Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g23589 Brassica carinata HOM05D004342 ORTHO05D011040 9.1e-161 570.1 270 100.0
BcaB01g01402 Brassica carinata HOM05D004342 ORTHO05D011040 1.9e-121 439.5 275 78.9
BcaB08g35473 Brassica carinata HOM05D004342 ORTHO05D011040 2.4e-121 439.1 275 78.9
BcaB03g16647 Brassica carinata HOM05D004342 ORTHO05D011040 7.1e-121 437.6 275 78.5
BraA02t07939Z Brassica rapa HOM05D004342 ORTHO05D107931 2.5e-118 429.1 275 75.3
BolC4t24121H Brassica oleracea HOM05D004342 ORTHO05D011040 3.3e-118 428.7 275 76.4
BolC4t26257H Brassica oleracea HOM05D004342 ORTHO05D011040 3.3e-118 428.7 275 75.3
C04p46690 Brassica napus HOM05D004342 ORTHO05D011040 1.3e-117 426.8 271 74.9
BcaC03g15908 Brassica carinata HOM05D004342 ORTHO05D011040 1.1e-116 423.7 271 75.3
C04p26830 Brassica napus HOM05D004342 ORTHO05D011040 6.9e-116 421.0 271 74.5
BcaB05g23725 Brassica carinata HOM05D004342 ORTHO05D011040 4.4e-115 418.3 270 78.5
BcaB07g32852 Brassica carinata HOM05D004342 ORTHO05D011040 1.9e-113 412.9 270 77.4
BcaC05g27753 Brassica carinata HOM05D004342 ORTHO05D032754 6.6e-111 404.4 250 77.6
BolC9t58505H Brassica oleracea HOM05D004342 ORTHO05D011040 2.5e-110 402.5 271 74.5
C09p56360 Brassica napus HOM05D004342 ORTHO05D011040 3.3e-110 402.1 271 73.4
BcaC04g19377 Brassica carinata HOM05D004342 ORTHO05D011040 2.8e-109 399.1 271 73.1
BcaB06g27914 Brassica carinata HOM05D004342 ORTHO05D011040 2.0e-107 392.9 274 70.8
BcaB08g35285 Brassica carinata HOM05D004342 ORTHO05D011040 2.6e-107 392.5 273 70.3
BcaB01g02102 Brassica carinata HOM05D004342 ORTHO05D011040 1.3e-106 390.2 273 70.0
BcaB08g35403 Brassica carinata HOM05D004342 ORTHO05D011040 1.7e-106 389.8 275 72.0
BcaB05g23453 Brassica carinata HOM05D004342 ORTHO05D011040 4.9e-106 388.3 273 69.6
C03p70160 Brassica napus HOM05D004342 ORTHO05D011040 2.4e-105 386.0 243 76.1
BraA04t16111Z Brassica rapa HOM05D004342 ORTHO05D011040 7.9e-104 380.9 275 70.2
BolC6t36906H Brassica oleracea HOM05D004342 ORTHO05D011040 7.4e-102 374.4 266 68.4
C02p48390 Brassica napus HOM05D004342 ORTHO05D011040 4.8e-101 371.7 275 68.7
BolC2t10870H Brassica oleracea HOM05D004342 ORTHO05D011040 4.8e-101 371.7 275 68.7
BcaC08g47011 Brassica carinata HOM05D004342 ORTHO05D011040 1.8e-100 369.8 270 67.0
BcaB02g06560 Brassica carinata HOM05D004342 ORTHO05D011040 1.7e-98 363.2 273 67.0
BcaB08g35544 Brassica carinata HOM05D004342 ORTHO05D011040 2.9e-98 362.5 273 65.9
BcaB02g10664 Brassica carinata HOM05D004342 ORTHO05D011040 4.9e-98 361.7 270 66.3
BraA01t02418Z Brassica rapa HOM05D004342 ORTHO05D011040 6.5e-98 361.3 276 69.2
BcaB06g27477 Brassica carinata HOM05D004342 ORTHO05D011040 3.5e-96 355.5 273 65.2
BcaB03g16622 Brassica carinata HOM05D004342 ORTHO05D011040 1.0e-95 354.0 273 64.8
C07p02600 Brassica napus HOM05D004342 ORTHO05D040391 1.5e-94 350.1 266 64.7
C05p37450 Brassica napus HOM05D004342 ORTHO05D032754 3.3e-94 349.0 205 80.0
BolC7t40658H Brassica oleracea HOM05D004342 ORTHO05D040391 3.3e-94 349.0 266 64.3
BolC3t19271H Brassica oleracea HOM05D004342 ORTHO05D032754 5.8e-91 338.2 267 62.5
BcaB07g33971 Brassica carinata HOM05D004342 ORTHO05D011040 1.9e-89 333.2 263 64.3
BcaB04g18145 Brassica carinata HOM05D004342 ORTHO05D011040 1.6e-88 330.1 270 62.2
BcaC03g16189 Brassica carinata HOM05D004342 ORTHO05D011040 4.3e-86 322.0 271 62.4
BolC5t33355H Brassica oleracea HOM05D004342 ORTHO05D016748 7.4e-86 321.2 215 70.7
BolC2t09673H Brassica oleracea HOM05D004342 ORTHO05D042860 9.7e-86 320.9 275 62.2
C06p17080 Brassica napus HOM05D004342 ORTHO05D016748 2.2e-85 319.7 209 73.2
BolC8t47840H Brassica oleracea HOM05D004342 ORTHO05D016748 3.7e-85 318.9 209 73.2
BolC7t40696H Brassica oleracea HOM05D004342 ORTHO05D042740 4.8e-85 318.5 266 59.8
C07p03020 Brassica napus HOM05D004342 ORTHO05D042740 9.0e-84 314.3 266 59.0
C05p46270 Brassica napus HOM05D004342 ORTHO05D016748 1.5e-83 313.5 248 63.3
A02p29080 Brassica napus HOM05D004342 ORTHO05D042860 5.1e-79 298.5 264 59.1
BolC3t21133H Brassica oleracea HOM05D004342 ORTHO05D016748 8.2e-77 291.2 202 70.3
C05p32840 Brassica napus HOM05D004342 ORTHO05D041540 1.2e-75 287.3 266 54.9
BolC5t32015H Brassica oleracea HOM05D004342 ORTHO05D041540 4.5e-75 285.4 266 54.5
BcaB02g11238 Brassica carinata HOM05D004342 ORTHO05D011040 6.7e-71 271.6 144 89.6
BcaB05g23199 Brassica carinata HOM05D004342 ORTHO05D011040 3.8e-66 255.8 218 61.5
BcaB06g27861 Brassica carinata HOM05D004342 ORTHO05D011040 3.8e-66 255.8 203 65.0
A10p05900 Brassica napus HOM05D004342 ORTHO05D013036 1.4e-63 247.3 168 69.0
A05p21050 Brassica napus HOM05D004342 ORTHO05D013036 1.8e-63 246.9 171 68.4
BolC5t32487H Brassica oleracea HOM05D004342 ORTHO05D016748 1.8e-63 246.9 145 78.6
A06p23950 Brassica napus HOM05D004342 ORTHO05D013036 2.3e-63 246.5 171 68.4
A06p24190 Brassica napus HOM05D004342 ORTHO05D013036 2.3e-63 246.5 168 69.6
C04p30590 Brassica napus HOM05D004342 ORTHO05D097110 3.0e-63 246.1 220 58.2
BraA04t16568Z Brassica rapa HOM05D004342 ORTHO05D013036 8.8e-63 244.6 169 69.8
A05p24900 Brassica napus HOM05D004342 ORTHO05D013036 1.5e-62 243.8 168 69.0
C03p68080 Brassica napus HOM05D004342 ORTHO05D042288 1.5e-62 243.8 263 51.3
BolC3t19031H Brassica oleracea HOM05D004342 ORTHO05D042288 1.5e-62 243.8 263 51.3
A01p25070 Brassica napus HOM05D004342 ORTHO05D011040 3.3e-62 242.7 275 53.5
A02p33870 Brassica napus HOM05D004342 ORTHO05D013036 5.7e-62 241.9 168 68.5
C03p64680 Brassica napus HOM05D004342 ORTHO05D040895 1.3e-61 240.7 207 58.9
BolC8t49973H Brassica oleracea HOM05D004342 ORTHO05D042841 8.2e-61 238.0 217 58.1
A06p14130 Brassica napus HOM05D004342 ORTHO05D013036 4.1e-60 235.7 168 66.7
BcaB07g33403 Brassica carinata HOM05D004342 ORTHO05D093493 7.0e-60 235.0 152 78.9
BcaC01g01958 Brassica carinata HOM05D004342 ORTHO05D090434 2.6e-59 233.0 139 77.0
BcaC08g44285 Brassica carinata HOM05D004342 ORTHO05D016748 3.5e-59 232.6 151 74.8
BraA09t39012Z Brassica rapa HOM05D004342 ORTHO05D041860 1.3e-58 230.7 211 58.3
BolC2t09619H Brassica oleracea HOM05D004342 ORTHO05D033291 8.5e-58 228.0 266 48.5
C08p23450 Brassica napus HOM05D004342 ORTHO05D042841 1.5e-57 227.3 264 48.5
BcaB06g27355 Brassica carinata HOM05D004342 ORTHO05D011040 1.9e-57 226.9 273 46.5
A09p34820 Brassica napus HOM05D004342 ORTHO05D041860 7.2e-57 224.9 210 57.1
BraSC35t45984Z Brassica rapa HOM05D004342 ORTHO05D014936 2.1e-56 223.4 153 73.9
A10p08140 Brassica napus HOM05D004342 ORTHO05D014936 2.7e-56 223.0 153 74.5
BcaB02g07288 Brassica carinata HOM05D004342 ORTHO05D016748 1.0e-55 221.1 150 75.3
C02p36040 Brassica napus HOM05D004342 ORTHO05D033291 8.8e-55 218.0 266 47.0
BolC2t09984H Brassica oleracea HOM05D004342 ORTHO05D107287 8.8e-55 218.0 291 45.4
A04p03900 Brassica napus HOM05D004342 ORTHO05D018601 2.8e-53 213.0 128 81.2
C02p36010 Brassica napus HOM05D004342 ORTHO05D033291 3.7e-53 212.6 260 47.3
BcaC01g01112 Brassica carinata HOM05D004342 ORTHO05D016748 8.3e-53 211.5 147 71.4
C08p05970 Brassica napus HOM05D004342 ORTHO05D098872 7.0e-52 208.4 184 58.2
BolC3t18726H Brassica oleracea HOM05D004342 ORTHO05D040895 9.1e-52 208.0 207 52.7
C06p19750 Brassica napus HOM05D003441 ORTHO05D004516 7.7e-51 204.9 219 53.0
BraA10t42852Z Brassica rapa HOM05D004342 ORTHO05D013036 1.3e-50 204.1 152 64.5
BcaB01g02523 Brassica carinata HOM05D004342 ORTHO05D016748 2.2e-50 203.4 150 68.0
BraA06t25485Z Brassica rapa HOM05D004342 ORTHO05D013036 2.1e-48 196.8 149 63.8
BraA10t43034Z Brassica rapa HOM05D004342 ORTHO05D013036 1.4e-47 194.1 152 62.5
BraA01t02499Z Brassica rapa HOM05D004342 ORTHO05D013036 2.3e-47 193.4 149 63.1
BraA02t08405Z Brassica rapa HOM05D004342 ORTHO05D013036 2.3e-47 193.4 149 63.1
BcaB04g18376 Brassica carinata HOM05D004342 ORTHO05D018601 1.2e-46 191.0 128 71.9
BraA06t24546Z Brassica rapa HOM05D004342 ORTHO05D013036 2.6e-46 189.9 149 61.7
C02p39690 Brassica napus HOM05D004342 ORTHO05D014936 7.5e-46 188.3 130 72.3
C03p88250 Brassica napus HOM05D004342 ORTHO05D018601 1.7e-45 187.2 134 70.1
A03p66330 Brassica napus HOM05D000062 ORTHO05D000043 6.3e-45 185.3 137 68.6
C07p14140 Brassica napus HOM05D004342 ORTHO05D014936 8.3e-45 184.9 130 70.8
BolC7t41910H Brassica oleracea HOM05D004342 ORTHO05D014936 2.4e-44 183.3 130 70.8
BcaB01g01175 Brassica carinata HOM05D004342 ORTHO05D018601 3.1e-44 183.0 140 65.7
BolC8t47411H Brassica oleracea HOM05D004342 ORTHO05D106550 5.4e-44 182.2 259 42.1
C03p67290 Brassica napus HOM05D004342 ORTHO05D033138 1.3e-42 177.6 212 46.7
C07p09210 Brassica napus HOM05D004342 ORTHO05D014936 1.3e-42 177.6 124 68.5
BolC7t41332H Brassica oleracea HOM05D004342 ORTHO05D014936 1.3e-42 177.6 124 68.5
BolSC21t60296H Brassica oleracea HOM05D004342 ORTHO05D033138 1.3e-42 177.6 212 46.7
A07p06040 Brassica napus HOM05D004342 ORTHO05D101341 9.5e-41 171.4 175 52.6
A03p64730 Brassica napus HOM05D004342 ORTHO05D013036 3.6e-40 169.5 119 67.2
BolC2t08690H Brassica oleracea HOM05D004342 ORTHO05D040487 4.4e-38 162.5 270 38.5
A07p06290 Brassica napus HOM05D004342 ORTHO05D099060 9.8e-38 161.4 118 66.1
C02p26240 Brassica napus HOM05D004342 ORTHO05D040487 2.9e-37 159.8 270 37.4
BcaB04g17938 Brassica carinata HOM05D004342 ORTHO05D011040 8.3e-37 158.3 101 71.3
C05p42390 Brassica napus HOM05D004342 ORTHO05D041824 4.1e-36 156.0 140 56.4
BolC5t32968H Brassica oleracea HOM05D004342 ORTHO05D041824 4.1e-36 156.0 140 56.4
C01p35180 Brassica napus HOM05D004342 ORTHO05D028050 1.2e-35 154.5 169 49.1
BolC1t03477H Brassica oleracea HOM05D004342 ORTHO05D028050 1.2e-35 154.5 169 49.1
A01p27340 Brassica napus HOM05D004342 ORTHO05D028050 5.9e-35 152.1 169 47.9
BraA01t02874Z Brassica rapa HOM05D004342 ORTHO05D028050 5.9e-35 152.1 169 47.9
C02p40200 Brassica napus HOM05D004342 ORTHO05D014936 6.6e-34 148.7 123 58.5
C02p40210 Brassica napus HOM05D004342 ORTHO05D018674 6.6e-34 148.7 113 63.7
BcaB08g34712 Brassica carinata HOM05D004342 ORTHO05D011040 2.8e-32 143.3 273 35.2
A01p28260 Brassica napus HOM05D004342 ORTHO05D014936 2.8e-32 143.3 105 65.7
BraA03t15693Z Brassica rapa HOM05D004342 ORTHO05D027051 7.5e-30 135.2 83 75.9
BraSC35t45983Z Brassica rapa HOM05D004342 ORTHO05D018674 2.2e-29 133.7 86 70.9
C02p39700 Brassica napus HOM05D004342 ORTHO05D099964 2.9e-29 133.3 122 57.4
A06p35820 Brassica napus HOM05D004342 ORTHO05D013036 1.9e-28 130.6 93 68.8
A06p19230 Brassica napus HOM05D004342 ORTHO05D018601 2.4e-28 130.2 93 68.8
BraA07t27945Z Brassica rapa HOM05D004342 ORTHO05D014936 9.2e-28 128.3 106 60.4
BcaC07g39329 Brassica carinata HOM05D004342 ORTHO05D018601 1.2e-27 127.9 100 65.0
BcaC06g36550 Brassica carinata HOM05D004342 ORTHO05D018601 1.5e-25 120.9 89 67.4
BcaB08g35573 Brassica carinata HOM05D004342 ORTHO05D018674 3.3e-25 119.8 73 74.0
BolC2t10046H Brassica oleracea HOM05D004342 ORTHO05D018674 4.7e-24 115.9 106 57.5
BraA05t21009Z Brassica rapa HOM05D004342 ORTHO05D013036 4.7e-24 115.9 97 58.8
BolC6t36414H Brassica oleracea HOM05D004342 ORTHO05D042454 1.1e-23 114.8 117 51.3
BolC7t41081H Brassica oleracea HOM05D004342 ORTHO05D042200 2.3e-23 113.6 150 43.3
A10p08150 Brassica napus HOM05D004342 ORTHO05D018674 6.8e-23 112.1 67 73.1
C07p06590 Brassica napus HOM05D004342 ORTHO05D042200 8.9e-23 111.7 150 43.3
BraA06t25909Z Brassica rapa HOM05D004342 ORTHO05D013036 3.4e-22 109.8 94 57.4
BcaB07g33226 Brassica carinata HOM05D004342 ORTHO05D014936 1.3e-21 107.8 106 55.7
C07p09200 Brassica napus HOM05D004342 ORTHO05D096449 1.3e-21 107.8 82 64.6
A03p66340 Brassica napus HOM05D004342 ORTHO05D018674 2.2e-21 107.1 70 68.6
BraA03t15692Z Brassica rapa HOM05D004342 ORTHO05D018674 2.2e-21 107.1 70 68.6
C01p33380 Brassica napus HOM05D004342 ORTHO05D101940 4.9e-21 105.9 90 61.1
BraA03t15562Z Brassica rapa HOM05D004342 ORTHO05D014936 3.2e-20 103.2 69 75.4
BolC6t39191H Brassica oleracea HOM05D004342 ORTHO05D041978 9.2e-20 101.7 100 55.0
BcaB06g27423 Brassica carinata HOM05D004342 ORTHO05D027051 2.1e-19 100.5 98 59.2
BraA07t28391Z Brassica rapa HOM05D004342 ORTHO05D014936 2.1e-19 100.5 90 61.1
BcaB02g10428 Brassica carinata HOM05D004342 ORTHO05D018674 4.6e-19 99.4 50 90.0
BcaC06g35994 Brassica carinata HOM05D004342 ORTHO05D027051 2.8e-16 90.1 60 76.7
BcaC03g16937 Brassica carinata HOM05D004342 ORTHO05D027051 6.2e-16 89.0 51 84.3
C06p12600 Brassica napus HOM05D004342 ORTHO05D042454 3.1e-15 86.7 119 42.0
BraA06t26508Z Brassica rapa HOM05D004342 ORTHO05D013036 4.4e-14 82.8 74 58.1
BraA06t25627Z Brassica rapa HOM05D004342 ORTHO05D107595 4.9e-13 79.3 73 53.4
C06p42390 Brassica napus HOM05D004342 ORTHO05D041978 6.4e-13 79.0 77 54.5
BraA07t27946Z Brassica rapa HOM05D004342 ORTHO05D108557 1.1e-12 78.2 50 68.0
BraA06t25007Z Brassica rapa HOM05D004342 ORTHO05D018601 5.4e-12 75.9 108 40.7
BcaB07g33404 Brassica carinata HOM05D004342 ORTHO05D095904 1.7e-10 70.9 61 54.1
BraA06t25628Z Brassica rapa HOM05D004342 ORTHO05D033138 1.1e-07 61.6 123 34.1


User provided reference genes

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