Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g23484 Brassica carinata HOM05D004895 ORTHO05D003385 1.3e-165 586.3 290 100.0
BcaB05g24173 Brassica carinata HOM05D004895 ORTHO05D003385 8.2e-91 337.8 275 66.5
BcaB07g33227 Brassica carinata HOM05D004895 ORTHO05D003385 2.3e-85 319.7 282 61.7
BcaB07g33229 Brassica carinata HOM05D004895 ORTHO05D003385 4.1e-82 308.9 286 61.2
BcaB01g01157 Brassica carinata HOM05D004895 ORTHO05D003385 7.7e-81 304.7 262 64.5
BcaB06g26880 Brassica carinata HOM05D004895 ORTHO05D003385 2.4e-74 283.1 263 60.8
BcaB04g17915 Brassica carinata HOM05D004895 ORTHO05D003385 2.7e-73 279.6 276 57.6
BcaB07g32886 Brassica carinata HOM05D004895 ORTHO05D003385 1.5e-71 273.9 282 56.0
C08p35710 Brassica napus HOM05D004895 ORTHO05D003385 1.2e-68 264.2 289 56.7
BcaB04g17917 Brassica carinata HOM05D004895 ORTHO05D003385 3.4e-68 262.7 265 56.6
BolC8t51162H Brassica oleracea HOM05D004895 ORTHO05D003385 7.5e-68 261.5 289 56.4
A09p52990 Brassica napus HOM05D004895 ORTHO05D003385 2.0e-65 253.4 289 53.3
BraA09t40728Z Brassica rapa HOM05D004895 ORTHO05D003385 3.5e-65 252.7 289 52.9
A09p52950 Brassica napus HOM05D004895 ORTHO05D003385 7.7e-65 251.5 289 52.9
BolC8t51165H Brassica oleracea HOM05D004895 ORTHO05D003385 1.0e-64 251.1 289 53.3
C08p35740 Brassica napus HOM05D004895 ORTHO05D003385 2.9e-64 249.6 289 52.9
BcaC07g40600 Brassica carinata HOM05D004895 ORTHO05D003385 3.2e-63 246.1 289 52.6
A09p53010 Brassica napus HOM05D004895 ORTHO05D003385 9.5e-63 244.6 289 53.3
BraA09t40726Z Brassica rapa HOM05D004895 ORTHO05D003385 1.4e-61 240.7 289 52.6
BraA09t40730Z Brassica rapa HOM05D004895 ORTHO05D003385 1.4e-61 240.7 289 52.6
BcaC07g40599 Brassica carinata HOM05D004895 ORTHO05D003385 1.2e-57 227.6 283 52.3
A09p52940 Brassica napus HOM05D004895 ORTHO05D003385 2.0e-57 226.9 286 50.0
A09p52970 Brassica napus HOM05D004895 ORTHO05D003385 2.0e-57 226.9 286 50.0
BraA09t40727Z Brassica rapa HOM05D004895 ORTHO05D003385 3.8e-56 222.6 280 49.3
C08p35730 Brassica napus HOM05D004895 ORTHO05D003385 7.3e-55 218.4 287 48.8
BcaC07g42640 Brassica carinata HOM05D004895 ORTHO05D003385 9.5e-55 218.0 290 45.5
Sp5g02460 Schrenkiella parvula HOM05D004895 ORTHO05D003385 1.5e-47 194.1 292 43.8
BolC8t51164H Brassica oleracea HOM05D004895 ORTHO05D003385 3.3e-47 193.0 185 61.1
BcaC07g42638 Brassica carinata HOM05D004895 ORTHO05D003385 1.2e-41 174.5 235 46.4
A04p01420 Brassica napus HOM05D004895 ORTHO05D003385 7.5e-36 155.2 197 49.2
BraA04t15861Z Brassica rapa HOM05D004895 ORTHO05D003385 2.2e-35 153.7 197 48.7
BcaC02g10185 Brassica carinata HOM05D004895 ORTHO05D003385 2.9e-35 153.3 197 48.7
C04p31810 Brassica napus HOM05D004895 ORTHO05D003385 2.9e-35 153.3 197 48.7
BolC4t24729H Brassica oleracea HOM05D004895 ORTHO05D003385 2.9e-35 153.3 197 48.7
BcaC02g10179 Brassica carinata HOM05D004895 ORTHO05D003385 4.9e-35 152.5 219 46.6
C04p31900 Brassica napus HOM05D004895 ORTHO05D003385 8.3e-35 151.8 219 46.6
BraA04t15862Z Brassica rapa HOM05D004895 ORTHO05D003385 5.4e-34 149.1 218 46.3
BolC4t24743H Brassica oleracea HOM05D004895 ORTHO05D003385 3.5e-33 146.4 219 46.1
CARHR171180 Cardamine hirsuta HOM05D004895 ORTHO05D003385 4.3e-31 139.4 193 45.1
A09p53020 Brassica napus HOM05D004895 ORTHO05D003385 2.1e-30 137.1 130 61.5
Carub.0005s2754 Capsella rubella HOM05D004895 ORTHO05D003385 8.1e-30 135.2 285 35.8
AL2G33910 Arabidopsis lyrata HOM05D004895 ORTHO05D003385 1.1e-29 134.8 275 32.4
A04p01440 Brassica napus HOM05D004895 ORTHO05D003385 1.7e-27 127.5 179 48.0
BraA05t21951Z Brassica rapa HOM05D004895 ORTHO05D003385 9.2e-26 121.7 326 29.8
AT3G60790 Arabidopsis thaliana HOM05D004895 ORTHO05D003385 1.6e-25 120.9 280 33.6
AL5G43100 Arabidopsis lyrata HOM05D004895 ORTHO05D003385 6.0e-25 119.0 281 33.5
AL2G40610 Arabidopsis lyrata HOM05D004895 ORTHO05D003385 1.5e-23 114.4 278 30.9
C03p36840 Brassica napus HOM05D004895 ORTHO05D003385 2.5e-23 113.6 301 28.9
BolC3t15995H Brassica oleracea HOM05D004895 ORTHO05D003385 4.3e-23 112.8 301 29.2
C06p52410 Brassica napus HOM05D004895 ORTHO05D003385 7.3e-23 112.1 293 30.4
BolC6t40260H Brassica oleracea HOM05D004895 ORTHO05D003385 7.3e-23 112.1 293 30.4
CARHR073530 Cardamine hirsuta HOM05D004895 ORTHO05D003385 7.3e-23 112.1 289 30.1
BcaC08g47420 Brassica carinata HOM05D004895 ORTHO05D003385 9.6e-23 111.7 293 30.4
BolC9t57864H Brassica oleracea HOM05D004895 ORTHO05D003385 1.2e-22 111.3 277 29.6
Thhalv10019621m.g Eutrema salsugineum HOM05D004895 ORTHO05D003385 2.1e-22 110.5 291 31.3
BcaC01g06685 Brassica carinata HOM05D004895 ORTHO05D003385 3.6e-22 109.8 293 29.4
AT1G80960 Arabidopsis thaliana HOM05D004895 ORTHO05D003385 4.7e-22 109.4 281 30.6
Carub.0003s3337 Capsella rubella HOM05D004895 ORTHO05D003385 6.2e-22 109.0 276 29.7
Sp5g33570 Schrenkiella parvula HOM05D004895 ORTHO05D003385 8.1e-22 108.6 245 33.1
AL7G40710 Arabidopsis lyrata HOM05D004895 ORTHO05D003385 1.8e-21 107.5 199 36.7
BcaB03g16024 Brassica carinata HOM05D004895 ORTHO05D003385 4.0e-21 106.3 194 37.6
Thhalv10009850m.g Eutrema salsugineum HOM05D004895 ORTHO05D003385 6.9e-21 105.5 284 30.3
A07p43760 Brassica napus HOM05D004895 ORTHO05D003385 1.2e-20 104.8 296 28.7
BraA07t31885Z Brassica rapa HOM05D004895 ORTHO05D003385 1.2e-20 104.8 296 28.7
C09p50110 Brassica napus HOM05D004895 ORTHO05D003385 2.0e-20 104.0 196 35.2
Thhalv10002356m.g Eutrema salsugineum HOM05D004895 ORTHO05D003385 2.6e-20 103.6 301 28.2
Carub.0007s2703 Capsella rubella HOM05D004895 ORTHO05D003385 7.6e-20 102.1 198 34.8
AL7G40680 Arabidopsis lyrata HOM05D004895 ORTHO05D003385 9.9e-20 101.7 199 35.7
Carub.0002s1368 Capsella rubella HOM05D004895 ORTHO05D003385 9.9e-20 101.7 289 28.4
CARHR073430 Cardamine hirsuta HOM05D004895 ORTHO05D003385 9.9e-20 101.7 283 28.6
Carub.0001s3755 Capsella rubella HOM05D004895 ORTHO05D003385 1.3e-19 101.3 336 27.1
Sp7g13290 Schrenkiella parvula HOM05D004895 ORTHO05D003385 1.3e-19 101.3 201 34.3
BcaB02g06905 Brassica carinata HOM05D004895 ORTHO05D003385 2.2e-19 100.5 290 27.9
Thhalv10022453m.g Eutrema salsugineum HOM05D004895 ORTHO05D003385 2.9e-19 100.1 233 32.6
Thhalv10027373m.g Eutrema salsugineum HOM05D004895 ORTHO05D003385 2.9e-19 100.1 233 32.6
Sp4g04880 Schrenkiella parvula HOM05D004895 ORTHO05D003385 4.9e-19 99.4 283 29.7
AL2G38840 Arabidopsis lyrata HOM05D004895 ORTHO05D003385 6.4e-19 99.0 250 28.8
BcaB05g25141 Brassica carinata HOM05D004895 ORTHO05D003385 8.4e-19 98.6 294 27.2
Thhalv10027314m.g Eutrema salsugineum HOM05D004895 ORTHO05D003385 8.4e-19 98.6 229 31.4
Thhalv10027541m.g Eutrema salsugineum HOM05D004895 ORTHO05D003385 8.4e-19 98.6 233 32.2
AT1G67390 Arabidopsis thaliana HOM05D004895 ORTHO05D003385 7.1e-18 95.5 339 25.7
BcaB02g06904 Brassica carinata HOM05D004895 ORTHO05D003385 2.7e-17 93.6 204 31.9
AT1G78470 Arabidopsis thaliana HOM05D004895 ORTHO05D003385 3.5e-17 93.2 248 29.4
A10p03240 Brassica napus HOM05D004895 ORTHO05D003385 3.5e-17 93.2 202 30.2
BraA10t42600Z Brassica rapa HOM05D004895 ORTHO05D003385 1.0e-16 91.7 202 30.7
BcaB02g07241 Brassica carinata HOM05D004895 ORTHO05D003385 3.9e-16 89.7 301 27.9
BcaC02g10178 Brassica carinata HOM05D004895 ORTHO05D003385 3.9e-16 89.7 106 50.9
BolC4t24744H Brassica oleracea HOM05D004895 ORTHO05D003385 3.9e-16 89.7 104 51.0
C05p05220 Brassica napus HOM05D004895 ORTHO05D003385 1.1e-15 88.2 282 28.4
BolC2t09576H Brassica oleracea HOM05D004895 ORTHO05D003385 1.9e-15 87.4 295 26.8
BraA10t42831Z Brassica rapa HOM05D004895 ORTHO05D003385 1.9e-15 87.4 281 26.7
AL2G25930 Arabidopsis lyrata HOM05D004895 ORTHO05D003385 2.5e-15 87.0 252 26.6
BcaC05g24680 Brassica carinata HOM05D004895 ORTHO05D003385 2.5e-15 87.0 282 28.0
Thhalv10022454m.g Eutrema salsugineum HOM05D004895 ORTHO05D003385 2.5e-15 87.0 285 27.0
A02p22200 Brassica napus HOM05D004895 ORTHO05D003385 4.3e-15 86.3 329 25.5
BraA02t07225Z Brassica rapa HOM05D004895 ORTHO05D003385 4.3e-15 86.3 329 25.5
Carub.0006s3727 Capsella rubella HOM05D004895 ORTHO05D003385 4.3e-15 86.3 178 34.3
Thhalv10026901m.g Eutrema salsugineum HOM05D004895 ORTHO05D003385 5.6e-15 85.9 198 32.8
A10p05670 Brassica napus HOM05D004895 ORTHO05D003385 9.6e-15 85.1 282 28.0
BraA10t42828Z Brassica rapa HOM05D004895 ORTHO05D003385 9.6e-15 85.1 282 28.0
Thhalv10027212m.g Eutrema salsugineum HOM05D004895 ORTHO05D003385 9.6e-15 85.1 198 32.8
AL2G25940 Arabidopsis lyrata HOM05D004895 ORTHO05D003385 1.3e-14 84.7 285 27.0
BcaC03g15815 Brassica carinata HOM05D004895 ORTHO05D003385 2.1e-14 84.0 329 25.2
Thhalv10027448m.g Eutrema salsugineum HOM05D004895 ORTHO05D003385 3.6e-14 83.2 198 32.3
BcaC04g19895 Brassica carinata HOM05D004895 ORTHO05D003385 4.8e-14 82.8 127 39.4
Sp2g01400 Schrenkiella parvula HOM05D004895 ORTHO05D003385 1.1e-13 81.6 282 27.0
BcaB02g06751 Brassica carinata HOM05D004895 ORTHO05D003385 2.4e-13 80.5 199 32.2
Carub.0002s1372 Capsella rubella HOM05D004895 ORTHO05D003385 1.3e-11 74.7 280 27.9
BcaB03g16021 Brassica carinata HOM05D004895 ORTHO05D003385 2.9e-11 73.6 194 32.0
Carub.0002s1371 Capsella rubella HOM05D004895 ORTHO05D003385 6.4e-11 72.4 323 24.8
BcaB01g01480 Brassica carinata HOM05D004895 ORTHO05D003385 4.2e-10 69.7 36 88.9
A10p05690 Brassica napus HOM05D004895 ORTHO05D003385 5.4e-10 69.3 281 24.2
BolC5t29293H Brassica oleracea HOM05D004895 ORTHO05D003385 7.1e-10 68.9 195 31.8
Sp1g05910 Schrenkiella parvula HOM05D004895 ORTHO05D003385 1.6e-09 67.8 211 27.0
Carub.0002s1369 Capsella rubella HOM05D004895 ORTHO05D003385 3.9e-08 63.2 245 28.6
A09p53040 Brassica napus HOM05D004895 ORTHO05D003385 6.7e-08 62.4 46 71.7
THA.LOC104812295 Tarenaya hassleriana HOM05D004895 ORTHO05D003385 3.7e-06 56.6 261 26.1
A05p31100 Brassica napus HOM05D004895 ORTHO05D003385 6.2e-06 55.8 232 28.4


User provided reference genes

Program Settings