Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g23347 Brassica carinata HOM05D015408 ORTHO05D013236 2.6e-50 201.8 107 100.0
BcaB06g28115 Brassica carinata HOM05D015408 ORTHO05D013236 8.4e-33 143.7 105 79.0
BcaB03g11804 Brassica carinata HOM05D015408 ORTHO05D013236 6.9e-19 97.4 107 57.9
BcaC09g47789 Brassica carinata HOM05D015408 ORTHO05D013236 4.2e-16 88.2 107 56.1
BolC2t07846H Brassica oleracea HOM05D015408 ORTHO05D013236 1.8e-14 82.8 48 83.3
BolC7t45345H Brassica oleracea HOM05D000589 ORTHO05D000401 6.7e-14 80.9 48 81.2
BraA09t39931Z Brassica rapa HOM05D015408 ORTHO05D013236 2.1e-12 75.9 102 48.0
BcaC03g17138 Brassica carinata HOM05D015408 ORTHO05D013236 6.0e-07 57.8 102 44.1
BolC3t19562H Brassica oleracea HOM05D000589 ORTHO05D001885 6.0e-07 57.8 50 60.0
BolC5t33321H Brassica oleracea HOM05D015408 ORTHO05D013236 1.0e-06 57.0 51 60.8
BolC3t19614H Brassica oleracea HOM05D000589 ORTHO05D000401 1.8e-06 56.2 51 58.8
BolC8t49094H Brassica oleracea HOM05D000589 ORTHO05D000401 2.3e-06 55.8 96 40.6
BcaB06g25928 Brassica carinata HOM05D000589 ORTHO05D013236 3.0e-06 55.5 50 56.0
BcaC02g12409 Brassica carinata HOM05D015408 ORTHO05D013236 3.0e-06 55.5 50 62.0
BolC1t02283H Brassica oleracea HOM05D000589 ORTHO05D000401 3.0e-06 55.5 50 58.0
BcaB01g03889 Brassica carinata HOM05D000589 ORTHO05D013236 3.9e-06 55.1 49 63.3
BolC2t08087H Brassica oleracea HOM05D000589 ORTHO05D000401 3.9e-06 55.1 49 63.3
BolC3t14691H Brassica oleracea HOM05D000589 ORTHO05D000401 3.9e-06 55.1 49 63.3
BolC3t20860H Brassica oleracea HOM05D000214 ORTHO05D000131 5.1e-06 54.7 48 60.4
BolC7t43887H Brassica oleracea HOM05D000589 ORTHO05D000401 6.7e-06 54.3 50 58.0


User provided reference genes

Program Settings