Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g23366 Brassica carinata HOM05D009117 ORTHO05D012204 2.6e-141 505.4 258 100.0
BcaB05g23704 Brassica carinata HOM05D009117 ORTHO05D012204 1.6e-106 389.8 229 86.5
A09p37280 Brassica napus HOM05D009117 ORTHO05D012204 3.2e-54 216.1 116 90.5
A03p68140 Brassica napus HOM05D009117 ORTHO05D012204 7.1e-54 214.9 116 91.4
C02p27840 Brassica napus HOM05D009117 ORTHO05D012204 7.1e-54 214.9 116 91.4
C02p28440 Brassica napus HOM05D009117 ORTHO05D012204 1.6e-53 213.8 116 91.4
BolC2t08887H Brassica oleracea HOM05D009117 ORTHO05D012204 1.6e-53 213.8 116 91.4
BraA01t02653Z Brassica rapa HOM05D009117 ORTHO05D012204 1.6e-53 213.8 116 90.5
C07p19280 Brassica napus HOM05D009117 ORTHO05D012204 2.1e-53 213.4 116 90.5
A02p20020 Brassica napus HOM05D009117 ORTHO05D012204 4.6e-53 212.2 106 95.3
A09p17260 Brassica napus HOM05D009117 ORTHO05D012204 4.6e-53 212.2 106 95.3
BolC1t02526H Brassica oleracea HOM05D009117 ORTHO05D012204 1.9e-51 206.8 116 89.7
A07p43380 Brassica napus HOM05D009117 ORTHO05D024074 9.6e-51 204.5 245 48.2
C01p25760 Brassica napus HOM05D009117 ORTHO05D012204 2.8e-50 203.0 116 87.9
BolC3t21359H Brassica oleracea HOM05D009117 ORTHO05D012204 8.2e-50 201.4 116 86.2
BolC7t41869H Brassica oleracea HOM05D009117 ORTHO05D012204 1.2e-48 197.6 116 85.3
BcaC08g43055 Brassica carinata HOM05D009117 ORTHO05D024074 1.2e-37 161.0 234 41.0
C03p10840 Brassica napus HOM05D009590 ORTHO05D100504 8.8e-28 128.3 231 39.0
C01p30030 Brassica napus HOM05D009590 ORTHO05D042627 3.3e-27 126.3 239 36.4
BolC1t02943H Brassica oleracea HOM05D009590 ORTHO05D042627 3.3e-27 126.3 239 36.4
BcaNung03499 Brassica carinata HOM05D009590 ORTHO05D020087 2.8e-26 123.2 234 37.2
A10p33160 Brassica napus HOM05D009117 ORTHO05D012204 2.4e-25 120.2 60 95.0
BcaB07g32585 Brassica carinata HOM05D009590 ORTHO05D014118 1.9e-22 110.5 149 42.3
BcaC06g36732 Brassica carinata HOM05D009590 ORTHO05D014118 4.4e-19 99.4 138 39.9
C04p26320 Brassica napus HOM05D009590 ORTHO05D042950 1.7e-18 97.4 142 37.3
BolC4t24175H Brassica oleracea HOM05D009590 ORTHO05D042950 1.7e-18 97.4 142 37.3
BcaC02g10657 Brassica carinata HOM05D009590 ORTHO05D014118 2.8e-18 96.7 167 34.7
C04p12300 Brassica napus HOM05D009590 ORTHO05D014118 4.8e-18 95.9 171 34.5
BcaB08g35443 Brassica carinata HOM05D009117 ORTHO05D024074 1.1e-17 94.7 168 38.1
BolC1t03303H Brassica oleracea HOM05D009590 ORTHO05D014118 1.4e-17 94.4 226 31.4
BraA01t02898Z Brassica rapa HOM05D009590 ORTHO05D014118 4.1e-17 92.8 115 39.1
BolC2t07403H Brassica oleracea HOM05D009590 ORTHO05D014118 4.5e-16 89.4 139 41.0
BcaC04g20540 Brassica carinata HOM05D009590 ORTHO05D014118 6.1e-13 79.0 90 38.9
Sp6g09970 Schrenkiella parvula HOM05D009590 ORTHO05D014118 8.0e-13 78.6 130 37.7
BolC4t22877H Brassica oleracea HOM05D009590 ORTHO05D014118 4.0e-12 76.3 152 31.6
BolC2t08829H Brassica oleracea HOM05D009117 ORTHO05D012204 6.8e-12 75.5 41 87.8
A10p10590 Brassica napus HOM05D009117 ORTHO05D024074 1.5e-11 74.3 153 37.3
Sp5g15830 Schrenkiella parvula HOM05D001959 ORTHO05D001955 8.3e-10 68.6 117 36.8
A01p27590 Brassica napus HOM05D009590 ORTHO05D014118 5.4e-09 65.9 77 40.3
C09p34070 Brassica napus HOM05D009590 ORTHO05D020087 1.7e-07 60.8 87 41.4
BolC9t56243H Brassica oleracea HOM05D009590 ORTHO05D020087 1.7e-07 60.8 87 41.4
Sp6g09770 Schrenkiella parvula HOM05D007915 ORTHO05D010216 1.5e-06 57.8 129 27.1
AL1G51920 Arabidopsis lyrata HOM05D024522 ORTHO05D023612 3.2e-06 56.6 114 29.8


User provided reference genes

Program Settings