Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g23566 Brassica carinata HOM05D000200 ORTHO05D091296 2.0e-36 155.2 76 100.0
BcaB06g27997 Brassica carinata HOM05D000200 ORTHO05D000262 3.6e-14 81.3 54 75.9
Sp4g15540 Schrenkiella parvula HOM05D000200 ORTHO05D000262 1.3e-08 62.8 51 64.7
Carub.0004s1470 Capsella rubella HOM05D000200 ORTHO05D000262 1.7e-08 62.4 51 64.7
BcaB02g10539 Brassica carinata HOM05D000200 ORTHO05D000262 6.6e-08 60.5 51 60.8
BcaC02g11412 Brassica carinata HOM05D000200 ORTHO05D000262 6.6e-08 60.5 51 60.8
Thhalv10016129m.g Eutrema salsugineum HOM05D000200 ORTHO05D000262 8.7e-08 60.1 51 62.7
AL4G28870 Arabidopsis lyrata HOM05D000200 ORTHO05D000262 5.6e-07 57.4 51 60.8
AT2G33240 Arabidopsis thaliana HOM05D000200 ORTHO05D000262 5.6e-07 57.4 51 60.8
BolC4t23154H Brassica oleracea HOM05D000200 ORTHO05D000262 9.6e-07 56.6 51 58.8
Thhalv10006545m.g Eutrema salsugineum HOM05D000200 ORTHO05D000262 1.6e-06 55.8 51 60.8
BcaC01g05850 Brassica carinata HOM05D000200 ORTHO05D000262 2.1e-06 55.5 51 56.9
A03p18660 Brassica napus HOM05D000200 ORTHO05D000262 2.1e-06 55.5 51 56.9
C03p21800 Brassica napus HOM05D000200 ORTHO05D000262 2.1e-06 55.5 51 56.9
BolC3t14562H Brassica oleracea HOM05D000200 ORTHO05D000262 2.1e-06 55.5 51 56.9
CARHR003950 Cardamine hirsuta HOM05D000200 ORTHO05D000262 2.1e-06 55.5 51 60.8
Sp1g03440 Schrenkiella parvula HOM05D000200 ORTHO05D000262 2.1e-06 55.5 51 60.8
BraA03t11125Z Brassica rapa HOM05D000200 ORTHO05D000262 2.8e-06 55.1 51 56.9
Aa31LG1G20270 Aethionema arabicum HOM05D000200 ORTHO05D000262 4.7e-06 54.3 51 58.8
A08p36860 Brassica napus HOM05D000200 ORTHO05D000262 4.7e-06 54.3 51 58.8
C04p15850 Brassica napus HOM05D000200 ORTHO05D000262 4.7e-06 54.3 51 56.9
THA.LOC104801057 Tarenaya hassleriana HOM05D000200 ORTHO05D000262 4.7e-06 54.3 51 58.8
AT1G04600 Arabidopsis thaliana HOM05D000200 ORTHO05D000262 6.2e-06 53.9 51 56.9
BraA08t35587Z Brassica rapa HOM05D000200 ORTHO05D000262 6.2e-06 53.9 51 58.8


User provided reference genes

Program Settings