Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g23567 Brassica carinata HOM05D000313 ORTHO05D019939 9.7e-71 270.0 134 100.0
BcaB06g28052 Brassica carinata HOM05D000313 ORTHO05D019939 2.2e-67 258.8 135 97.0
C03p72030 Brassica napus HOM05D000313 ORTHO05D000065 8.6e-19 97.4 107 51.4
BolC3t19501H Brassica oleracea HOM05D000313 ORTHO05D000065 1.6e-17 93.2 107 50.5
BcaC04g20831 Brassica carinata HOM05D000313 ORTHO05D000065 3.4e-15 85.5 54 75.9
C09p38710 Brassica napus HOM05D000313 ORTHO05D000065 3.4e-15 85.5 54 75.9
BolC9t56725H Brassica oleracea HOM05D000313 ORTHO05D000065 3.4e-15 85.5 54 75.9
BcaC02g12357 Brassica carinata HOM05D000313 ORTHO05D000065 1.4e-13 80.1 78 53.8
C04p04790 Brassica napus HOM05D000313 ORTHO05D000065 1.4e-13 80.1 78 53.8
BolC4t22110H Brassica oleracea HOM05D000313 ORTHO05D000065 1.4e-13 80.1 78 53.8
C07p29470 Brassica napus HOM05D000313 ORTHO05D000065 3.2e-13 79.0 96 49.0
BcaC02g08554 Brassica carinata HOM05D000313 ORTHO05D000065 7.1e-13 77.8 54 64.8
BcaC08g44549 Brassica carinata HOM05D000313 ORTHO05D000065 7.1e-13 77.8 75 54.7
BcaC02g08920 Brassica carinata HOM05D000313 ORTHO05D000065 9.2e-13 77.4 78 52.6
C04p49110 Brassica napus HOM05D000313 ORTHO05D000065 9.2e-13 77.4 78 52.6
BolC4t26494H Brassica oleracea HOM05D000313 ORTHO05D000065 9.2e-13 77.4 78 52.6
BcaC01g00423 Brassica carinata HOM05D000313 ORTHO05D017517 1.2e-12 77.0 65 63.1
A10p12060 Brassica napus HOM05D000313 ORTHO05D000065 1.6e-12 76.6 78 51.3
A05p21270 Brassica napus HOM05D000313 ORTHO05D000065 3.5e-12 75.5 78 51.3
C09p33280 Brassica napus HOM05D000313 ORTHO05D000065 3.5e-12 75.5 76 52.6
BolC9t56164H Brassica oleracea HOM05D000313 ORTHO05D000065 3.5e-12 75.5 76 52.6
BraA09t39507Z Brassica rapa HOM05D000313 ORTHO05D000065 3.5e-12 75.5 59 61.0
BolC7t43682H Brassica oleracea HOM05D000313 ORTHO05D000065 4.6e-12 75.1 78 52.6
BolC5t30506H Brassica oleracea HOM05D000313 ORTHO05D000065 6.0e-12 74.7 78 51.3
BcaB01g02353 Brassica carinata HOM05D000313 ORTHO05D000065 1.0e-11 73.9 62 54.8
A01p17050 Brassica napus HOM05D000313 ORTHO05D000065 1.0e-11 73.9 71 53.5
BcaC06g34226 Brassica carinata HOM05D000313 ORTHO05D000065 1.3e-11 73.6 59 61.0
C08p27740 Brassica napus HOM05D000313 ORTHO05D000065 1.7e-11 73.2 73 52.1
BraA05t21034Z Brassica rapa HOM05D000313 ORTHO05D000065 1.7e-11 73.2 59 59.3
BolC1t03534H Brassica oleracea HOM05D000313 ORTHO05D000065 2.3e-11 72.8 55 63.6
A10p14410 Brassica napus HOM05D000313 ORTHO05D000065 3.0e-11 72.4 73 50.7
C01p35750 Brassica napus HOM05D000313 ORTHO05D000065 3.0e-11 72.4 69 55.1
BcaB03g15252 Brassica carinata HOM05D000313 ORTHO05D000065 3.9e-11 72.0 54 59.3
C03p73930 Brassica napus HOM05D000313 ORTHO05D018464 3.9e-11 72.0 73 50.7
C08p10540 Brassica napus HOM05D000313 ORTHO05D000065 3.9e-11 72.0 92 43.5
BraA04t16524Z Brassica rapa HOM05D000313 ORTHO05D000065 3.9e-11 72.0 48 72.9
BcaC06g35487 Brassica carinata HOM05D000313 ORTHO05D000065 5.1e-11 71.6 73 50.7
BcaC06g35946 Brassica carinata HOM05D000313 ORTHO05D017517 5.1e-11 71.6 63 60.3
A09p23680 Brassica napus HOM05D000313 ORTHO05D000065 5.1e-11 71.6 73 50.7
A09p47000 Brassica napus HOM05D000313 ORTHO05D000065 5.1e-11 71.6 73 50.7
C05p33640 Brassica napus HOM05D000313 ORTHO05D000065 5.1e-11 71.6 69 56.5
C07p15520 Brassica napus HOM05D000313 ORTHO05D000065 5.1e-11 71.6 73 50.7
BolC5t32095H Brassica oleracea HOM05D000313 ORTHO05D000065 5.1e-11 71.6 69 56.5
BolC7t42040H Brassica oleracea HOM05D000313 ORTHO05D000065 5.1e-11 71.6 73 50.7
BraA09t40166Z Brassica rapa HOM05D000313 ORTHO05D000065 5.1e-11 71.6 73 50.7
C07p23830 Brassica napus HOM05D000313 ORTHO05D000065 6.6e-11 71.2 69 53.6
BcaB04g16903 Brassica carinata HOM05D000313 ORTHO05D000065 1.1e-10 70.5 74 48.6
C01p04300 Brassica napus HOM05D000313 ORTHO05D000065 1.1e-10 70.5 78 48.7
BolC2t09854H Brassica oleracea HOM05D000313 ORTHO05D000065 1.1e-10 70.5 78 48.7
A08p20960 Brassica napus HOM05D000313 ORTHO05D000065 1.5e-10 70.1 196 29.1
C05p17990 Brassica napus HOM05D000313 ORTHO05D000065 1.5e-10 70.1 78 50.0
BcaB01g01342 Brassica carinata HOM05D000313 ORTHO05D000065 1.9e-10 69.7 47 76.6
BraA01t04033Z Brassica rapa HOM05D000313 ORTHO05D000065 1.9e-10 69.7 78 47.4
BcaC07g37625 Brassica carinata HOM05D000313 ORTHO05D000065 2.5e-10 69.3 73 50.7
C06p09070 Brassica napus HOM05D000313 ORTHO05D000065 2.5e-10 69.3 66 51.5
BolC6t36836H Brassica oleracea HOM05D000313 ORTHO05D015501 2.5e-10 69.3 56 62.5
BcaB02g10989 Brassica carinata HOM05D000313 ORTHO05D000065 3.3e-10 68.9 54 63.0
A05p19140 Brassica napus HOM05D000313 ORTHO05D000065 3.3e-10 68.9 59 54.2
A08p04810 Brassica napus HOM05D000313 ORTHO05D000065 3.3e-10 68.9 59 54.2
C01p23580 Brassica napus HOM05D000313 ORTHO05D000065 3.3e-10 68.9 87 46.0
C04p21440 Brassica napus HOM05D000313 ORTHO05D000065 3.3e-10 68.9 66 51.5
BraA05t20817Z Brassica rapa HOM05D000313 ORTHO05D000065 3.3e-10 68.9 59 54.2
BcaC05g27737 Brassica carinata HOM05D000313 ORTHO05D000065 4.3e-10 68.6 78 47.4
BcaC05g28354 Brassica carinata HOM05D000313 ORTHO05D000065 4.3e-10 68.6 54 59.3
A01p33560 Brassica napus HOM05D000313 ORTHO05D000065 4.3e-10 68.6 69 52.2
A02p13460 Brassica napus HOM05D000313 ORTHO05D000065 4.3e-10 68.6 78 47.4
A03p45920 Brassica napus HOM05D000313 ORTHO05D000065 4.3e-10 68.6 78 47.4
C02p40980 Brassica napus HOM05D000313 ORTHO05D000065 4.3e-10 68.6 55 60.0
C04p18340 Brassica napus HOM05D000313 ORTHO05D000065 4.3e-10 68.6 55 60.0
C05p37250 Brassica napus HOM05D000313 ORTHO05D000065 4.3e-10 68.6 78 47.4
BraA02t06404Z Brassica rapa HOM05D000313 ORTHO05D000065 4.3e-10 68.6 78 47.4
BcaC02g11117 Brassica carinata HOM05D000313 ORTHO05D000065 5.6e-10 68.2 49 65.3
BcaC03g16075 Brassica carinata HOM05D000022 ORTHO05D013684 5.6e-10 68.2 59 55.9
BcaC06g36731 Brassica carinata HOM05D000313 ORTHO05D000065 5.6e-10 68.2 69 52.2
BolC1t02301H Brassica oleracea HOM05D000313 ORTHO05D000065 5.6e-10 68.2 54 63.0
BolC7t40506H Brassica oleracea HOM05D000313 ORTHO05D000065 5.6e-10 68.2 69 52.2
C01p38920 Brassica napus HOM05D000313 ORTHO05D000065 7.3e-10 67.8 73 50.7
BolC1t03842H Brassica oleracea HOM05D000313 ORTHO05D000065 7.3e-10 67.8 73 50.7
BcaB03g16224 Brassica carinata HOM05D000313 ORTHO05D000065 9.6e-10 67.4 73 49.3
BcaB08g36535 Brassica carinata HOM05D000313 ORTHO05D000065 9.6e-10 67.4 65 53.8
BcaC03g16635 Brassica carinata HOM05D000313 ORTHO05D000065 9.6e-10 67.4 64 51.6
BcaC06g31618 Brassica carinata HOM05D000313 ORTHO05D000065 9.6e-10 67.4 58 56.9
BolC3t16353H Brassica oleracea HOM05D000313 ORTHO05D000065 9.6e-10 67.4 69 52.2
BcaB01g03545 Brassica carinata HOM05D000313 ORTHO05D000065 1.2e-09 67.0 58 55.2
BcaC05g27194 Brassica carinata HOM05D000313 ORTHO05D000065 1.2e-09 67.0 73 50.7
C02p48770 Brassica napus HOM05D000285 ORTHO05D005607 1.2e-09 67.0 62 48.4
BolC5t31824H Brassica oleracea HOM05D000313 ORTHO05D000065 1.2e-09 67.0 73 50.7
BcaC03g15391 Brassica carinata HOM05D000313 ORTHO05D000065 1.6e-09 66.6 69 50.7
C01p43800 Brassica napus HOM05D000313 ORTHO05D000065 1.6e-09 66.6 69 50.7
C05p46420 Brassica napus HOM05D000313 ORTHO05D000065 1.6e-09 66.6 54 57.4
C07p20830 Brassica napus HOM05D000313 ORTHO05D000065 1.6e-09 66.6 71 45.1
BolC1t03159H Brassica oleracea HOM05D000313 ORTHO05D000065 1.6e-09 66.6 69 50.7
BolC3t21647H Brassica oleracea HOM05D000313 ORTHO05D000065 1.6e-09 66.6 73 49.3
BolC7t43562H Brassica oleracea HOM05D000313 ORTHO05D000065 1.6e-09 66.6 69 50.7
BcaB02g11080 Brassica carinata HOM05D000313 ORTHO05D000065 2.1e-09 66.2 56 58.9
C05p31010 Brassica napus HOM05D000313 ORTHO05D000065 2.1e-09 66.2 73 49.3
C09p44110 Brassica napus HOM05D000313 ORTHO05D000065 2.1e-09 66.2 78 46.2
BolC8t47994H Brassica oleracea HOM05D000313 ORTHO05D000065 2.1e-09 66.2 73 49.3
BcaC03g13942 Brassica carinata HOM05D000313 ORTHO05D000065 2.8e-09 65.9 54 57.4
A03p42130 Brassica napus HOM05D000469 ORTHO05D015501 2.8e-09 65.9 63 55.6
C04p20230 Brassica napus HOM05D000313 ORTHO05D000065 2.8e-09 65.9 49 63.3
BolC1t03161H Brassica oleracea HOM05D000313 ORTHO05D000065 2.8e-09 65.9 66 50.0
BolC4t23561H Brassica oleracea HOM05D000313 ORTHO05D000065 2.8e-09 65.9 49 63.3
C03p91860 Brassica napus HOM05D000313 ORTHO05D000065 3.6e-09 65.5 56 57.1
C04p33330 Brassica napus HOM05D000313 ORTHO05D000065 3.6e-09 65.5 56 57.1
C06p16350 Brassica napus HOM05D000469 ORTHO05D015501 3.6e-09 65.5 49 67.3
C06p50290 Brassica napus HOM05D000313 ORTHO05D000065 3.6e-09 65.5 56 57.1
BcaC05g27418 Brassica carinata HOM05D000313 ORTHO05D000065 4.7e-09 65.1 53 60.4
BcaC09g49275 Brassica carinata HOM05D000313 ORTHO05D000065 4.7e-09 65.1 69 50.7
A09p44770 Brassica napus HOM05D000313 ORTHO05D000065 4.7e-09 65.1 51 58.8
C01p40640 Brassica napus HOM05D000313 ORTHO05D000065 4.7e-09 65.1 69 50.7
C04p40420 Brassica napus HOM05D000313 ORTHO05D000065 4.7e-09 65.1 66 50.0
BolC4t25625H Brassica oleracea HOM05D000313 ORTHO05D000065 4.7e-09 65.1 66 50.0
BolC2t10974H Brassica oleracea HOM05D000313 ORTHO05D000065 6.2e-09 64.7 53 52.8
BolC7t40570H Brassica oleracea HOM05D000313 ORTHO05D000065 6.2e-09 64.7 69 50.7
BcaC03g17051 Brassica carinata HOM05D000313 ORTHO05D000065 8.1e-09 64.3 45 66.7
A09p20060 Brassica napus HOM05D000313 ORTHO05D000065 8.1e-09 64.3 54 55.6
A09p62100 Brassica napus HOM05D000469 ORTHO05D015501 8.1e-09 64.3 56 58.9
A10p06270 Brassica napus HOM05D000469 ORTHO05D015501 8.1e-09 64.3 56 58.9
C02p49710 Brassica napus HOM05D000313 ORTHO05D019939 8.1e-09 64.3 45 66.7
C07p48230 Brassica napus HOM05D000313 ORTHO05D015501 8.1e-09 64.3 56 58.9
C09p02910 Brassica napus HOM05D000469 ORTHO05D015501 8.1e-09 64.3 56 58.9
BcaB07g33821 Brassica carinata HOM05D000313 ORTHO05D000065 1.1e-08 63.9 73 45.2
BcaC06g34648 Brassica carinata HOM05D016482 ORTHO05D032447 1.1e-08 63.9 55 52.7
C07p34690 Brassica napus HOM05D000313 ORTHO05D015501 1.4e-08 63.5 52 61.5
BcaC03g15390 Brassica carinata HOM05D000313 ORTHO05D000065 1.8e-08 63.2 54 55.6
BcaC03g17052 Brassica carinata HOM05D000313 ORTHO05D000065 1.8e-08 63.2 54 55.6
BcaC07g37360 Brassica carinata HOM05D000313 ORTHO05D000065 1.8e-08 63.2 64 51.6
BolC8t47660H Brassica oleracea HOM05D000313 ORTHO05D000065 1.8e-08 63.2 64 51.6
BcaC06g36665 Brassica carinata HOM05D000313 ORTHO05D000065 2.4e-08 62.8 69 49.3
BcaC07g37361 Brassica carinata HOM05D000313 ORTHO05D000065 2.4e-08 62.8 80 46.2
C03p84400 Brassica napus HOM05D000313 ORTHO05D000065 2.4e-08 62.8 49 57.1
C07p05650 Brassica napus HOM05D000313 ORTHO05D000065 2.4e-08 62.8 42 71.4
BolC7t40964H Brassica oleracea HOM05D000313 ORTHO05D000065 2.4e-08 62.8 42 71.4
BraA05t20559Z Brassica rapa HOM05D000313 ORTHO05D000065 2.4e-08 62.8 54 55.6
C07p00620 Brassica napus HOM05D000313 ORTHO05D000065 3.1e-08 62.4 69 49.3
BolC2t11051H Brassica oleracea HOM05D000313 ORTHO05D019939 4.0e-08 62.0 45 64.4
BraA05t20927Z Brassica rapa HOM05D000313 ORTHO05D000065 4.0e-08 62.0 51 56.9
BcaC01g05658 Brassica carinata HOM05D000313 ORTHO05D000065 5.2e-08 61.6 55 52.7
BcaC02g07753 Brassica carinata HOM05D000313 ORTHO05D000065 5.2e-08 61.6 69 47.8
BcaC04g20706 Brassica carinata HOM05D000313 ORTHO05D000065 5.2e-08 61.6 38 76.3
C08p08060 Brassica napus HOM05D000313 ORTHO05D000065 5.2e-08 61.6 64 50.0
C09p40090 Brassica napus HOM05D000313 ORTHO05D000065 5.2e-08 61.6 38 76.3
BolC9t56903H Brassica oleracea HOM05D000313 ORTHO05D000065 5.2e-08 61.6 38 76.3
Thhalv10002234m.g Eutrema salsugineum HOM05D000313 ORTHO05D000065 5.2e-08 61.6 86 40.7
BcaB05g22616 Brassica carinata HOM05D000313 ORTHO05D000065 6.8e-08 61.2 54 53.7
BcaB01g01233 Brassica carinata HOM05D000313 ORTHO05D000065 8.9e-08 60.8 57 50.9
BcaC01g04173 Brassica carinata HOM05D000313 ORTHO05D000065 8.9e-08 60.8 55 50.9
BcaC04g22883 Brassica carinata HOM05D000313 ORTHO05D000065 8.9e-08 60.8 74 43.2
C03p44260 Brassica napus HOM05D000313 ORTHO05D000065 8.9e-08 60.8 55 50.9
C09p14250 Brassica napus HOM05D000313 ORTHO05D000065 8.9e-08 60.8 74 43.2
BolC9t54326H Brassica oleracea HOM05D000313 ORTHO05D000065 2.0e-07 59.7 63 47.6
C05p47590 Brassica napus HOM05D000313 ORTHO05D000065 2.6e-07 59.3 54 53.7
C07p25920 Brassica napus HOM05D000313 ORTHO05D000065 2.6e-07 59.3 53 50.9
C08p08080 Brassica napus HOM05D000313 ORTHO05D000065 2.6e-07 59.3 38 73.7
BolC8t47661H Brassica oleracea HOM05D000313 ORTHO05D000065 2.6e-07 59.3 38 73.7
BraA10t43815Z Brassica rapa HOM05D000313 ORTHO05D000065 2.6e-07 59.3 65 47.7
BraA06t24099Z Brassica rapa HOM05D000313 ORTHO05D000065 3.4e-07 58.9 38 76.3
A02p26880 Brassica napus HOM05D000313 ORTHO05D019939 4.4e-07 58.5 63 46.0
BolC7t43114H Brassica oleracea HOM05D000313 ORTHO05D000065 4.4e-07 58.5 52 51.9
BolC7t43564H Brassica oleracea HOM05D000313 ORTHO05D000065 4.4e-07 58.5 64 51.6
BraA02t07699Z Brassica rapa HOM05D000313 ORTHO05D019939 4.4e-07 58.5 63 46.0
BcaB01g05260 Brassica carinata HOM05D000313 ORTHO05D000065 5.8e-07 58.2 38 76.3
BcaB02g07631 Brassica carinata HOM05D000313 ORTHO05D000065 5.8e-07 58.2 57 49.1
BcaC02g10977 Brassica carinata HOM05D000313 ORTHO05D000065 5.8e-07 58.2 56 51.8
BcaNung02333 Brassica carinata HOM05D000313 ORTHO05D000065 5.8e-07 58.2 38 71.1
BcaNung03865 Brassica carinata HOM05D000313 ORTHO05D000065 5.8e-07 58.2 38 71.1
C03p10470 Brassica napus HOM05D000313 ORTHO05D000065 5.8e-07 58.2 38 76.3
C06p05520 Brassica napus HOM05D000313 ORTHO05D000065 5.8e-07 58.2 38 76.3
BolC3t13528H Brassica oleracea HOM05D000313 ORTHO05D000065 5.8e-07 58.2 38 76.3
C03p49020 Brassica napus HOM05D000313 ORTHO05D000065 7.6e-07 57.8 71 43.7
C03p80990 Brassica napus HOM05D000313 ORTHO05D016071 7.6e-07 57.8 67 49.3
C08p13260 Brassica napus HOM05D000313 ORTHO05D016071 7.6e-07 57.8 67 49.3
BolC3t17179H Brassica oleracea HOM05D000313 ORTHO05D000065 7.6e-07 57.8 71 43.7
C06p13790 Brassica napus HOM05D000313 ORTHO05D000065 9.9e-07 57.4 69 46.4
BolC6t36552H Brassica oleracea HOM05D000313 ORTHO05D000065 9.9e-07 57.4 69 46.4
A07p16160 Brassica napus HOM05D000313 ORTHO05D000065 1.3e-06 57.0 45 64.4
C04p23230 Brassica napus HOM05D000313 ORTHO05D016071 1.3e-06 57.0 69 47.8
C06p18280 Brassica napus HOM05D000313 ORTHO05D016071 1.7e-06 56.6 67 49.3
BraA04t16517Z Brassica rapa HOM05D000313 ORTHO05D017517 1.7e-06 56.6 38 68.4
BcaC09g50908 Brassica carinata HOM05D000313 ORTHO05D000065 2.2e-06 56.2 64 48.4
BolC4t27877H Brassica oleracea HOM05D000313 ORTHO05D000065 2.2e-06 56.2 58 48.3
BcaC05g27414 Brassica carinata HOM05D000313 ORTHO05D000065 2.9e-06 55.8 52 55.8
A01p40600 Brassica napus HOM05D000313 ORTHO05D000065 2.9e-06 55.8 38 68.4
C01p05830 Brassica napus HOM05D000313 ORTHO05D016071 2.9e-06 55.8 70 47.1
BolC8t47880H Brassica oleracea HOM05D000313 ORTHO05D019939 2.9e-06 55.8 38 65.8
BraA01t02560Z Brassica rapa HOM05D000313 ORTHO05D000065 2.9e-06 55.8 38 68.4
BraA01t04093Z Brassica rapa HOM05D000313 ORTHO05D000065 2.9e-06 55.8 38 68.4
BcaB05g24793 Brassica carinata HOM05D000313 ORTHO05D000065 3.8e-06 55.5 35 65.7
BcaC07g41522 Brassica carinata HOM05D012282 ORTHO05D000065 3.8e-06 55.5 48 60.4
C08p23910 Brassica napus HOM05D000313 ORTHO05D000065 3.8e-06 55.5 116 31.9
C02p49520 Brassica napus HOM05D000313 ORTHO05D000065 4.9e-06 55.1 42 64.3
C03p61840 Brassica napus HOM05D015043 ORTHO05D012333 4.9e-06 55.1 73 46.6
BolC3t18444H Brassica oleracea HOM05D015043 ORTHO05D012333 4.9e-06 55.1 73 46.6
BcaC03g13378 Brassica carinata HOM05D015043 ORTHO05D012333 6.4e-06 54.7 49 57.1
A02p29900 Brassica napus HOM05D000313 ORTHO05D000065 6.4e-06 54.7 42 64.3
BraA06t25592Z Brassica rapa HOM05D016317 ORTHO05D022000 6.4e-06 54.7 53 50.9
BcaC07g37395 Brassica carinata HOM05D000313 ORTHO05D000065 8.4e-06 54.3 39 69.2
BcaC09g51352 Brassica carinata HOM05D000313 ORTHO05D000065 8.4e-06 54.3 38 68.4
BcaNung00948 Brassica carinata HOM05D015043 ORTHO05D012333 8.4e-06 54.3 49 57.1
BolC8t47704H Brassica oleracea HOM05D000313 ORTHO05D000065 8.4e-06 54.3 39 69.2


User provided reference genes

Program Settings