Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g23376 Brassica carinata HOM05D000043 ORTHO05D091818 2.5e-43 178.3 86 100.0
Sp6g25200 Schrenkiella parvula HOM05D000043 ORTHO05D001371 2.0e-08 62.4 35 80.0
BcaB08g36597 Brassica carinata HOM05D000043 ORTHO05D001371 1.3e-07 59.7 36 69.4
Aa31LG11G10470 Aethionema arabicum HOM05D000043 ORTHO05D001371 3.7e-07 58.2 36 69.4
Thhalv10013457m.g Eutrema salsugineum HOM05D000043 ORTHO05D001371 4.9e-07 57.8 36 69.4
BcaC04g18591 Brassica carinata HOM05D000043 ORTHO05D001371 8.3e-07 57.0 36 66.7
A10p20460 Brassica napus HOM05D000043 ORTHO05D001371 8.3e-07 57.0 36 66.7
C09p57090 Brassica napus HOM05D000043 ORTHO05D001371 8.3e-07 57.0 36 66.7
BolC9t58574H Brassica oleracea HOM05D000043 ORTHO05D001371 8.3e-07 57.0 36 66.7
BraA10t44116Z Brassica rapa HOM05D000043 ORTHO05D001371 8.3e-07 57.0 36 66.7
MSTRG.4002 Avicennia marina HOM05D000043 ORTHO05D001371 1.1e-06 56.6 55 54.5
CARHR193780 Cardamine hirsuta HOM05D000043 ORTHO05D001371 2.4e-06 55.5 36 69.4
AL6G30590 Arabidopsis lyrata HOM05D000043 ORTHO05D001371 3.1e-06 55.1 36 63.9
Carub.0006s1750 Capsella rubella HOM05D000043 ORTHO05D001371 3.1e-06 55.1 36 63.9
AT5G19160 Arabidopsis thaliana HOM05D000043 ORTHO05D001371 5.4e-06 54.3 36 63.9
Manes.03G182900 Manihot esculenta HOM05D000043 ORTHO05D001371 7.0e-06 53.9 55 50.9
Oeu030321.1 Olea europaea HOM05D000043 ORTHO05D001371 7.0e-06 53.9 41 61.0
Oeu029217.1 Olea europaea HOM05D000043 ORTHO05D001371 9.2e-06 53.5 41 61.0
Solyc01g079850.3 Solanum lycopersicum HOM05D000043 ORTHO05D001371 9.2e-06 53.5 55 52.7
Sopen01g031600 Solanum pennellii HOM05D000043 ORTHO05D001371 9.2e-06 53.5 55 52.7


User provided reference genes

Program Settings