Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g23389 Brassica carinata HOM05D005548 ORTHO05D007497 4.1e-265 917.5 470 100.0
BcaC03g13685 Brassica carinata HOM05D005548 ORTHO05D007497 8.5e-247 856.7 470 93.8
BNapus_Darmor_BZH_scaffold_38p02320 Brassica napus HOM05D005548 ORTHO05D007497 8.5e-247 856.7 470 93.8
BolC2t06964H Brassica oleracea HOM05D005548 ORTHO05D007497 3.2e-246 854.7 470 93.6
A02p05630 Brassica napus HOM05D005548 ORTHO05D007497 6.1e-245 850.5 470 93.0
BraA02t05515Z Brassica rapa HOM05D005548 ORTHO05D007497 6.1e-245 850.5 470 93.0
Thhalv10013469m.g Eutrema salsugineum HOM05D005548 ORTHO05D007497 6.1e-237 823.9 468 88.7
Sp6g24840 Schrenkiella parvula HOM05D005548 ORTHO05D007497 5.7e-235 817.4 472 89.8
CARHR193360 Cardamine hirsuta HOM05D005548 ORTHO05D007497 3.3e-222 775.0 471 85.8
Carub.0006s1789 Capsella rubella HOM05D005548 ORTHO05D007497 3.7e-218 761.5 466 85.0
AT5G19540 Arabidopsis thaliana HOM05D005548 ORTHO05D007497 6.4e-218 760.8 468 84.4
AL6G31050 Arabidopsis lyrata HOM05D005548 ORTHO05D007497 5.0e-215 751.1 466 84.3
Aa31LG4G18070 Aethionema arabicum HOM05D005548 ORTHO05D007497 7.1e-201 704.1 469 76.1
THA.LOC104811114 Tarenaya hassleriana HOM05D005548 ORTHO05D007497 1.1e-180 637.1 468 69.4
Manes.03G021300 Manihot esculenta HOM05D005548 ORTHO05D007497 1.6e-168 596.7 481 64.4
GSVIVG01015386001 Vitis vinifera HOM05D005548 ORTHO05D007497 7.9e-168 594.3 431 68.0
Thecc.09G109700 Theobroma cacao HOM05D005548 ORTHO05D007497 1.1e-166 590.5 471 64.3
PGR142G0895 Punica granatum HOM05D005548 ORTHO05D007497 1.5e-166 590.1 430 68.4
Eucgr.C01037 Eucalyptus grandis HOM05D005548 ORTHO05D007497 2.5e-166 589.3 475 63.4
Actinidia09420 Actinidia chinensis HOM05D005548 ORTHO05D007497 7.4e-166 587.8 425 68.2
Haze_25723 Corylus avellana HOM05D005548 ORTHO05D007497 7.4e-166 587.8 410 71.7
Haze_25730 Corylus avellana HOM05D005548 ORTHO05D007497 2.8e-165 585.9 410 71.5
Cfa021563 Carpinus fangiana HOM05D005548 ORTHO05D007497 1.4e-164 583.6 472 65.0
Glyma.07G085900 Glycine max HOM05D005548 ORTHO05D007497 1.8e-164 583.2 433 67.2
ClCG00G004520 Citrullus lanatus HOM05D005548 ORTHO05D007497 2.4e-164 582.8 412 69.7
Glyma.09G191000 Glycine max HOM05D005548 ORTHO05D007497 3.1e-164 582.4 412 69.7
Cpa.g.sc23.102 Carica papaya HOM05D005548 ORTHO05D007497 9.0e-164 580.9 432 67.4
VMungo0464G1126 Vigna mungo HOM05D005548 ORTHO05D007497 1.2e-163 580.5 436 66.7
TAR383G0243 Trochodendron aralioides HOM05D005548 ORTHO05D007497 1.5e-163 580.1 437 68.0
Gohir.D07G005900 Gossypium hirsutum HOM05D005548 ORTHO05D007497 4.5e-163 578.6 390 72.6
Gohir.A07G006100 Gossypium hirsutum HOM05D005548 ORTHO05D007497 5.8e-163 578.2 390 72.3
Potri.018G080900 Populus trichocarpa HOM05D005548 ORTHO05D007497 5.8e-163 578.2 413 69.5
CiPaw.04G163600 Carya illinoinensis HOM05D005548 ORTHO05D007497 7.6e-163 577.8 410 71.0
MELO3C025346.2 Cucumis melo HOM05D005548 ORTHO05D007497 7.6e-163 577.8 408 69.4
Duzib168G0181 Durio zibethinus HOM05D005548 ORTHO05D007497 7.6e-163 577.8 471 63.3
QL02p085206 Quercus lobata HOM05D005548 ORTHO05D007497 1.0e-162 577.4 411 70.1
CSS0001162 Camellia sinensis var. sinensis HOM05D005548 ORTHO05D007497 1.3e-162 577.0 392 71.9
CSS0009071 Camellia sinensis var. sinensis HOM05D005548 ORTHO05D007497 1.3e-162 577.0 392 71.9
Gorai.001G005500 Gossypium raimondii HOM05D005548 ORTHO05D007497 1.7e-162 576.6 390 72.1
Hma1.2p1_0518F.1_g171060 Hydrangea macrophylla HOM05D005548 ORTHO05D007497 2.9e-162 575.9 409 69.4
Dinv36636 Davidia involucrata HOM05D005548 ORTHO05D007497 4.9e-162 575.1 470 61.7
EL10Ac8g18489 Beta vulgaris HOM05D005548 ORTHO05D007497 1.1e-161 573.9 458 64.6
PGSC0003DMG400000312 Solanum tuberosum HOM05D005548 ORTHO05D007497 1.1e-161 573.9 415 68.2
Lj2g0015861 Lotus japonicus HOM05D005548 ORTHO05D007497 1.4e-161 573.5 410 68.3
Sopen12g003070 Solanum pennellii HOM05D005548 ORTHO05D007497 1.4e-161 573.5 415 67.7
Sed0013441 Sechium edule HOM05D005548 ORTHO05D007497 1.9e-161 573.2 402 69.7
Nitab4.5_0005947g0010 Nicotiana tabacum HOM05D005548 ORTHO05D007497 2.5e-161 572.8 417 68.3
Dinv41607 Davidia involucrata HOM05D005548 ORTHO05D007497 3.2e-161 572.4 475 62.9
Solyc12g007090.2 Solanum lycopersicum HOM05D005548 ORTHO05D007497 3.2e-161 572.4 415 67.7
Lalb_Chr14g0371531 Lupinus albus HOM05D005548 ORTHO05D007497 1.6e-160 570.1 401 69.6
MBI04_g22012_MAGBIO Magnolia biondii HOM05D005548 ORTHO05D007497 3.5e-160 568.9 468 63.2
CAN.G1529.9 Capsicum annuum HOM05D005548 ORTHO05D007497 4.6e-160 568.5 417 67.4
Hund26198 Selenicereus undatus HOM05D005548 ORTHO05D007497 4.6e-160 568.5 469 62.7
Cc06_g09710 Coffea canephora HOM05D005548 ORTHO05D007497 7.9e-160 567.8 435 66.0
CsaV3_1G024240 Cucumis sativus L. HOM05D005548 ORTHO05D007497 7.9e-160 567.8 436 65.8
Sc18g0001240 Simmondsia chinensis HOM05D005548 ORTHO05D007497 7.9e-160 567.8 440 63.9
arahy.Tifrunner.gnm1.ann1.HQIA7A Arachis hypogaea HOM05D005548 ORTHO05D007497 1.0e-159 567.4 454 64.1
Phvul.004G163700 Phaseolus vulgaris HOM05D005548 ORTHO05D007497 1.0e-159 567.4 436 65.6
Lj7C651T8 Lonicera japonica HOM05D005548 ORTHO05D007497 1.8e-159 566.6 393 69.7
Atru.chr7.1357 Acer truncatum HOM05D005548 ORTHO05D007497 3.0e-159 565.8 385 72.7
DCAR_010452 Daucus carota HOM05D005548 ORTHO05D007497 3.0e-159 565.8 439 64.7
TWI63G0439 Tripterygium wilfordii HOM05D005548 ORTHO05D007497 3.0e-159 565.8 402 69.7
COL.COLO4_34874 Corchorus olitorius HOM05D005548 ORTHO05D007497 5.1e-159 565.1 378 72.5
Lalb_Chr22g0352791 Lupinus albus HOM05D005548 ORTHO05D007497 8.7e-159 564.3 395 70.4
Sabra18G0068100 Salix brachista HOM05D005548 ORTHO05D007497 1.1e-158 563.9 465 63.2
Nn2g11732 Nelumbo nucifera HOM05D005548 ORTHO05D007497 3.3e-158 562.4 468 61.3
Actinidia20374 Actinidia chinensis HOM05D005548 ORTHO05D007497 4.3e-158 562.0 378 71.2
Aqoxy7G01651 Aquilegia oxysepala HOM05D005548 ORTHO05D007497 1.3e-157 560.5 436 64.2
MD02G1046200 Malus domestica HOM05D005548 ORTHO05D007497 8.2e-157 557.8 469 61.4
Lsat_1_v5_gn_8_95001 Lactuca sativa HOM05D005548 ORTHO05D007497 4.1e-156 555.4 401 68.3
HanXRQChr06g0179971 Helianthus annuus HOM05D005548 ORTHO05D007497 9.0e-156 554.3 393 69.7
Migut.K00455 Erythranthe guttata HOM05D005548 ORTHO05D007497 1.2e-155 553.9 409 67.5
FAN19G0123 Fragaria x ananassa HOM05D005548 ORTHO05D007497 1.2e-155 553.9 461 62.0
FvH4_1g04721 Fragaria vesca HOM05D005548 ORTHO05D007497 2.6e-155 552.7 461 62.0
Peaxi162Scf00546g00024 Petunia axillaris HOM05D005548 ORTHO05D007497 2.6e-155 552.7 418 66.0
Prupe.7G231800 Prunus persica HOM05D005548 ORTHO05D007497 2.6e-155 552.7 468 62.2
PSO832G1226 Papaver somniferum HOM05D005548 ORTHO05D007497 5.9e-155 551.6 399 67.9
ECA233G4048 Erigeron canadensis HOM05D005548 ORTHO05D007497 2.2e-154 549.7 383 70.0
PSO782G1908 Papaver somniferum HOM05D005548 ORTHO05D007497 3.8e-154 548.9 399 67.9
AUR62010987 Chenopodium quinoa HOM05D005548 ORTHO05D007497 5.0e-154 548.5 378 70.6
Ca_03976_v3 Cicer arietinum L. HOM05D005548 ORTHO05D007497 9.4e-153 544.3 395 68.4
RcHm_v2.0_Chr2g0090331 Rosa chinensis HOM05D005548 ORTHO05D007497 2.7e-152 542.7 403 67.0
FAN23G0305 Fragaria x ananassa HOM05D005548 ORTHO05D007497 1.4e-151 540.4 412 66.5
FAN26G0240 Fragaria x ananassa HOM05D005548 ORTHO05D007497 2.3e-151 539.7 412 66.5
TPR.G18453 Trifolium pratense HOM05D005548 ORTHO05D007497 2.3e-151 539.7 407 67.3
MSTRG.26421 Avicennia marina HOM05D005548 ORTHO05D007497 5.1e-151 538.5 414 65.0
SGA_v2.0_scaffold307G48040 Striga asiatica HOM05D005548 ORTHO05D007497 5.1e-151 538.5 432 63.9
ATR0315G003 Amborella trichopoda HOM05D005548 ORTHO05D007497 1.5e-150 537.0 391 68.3
SalBow1G6148 Salvia bowleyana HOM05D005548 ORTHO05D007497 5.7e-150 535.0 414 65.0
CDE02G3701 Ceratophyllum demersum HOM05D005548 ORTHO05D007497 2.8e-149 532.7 469 60.3
Nitab4.5_0002904g0080 Nicotiana tabacum HOM05D005548 ORTHO05D007497 8.2e-149 531.2 416 65.1
Psat1g042920 Pisum sativum HOM05D005548 ORTHO05D007497 1.1e-148 530.8 457 60.0
Medtr6g088460 Medicago truncatula HOM05D005548 ORTHO05D007497 1.8e-148 530.0 395 66.6
unitig_899.g15439 Utricularia gibba HOM05D005548 ORTHO05D007497 4.2e-145 518.8 391 66.0
MD15G1184300 Malus domestica HOM05D005548 ORTHO05D007497 3.0e-143 512.7 467 57.8
Duzib150G0071 Durio zibethinus HOM05D005548 ORTHO05D007497 1.5e-139 500.4 463 59.2
Os08g0387500 Oryza sativa ssp. japonica HOM05D005548 ORTHO05D007497 5.0e-138 495.4 389 62.5
Zm00001eb042080 Zea mays HOM05D005548 ORTHO05D007497 1.5e-134 483.8 385 62.1
vmacro20704 Vaccinium macrocarpon HOM05D005548 ORTHO05D007497 6.3e-133 478.4 390 60.3
FAN28G1005 Fragaria x ananassa HOM05D005548 ORTHO05D007497 4.0e-127 459.1 337 69.4
SalBow1G2309 Salvia bowleyana HOM05D005548 ORTHO05D007497 5.2e-127 458.8 346 66.2
Hma1.2p1_0518F.1_g171070 Hydrangea macrophylla HOM05D005548 ORTHO05D007497 6.7e-127 458.4 316 70.3
Rhsim01G0095300 Rhododendron simsii HOM05D005548 ORTHO05D007497 5.3e-124 448.7 419 52.7
HPP92_019989 Vanilla planifolia HOM05D005548 ORTHO05D004628 3.1e-108 396.4 371 55.5
Mapoly0115s0052 Marchantia polymorpha HOM05D005548 ORTHO05D007497 2.8e-104 383.3 391 51.9
Pp3c17_15530 Physcomitrium patens HOM05D005548 ORTHO05D007497 5.2e-103 379.0 382 52.4
Pp3c17_15540 Physcomitrium patens HOM05D005548 ORTHO05D007497 1.9e-100 370.5 371 52.3
AUR62021496 Chenopodium quinoa HOM05D005548 ORTHO05D007497 1.3e-98 364.4 260 68.5
AagrBONN_evm.TU.Sc2ySwM_344.3922 Anthoceros agrestis HOM05D005548 ORTHO05D007497 3.3e-97 359.8 414 46.6
SMO367G0640 Selaginella moellendorffii HOM05D005548 ORTHO05D007497 2.0e-94 350.5 387 49.9
SEGI_13755 Sequoiadendron giganteum HOM05D005548 ORTHO05D007497 3.2e-92 343.2 378 46.6
CBR_g3024 Chara braunii HOM05D005548 ORTHO05D007497 8.1e-80 302.0 390 46.7
SEGI_11261 Sequoiadendron giganteum HOM05D005548 ORTHO05D007497 1.8e-79 300.8 323 46.7
Rhsim01G0096400 Rhododendron simsii HOM05D005548 ORTHO05D007497 1.3e-66 258.1 339 40.4
AUR62021498 Chenopodium quinoa HOM05D005548 ORTHO05D007497 2.5e-49 200.7 137 70.1
Ciclev10010350m.g Citrus clementina HOM05D005548 ORTHO05D007497 6.9e-39 166.0 254 40.6
Nn8g39172 Nelumbo nucifera HOM05D005548 ORTHO05D007497 4.5e-38 163.3 113 69.9
Oeu048670.1 Olea europaea HOM05D005548 ORTHO05D007497 3.9e-34 150.2 100 68.0
CSS0042262 Camellia sinensis var. sinensis HOM05D003621 ORTHO05D004259 2.3e-26 124.4 84 70.2
CSS0016063 Camellia sinensis var. sinensis HOM05D003621 ORTHO05D004259 6.7e-26 122.9 84 70.2
SEGI_35049 Sequoiadendron giganteum HOM05D005548 ORTHO05D007497 6.7e-26 122.9 259 34.4
SEGI_23308 Sequoiadendron giganteum HOM05D005548 ORTHO05D007497 2.6e-25 120.9 317 31.9
CSS0021555 Camellia sinensis var. sinensis HOM05D005548 ORTHO05D007497 1.2e-22 112.1 72 75.0
Ah.12g056490 Amaranthus hybridus HOM05D005548 ORTHO05D007497 1.3e-21 108.6 83 66.3
MCO02G293 Micromonas commoda HOM05D005548 ORTHO05D007497 2.9e-21 107.5 352 27.6
Dinv06981 Davidia involucrata HOM05D005548 ORTHO05D045157 3.8e-21 107.1 111 54.1
arahy.Tifrunner.gnm1.ann1.VN1956 Arachis hypogaea HOM05D005548 ORTHO05D007497 9.7e-17 92.4 121 48.8
CSS0011769 Camellia sinensis var. sinensis HOM05D005548 ORTHO05D007497 1.4e-15 88.6 69 65.2
CSS0008633 Camellia sinensis var. sinensis HOM05D005548 ORTHO05D007497 6.5e-13 79.7 72 58.3
SalBow1G1492 Salvia bowleyana HOM05D005548 ORTHO05D007497 8.0e-11 72.8 53 62.3
CSS0008802 Camellia sinensis var. sinensis HOM05D005548 ORTHO05D007497 3.0e-10 70.9 60 58.3


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