11 70.9 68 45.6
BcaB05g23193 Brassica carinata HOM05D000313 ORTHO05D000065 2.5e-10 69.3 46 78.3
A09p22770 Brassica napus HOM05D000313 ORTHO05D000065 2.5e-10 69.3 57 57.9
A02p13460 Brassica napus HOM05D000313 ORTHO05D000065 3.3e-10 68.9 71 50.7
C05p18010 Brassica napus HOM05D000313 ORTHO05D000065 3.3e-10 68.9 65 49.2
BcaC05g28354 Brassica carinata HOM05D000313 ORTHO05D000065 4.3e-10 68.6 75 49.3
C04p06280 Brassica napus HOM05D000313 ORTHO05D000065 4.3e-10 68.6 65 53.8
BcaC07g37360 Brassica carinata HOM05D000313 ORTHO05D000065 5.6e-10 68.2 75 50.7
BolC8t47660H Brassica oleracea HOM05D000313 ORTHO05D000065 5.6e-10 68.2 75 50.7
C03p79730 Brassica napus HOM05D000313 ORTHO05D000065 9.5e-10 67.4 52 61.5
C09p62680 Brassica napus HOM05D000313 ORTHO05D000065 9.5e-10 67.4 65 46.2
BcaC09g48338 Brassica carinata HOM05D000313 ORTHO05D000065 1.2e-09 67.0 65 46.2
A01p07440 Brassica napus HOM05D000313 ORTHO05D000065 1.2e-09 67.0 65 46.2
A08p13660 Brassica napus HOM05D000313 ORTHO05D000065 1.2e-09 67.0 65 46.2
C03p49020 Brassica napus HOM05D000313 ORTHO05D000065 1.2e-09 67.0 65 47.7
BolC3t17179H Brassica oleracea HOM05D000313 ORTHO05D000065 1.2e-09 67.0 65 47.7
BraA09t37737Z Brassica rapa HOM05D000313 ORTHO05D000065 1.2e-09 67.0 64 48.4
BcaC06g34226 Brassica carinata HOM05D000313 ORTHO05D000065 1.6e-09 66.6 62 58.1
BcaC09g48412 Brassica carinata HOM05D000313 ORTHO05D000065 1.6e-09 66.6 91 41.8
BolC1t04960H Brassica oleracea HOM05D000313 ORTHO05D000065 1.6e-09 66.6 91 41.8
BcaNung04477 Brassica carinata HOM05D000313 ORTHO05D000065 2.8e-09 65.9 62 51.6
BolC8t46904H Brassica oleracea HOM05D000313 ORTHO05D000065 2.8e-09 65.9 65 50.8
C01p50060 Brassica napus HOM05D000313 ORTHO05D000065 3.6e-09 65.5 91 41.8
C02p24380 Brassica napus HOM05D000313 ORTHO05D000065 3.6e-09 65.5 62 51.6
BolC1t03899H Brassica oleracea HOM05D000313 ORTHO05D041652 3.6e-09 65.5 61 54.1
BraA08t34530Z Brassica rapa HOM05D000313 ORTHO05D000065 3.6e-09 65.5 65 44.6
C02p24580 Brassica napus HOM05D000313 ORTHO05D000065 4.7e-09 65.1 91 40.7
C07p00630 Brassica napus HOM05D000313 ORTHO05D000065 4.7e-09 65.1 61 55.7
C08p08710 Brassica napus HOM05D000313 ORTHO05D000065 4.7e-09 65.1 65 46.2
BolC2t12325H Brassica oleracea HOM05D000313 ORTHO05D000065 4.7e-09 65.1 65 46.2
C07p00620 Brassica napus HOM05D000313 ORTHO05D000065 8.0e-09 64.3 81 45.7
BcaC07g37400 Brassica carinata HOM05D000313 ORTHO05D000065 1.4e-08 63.5 65 44.6
BolC8t47721H Brassica oleracea HOM05D000313 ORTHO05D000065 1.4e-08 63.5 65 44.6
BcaC03g15390 Brassica carinata HOM05D000313 ORTHO05D000065 1.8e-08 63.2 65 47.7
C05p33640 Brassica napus HOM05D000313 ORTHO05D000065 1.8e-08 63.2 65 52.3
C08p01460 Brassica napus HOM05D000313 ORTHO05D000065 1.8e-08 63.2 88 45.5
BolC4t25625H Brassica oleracea HOM05D000313 ORTHO05D000065 1.8e-08 63.2 65 47.7
BolC5t32095H Brassica oleracea HOM05D000313 ORTHO05D000065 1.8e-08 63.2 65 52.3
BcaC06g36730 Brassica carinata HOM05D000313 ORTHO05D000065 2.3e-08 62.8 61 54.1
BcaC08g44117 Brassica carinata HOM05D000313 ORTHO05D000065 2.3e-08 62.8 39 74.4
A06p31400 Brassica napus HOM05D000313 ORTHO05D000065 2.3e-08 62.8 65 46.2
A09p40830 Brassica napus HOM05D000313 ORTHO05D000065 2.3e-08 62.8 65 46.2
BolC7t40507H Brassica oleracea HOM05D000313 ORTHO05D000065 2.3e-08 62.8 61 54.1
BraA09t37856Z Brassica rapa HOM05D000313 ORTHO05D000065 2.3e-08 62.8 65 46.2
BcaC03g13942 Brassica carinata HOM05D000313 ORTHO05D000065 3.1e-08 62.4 72 47.2
BcaC03g15391 Brassica carinata HOM05D000313 ORTHO05D000065 3.1e-08 62.4 72 47.2
BcaC03g16635 Brassica carinata HOM05D000313 ORTHO05D000065 3.1e-08 62.4 75 45.3
BcaNung02812 Brassica carinata HOM05D000313 ORTHO05D000065 3.1e-08 62.4 73 43.8
C02p44680 Brassica napus HOM05D000313 ORTHO05D000065 3.1e-08 62.4 75 45.3
BolC7t43562H Brassica oleracea HOM05D000313 ORTHO05D000065 3.1e-08 62.4 72 47.2
Thhalv10002234m.g Eutrema salsugineum HOM05D000313 ORTHO05D000065 3.1e-08 62.4 107 36.4
BcaB01g02222 Brassica carinata HOM05D000313 ORTHO05D000065 4.0e-08 62.0 43 65.1
A01p36390 Brassica napus HOM05D000096 ORTHO05D000045 4.0e-08 62.0 65 44.6
BolC9t57614H Brassica oleracea HOM05D000313 ORTHO05D000065 4.0e-08 62.0 75 42.7
BraA09t35833Z Brassica rapa HOM05D000313 ORTHO05D000065 4.0e-08 62.0 65 44.6
A07p36100 Brassica napus HOM05D000313 ORTHO05D000065 6.8e-08 61.2 56 50.0
A02p30140 Brassica napus HOM05D000313 ORTHO05D021705 8.9e-08 60.8 66 47.0
C09p57200 Brassica napus HOM05D000313 ORTHO05D000065 8.9e-08 60.8 65 46.2
BcaB08g35222 Brassica carinata HOM05D000313 ORTHO05D000065 1.2e-07 60.5 65 43.1
A01p33560 Brassica napus HOM05D000313 ORTHO05D000065 1.5e-07 60.1 65 53.8
BolC1t03161H Brassica oleracea HOM05D000313 ORTHO05D000065 1.5e-07 60.1 65 46.2
BraA05t20559Z Brassica rapa HOM05D000313 ORTHO05D000065 1.5e-07 60.1 45 62.2
BcaC02g10703 Brassica carinata HOM05D000313 ORTHO05D000065 2.0e-07 59.7 82 40.2
BcaC05g25841 Brassica carinata HOM05D000313 ORTHO05D000065 2.0e-07 59.7 57 47.4
C02p29080 Brassica napus HOM05D000041 ORTHO05D000065 2.0e-07 59.7 48 60.4
C04p26900 Brassica napus HOM05D000313 ORTHO05D000065 2.0e-07 59.7 82 40.2
BolC2t09876H Brassica oleracea HOM05D000313 ORTHO05D000065 2.0e-07 59.7 65 43.1
BolC9t58587H Brassica oleracea HOM05D000313 ORTHO05D000065 2.0e-07 59.7 65 44.6
C08p36900 Brassica napus HOM05D000313 ORTHO05D000065 2.6e-07 59.3 65 41.5
BolC9t55362H Brassica oleracea HOM05D000313 ORTHO05D000065 2.6e-07 59.3 79 39.2
BolC3t20537H Brassica oleracea HOM05D000313 ORTHO05D000065 3.4e-07 58.9 75 44.0
A09p63130 Brassica napus HOM05D000313 ORTHO05D000065 4.4e-07 58.5 62 50.0
BraA09t41667Z Brassica rapa HOM05D000313 ORTHO05D000065 4.4e-07 58.5 62 50.0
BcaC05g27392 Brassica carinata HOM05D000313 ORTHO05D000065 5.8e-07 58.2 65 41.5
A10p20990 Brassica napus HOM05D000313 ORTHO05D000065 5.8e-07 58.2 40 67.5
BolC7t40964H Brassica oleracea HOM05D000313 ORTHO05D000065 5.8e-07 58.2 65 46.2
BcaNung02470 Brassica carinata HOM05D000313 ORTHO05D000065 7.5e-07 57.8 65 41.5
C02p57090 Brassica napus HOM05D000313 ORTHO05D000065 7.5e-07 57.8 71 42.3
C07p40630 Brassica napus HOM05D000313 ORTHO05D000065 7.5e-07 57.8 65 41.5
A02p22940 Brassica napus HOM05D000313 ORTHO05D000065 9.8e-07 57.4 46 58.7
A03p56240 Brassica napus HOM05D000313 ORTHO05D000065 9.8e-07 57.4 46 58.7
C05p50150 Brassica napus HOM05D000313 ORTHO05D000065 1.3e-06 57.0 65 41.5
BcaC07g36843 Brassica carinata HOM05D000313 ORTHO05D000065 2.2e-06 56.2 62 45.2
A01p21080 Brassica napus HOM05D000313 ORTHO05D000065 2.9e-06 55.8 40 65.0
A03p13160 Brassica napus HOM05D000313 ORTHO05D000065 2.9e-06 55.8 44 59.1
A05p31520 Brassica napus HOM05D000313 ORTHO05D000065 2.9e-06 55.8 40 65.0
C09p24470 Brassica napus HOM05D000313 ORTHO05D000065 2.9e-06 55.8 80 41.2
BcaB06g26638 Brassica carinata HOM05D000313 ORTHO05D000065 3.7e-06 55.5 65 44.6
BcaB07g33685 Brassica carinata HOM05D000313 ORTHO05D000065 3.7e-06 55.5 65 38.5
BcaB07g33686 Brassica carinata HOM05D000313 ORTHO05D000065 3.7e-06 55.5 65 38.5
BcaC04g18606 Brassica carinata HOM05D000313 ORTHO05D000065 3.7e-06 55.5 65 44.6
A09p24570 Brassica napus HOM05D000313 ORTHO05D000065 3.7e-06 55.5 65 36.9
C01p38920 Brassica napus HOM05D000313 ORTHO05D000065 3.7e-06 55.5 74 45.9
C05p47720 Brassica napus HOM05D000313 ORTHO05D000065 3.7e-06 55.5 65 40.0
BolC1t03842H Brassica oleracea HOM05D000313 ORTHO05D000065 3.7e-06 55.5 74 45.9
BraA03t12859Z Brassica rapa HOM05D000313 ORTHO05D000065 3.7e-06 55.5 76 40.8
BraA06t24916Z Brassica rapa HOM05D000313 ORTHO05D000065 3.7e-06 55.5 65 36.9
BraA10t43815Z Brassica rapa HOM05D000313 ORTHO05D000065 3.7e-06 55.5 54 50.0
BcaC07g37361 Brassica carinata HOM05D000313 ORTHO05D000065 4.9e-06 55.1 103 38.8
C08p08080 Brassica napus HOM05D000313 ORTHO05D000065 4.9e-06 55.1 103 38.8
BolC5t29849H Brassica oleracea HOM05D000313 ORTHO05D000065 4.9e-06 55.1 65 38.5
BolC8t47661H Brassica oleracea HOM05D000313 ORTHO05D000065 4.9e-06 55.1 103 38.8
Thhalv10005644m.g Eutrema salsugineum HOM05D000313 ORTHO05D000065 4.9e-06 55.1 62 41.9
BcaC01g00165 Brassica carinata HOM05D000313 ORTHO05D000065 6.4e-06 54.7 66 43.9
BcaC05g28504 Brassica carinata HOM05D000313 ORTHO05D000065 6.4e-06 54.7 65 44.6
C01p21020 Brassica napus HOM05D000313 ORTHO05D000065 6.4e-06 54.7 65 38.5
C05p33380 Brassica napus HOM05D000313 ORTHO05D000065 6.4e-06 54.7 65 40.0
BolC5t33306H Brassica oleracea HOM05D000313 ORTHO05D000065 6.4e-06 54.7 65 44.6
Sp1g29160 Schrenkiella parvula HOM05D000305 ORTHO05D000065 6.4e-06 54.7 67 37.3
Sp5g20210 Schrenkiella parvula HOM05D000305 ORTHO05D000065 6.4e-06 54.7 97 34.0
BcaB07g33988 Brassica carinata HOM05D000313 ORTHO05D000065 8.3e-06 54.3 50 52.0


User provided reference genes

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