Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g23518 Brassica carinata HOM05D003546 ORTHO05D014122 4.6e-39 164.1 82 100.0
BcaC02g08580 Brassica carinata HOM05D003546 ORTHO05D014122 8.4e-25 116.7 82 75.6
C05p52660 Brassica napus HOM05D003546 ORTHO05D014122 8.4e-25 116.7 82 75.6
BolC4t26808H Brassica oleracea HOM05D003546 ORTHO05D014122 8.4e-25 116.7 82 75.6
A01p26360 Brassica napus HOM05D003546 ORTHO05D014122 1.4e-24 115.9 82 75.6
C04p52320 Brassica napus HOM05D003546 ORTHO05D014122 1.9e-24 115.5 82 74.4
BolC8t52242H Brassica oleracea HOM05D003546 ORTHO05D014122 4.2e-24 114.4 82 74.4
BraA01t02562Z Brassica rapa HOM05D003546 ORTHO05D014122 7.1e-24 113.6 82 74.4
A08p37500 Brassica napus HOM05D003546 ORTHO05D014122 7.9e-23 110.2 82 73.2
BcaC03g14396 Brassica carinata HOM05D003546 ORTHO05D005667 7.9e-15 83.6 63 71.4
BolC2t07938H Brassica oleracea HOM05D003546 ORTHO05D005667 7.9e-15 83.6 63 71.4
C02p18050 Brassica napus HOM05D003546 ORTHO05D005667 1.8e-14 82.4 63 69.8
C04p41100 Brassica napus HOM05D003546 ORTHO05D014122 1.8e-14 82.4 57 70.2
BcaB01g00957 Brassica carinata HOM05D003546 ORTHO05D014122 1.4e-11 72.8 86 52.3
C04p59530 Brassica napus HOM05D003546 ORTHO05D027045 2.2e-09 65.5 78 48.7
BolC4t27459H Brassica oleracea HOM05D003546 ORTHO05D027045 2.2e-09 65.5 78 48.7
C07p60450 Brassica napus HOM05D003546 ORTHO05D027045 6.5e-09 63.9 78 46.2
Thhalv10007918m.g Eutrema salsugineum HOM05D003546 ORTHO05D005667 1.2e-07 59.7 78 48.7
A06p13070 Brassica napus HOM05D003546 ORTHO05D005667 1.6e-07 59.3 78 47.4
AL1G29390 Arabidopsis lyrata HOM05D003546 ORTHO05D005667 2.1e-07 58.9 78 48.7
AT1G17160 Arabidopsis thaliana HOM05D003546 ORTHO05D005667 2.1e-07 58.9 78 50.0
BcaC07g41403 Brassica carinata HOM05D003546 ORTHO05D005667 2.1e-07 58.9 79 53.2
Sp1g15310 Schrenkiella parvula HOM05D003546 ORTHO05D005667 3.5e-07 58.2 78 48.7
BcaC05g25661 Brassica carinata HOM05D003546 ORTHO05D005667 1.0e-06 56.6 62 53.2
Carub.0001s1691 Capsella rubella HOM05D003546 ORTHO05D005667 1.0e-06 56.6 78 48.7
CARHR017740 Cardamine hirsuta HOM05D003546 ORTHO05D005667 1.0e-06 56.6 78 48.7
BcaC03g14253 Brassica carinata HOM05D003546 ORTHO05D005667 1.3e-06 56.2 63 55.6
C05p15580 Brassica napus HOM05D003546 ORTHO05D005667 1.3e-06 56.2 62 51.6
BolC5t30265H Brassica oleracea HOM05D003546 ORTHO05D005667 1.3e-06 56.2 62 53.2
BraA06t24467Z Brassica rapa HOM05D003546 ORTHO05D005667 1.3e-06 56.2 62 51.6
BcaB07g34045 Brassica carinata HOM05D003546 ORTHO05D005667 2.3e-06 55.5 78 47.4
C02p16330 Brassica napus HOM05D003546 ORTHO05D005667 2.3e-06 55.5 63 52.4
BcaC01g00338 Brassica carinata HOM05D003546 ORTHO05D005667 3.0e-06 55.1 78 48.7
C03p78600 Brassica napus HOM05D003546 ORTHO05D005667 3.0e-06 55.1 78 48.7
BcaC02g08004 Brassica carinata HOM05D003546 ORTHO05D027045 3.9e-06 54.7 86 47.7
Aa31LG7G2010 Aethionema arabicum HOM05D003546 ORTHO05D005667 6.7e-06 53.9 78 46.2
A09p60550 Brassica napus HOM05D003546 ORTHO05D005667 6.7e-06 53.9 76 46.1
BraA09t41425Z Brassica rapa HOM05D003546 ORTHO05D005667 6.7e-06 53.9 76 46.1


User provided reference genes

Program Settings