Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g23579 Brassica carinata HOM05D019618 ORTHO05D000267 3.4e-49 198.0 98 100.0
BcaB02g11167 Brassica carinata HOM05D019618 ORTHO05D000267 4.4e-28 127.9 64 92.2
Sp1g27250 Schrenkiella parvula HOM05D000040 ORTHO05D000267 9.7e-20 100.1 75 65.3
AL1G49600 Arabidopsis lyrata HOM05D000040 ORTHO05D000267 1.7e-19 99.4 77 63.6
Thhalv10009809m.g Eutrema salsugineum HOM05D000040 ORTHO05D000267 1.1e-18 96.7 75 62.7
BcaC04g19804 Brassica carinata HOM05D019618 ORTHO05D091800 3.1e-18 95.1 104 54.8
AT1G31450 Arabidopsis thaliana HOM05D000040 ORTHO05D000267 4.1e-18 94.7 75 62.7
BcaB07g32804 Brassica carinata HOM05D000040 ORTHO05D000267 7.0e-18 94.0 73 64.4
A09p34790 Brassica napus HOM05D000040 ORTHO05D000267 5.9e-17 90.9 74 63.5
BraA09t39009Z Brassica rapa HOM05D000040 ORTHO05D000267 5.9e-17 90.9 74 63.5
BcaC05g27173 Brassica carinata HOM05D000040 ORTHO05D000267 7.7e-17 90.5 74 63.5
C05p30700 Brassica napus HOM05D000040 ORTHO05D000267 7.7e-17 90.5 74 63.5
BolC5t31801H Brassica oleracea HOM05D000040 ORTHO05D000267 7.7e-17 90.5 74 63.5
Carub.0001s2987 Capsella rubella HOM05D000040 ORTHO05D000267 1.0e-16 90.1 77 62.3
AL5G14800 Arabidopsis lyrata HOM05D000040 ORTHO05D000267 2.2e-16 89.0 69 62.3
CARHR030970 Cardamine hirsuta HOM05D000040 ORTHO05D000267 6.5e-16 87.4 74 58.1
THA.LOC104814379 Tarenaya hassleriana HOM05D000040 ORTHO05D000267 1.2e-14 83.2 76 57.9
Thhalv10017839m.g Eutrema salsugineum HOM05D000040 ORTHO05D000267 4.7e-14 81.3 77 55.8
Aa31LG3G7720 Aethionema arabicum HOM05D000040 ORTHO05D000267 3.4e-12 75.1 73 53.4
C04p64440 Brassica napus HOM05D000040 ORTHO05D000267 7.5e-12 73.9 70 54.3
BcaB06g28852 Brassica carinata HOM05D000040 ORTHO05D000267 9.8e-12 73.6 70 54.3
BcaNung06944 Brassica carinata HOM05D000040 ORTHO05D000267 9.8e-12 73.6 70 54.3
A03p19590 Brassica napus HOM05D000040 ORTHO05D000267 9.8e-12 73.6 79 51.9
BraA03t11212Z Brassica rapa HOM05D000040 ORTHO05D000267 9.8e-12 73.6 79 51.9
Carub.0004s1732 Capsella rubella HOM05D000040 ORTHO05D000267 1.3e-11 73.2 77 49.4
BolC4t27928H Brassica oleracea HOM05D000040 ORTHO05D000267 1.7e-11 72.8 70 52.9
BraA04t18204Z Brassica rapa HOM05D000040 ORTHO05D000267 1.7e-11 72.8 70 52.9
CARHR129820 Cardamine hirsuta HOM05D000040 ORTHO05D000267 1.7e-11 72.8 77 50.6
BcaB02g09408 Brassica carinata HOM05D000040 ORTHO05D000267 1.1e-10 70.1 70 51.4
BcaB02g09409 Brassica carinata HOM05D000040 ORTHO05D023865 1.1e-10 70.1 70 51.4
BcaC02g11681 Brassica carinata HOM05D000040 ORTHO05D000267 1.1e-10 70.1 71 50.7
AL4G31680 Arabidopsis lyrata HOM05D000040 ORTHO05D000267 1.4e-10 69.7 77 48.1
C04p12450 Brassica napus HOM05D000040 ORTHO05D000267 1.4e-10 69.7 71 50.7
BolC4t22894H Brassica oleracea HOM05D000040 ORTHO05D000267 1.4e-10 69.7 71 50.7
A05p10080 Brassica napus HOM05D000040 ORTHO05D000267 7.0e-10 67.4 76 44.7
BraA05t19949Z Brassica rapa HOM05D000040 ORTHO05D000267 7.0e-10 67.4 76 44.7
AT2G35615 Arabidopsis thaliana HOM05D000040 ORTHO05D000267 1.2e-09 66.6 77 44.2
Aa31LG2G14500 Aethionema arabicum HOM05D000040 ORTHO05D000267 1.6e-09 66.2 79 50.6
BolC3t14684H Brassica oleracea HOM05D000040 ORTHO05D000267 3.5e-09 65.1 79 46.8
Sp4g17850 Schrenkiella parvula HOM05D000040 ORTHO05D000267 3.5e-09 65.1 70 45.7
BcaC01g05721 Brassica carinata HOM05D000040 ORTHO05D000267 1.3e-08 63.2 79 45.6
C03p22850 Brassica napus HOM05D000040 ORTHO05D000267 1.7e-08 62.8 79 45.6
CARHR129830 Cardamine hirsuta HOM05D000040 ORTHO05D000267 2.2e-08 62.4 69 47.8
Sabra03G0072300 Salix brachista HOM05D000040 ORTHO05D000267 4.2e-07 58.2 71 43.7
DCAR_006788 Daucus carota HOM05D000040 ORTHO05D000267 9.4e-07 57.0 72 43.1
Thecc.03G323600 Theobroma cacao HOM05D000040 ORTHO05D000267 3.6e-06 55.1 86 39.5
DCAR_021956 Daucus carota HOM05D000040 ORTHO05D000267 6.1e-06 54.3 67 43.3
Potri.003G105300 Populus trichocarpa HOM05D000040 ORTHO05D000267 8.0e-06 53.9 71 42.3


User provided reference genes

Program Settings