Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g23333 Brassica carinata HOM05D005665 ORTHO05D039877 2.3e-31 138.3 69 100.0
Sp6g04030 Schrenkiella parvula HOM05D005665 ORTHO05D007230 6.0e-24 113.6 68 79.4
SpUn0051_0010 Schrenkiella parvula HOM05D005665 ORTHO05D007230 6.0e-24 113.6 68 79.4
Thhalv10028789m.g Eutrema salsugineum HOM05D005665 ORTHO05D007230 1.7e-23 112.1 68 77.9
A09p25970 Brassica napus HOM05D005665 ORTHO05D007230 2.3e-23 111.7 68 82.4
BraA09t38164Z Brassica rapa HOM05D005665 ORTHO05D007230 2.3e-23 111.7 68 82.4
BcaB01g01848 Brassica carinata HOM05D005665 ORTHO05D007230 8.6e-23 109.8 66 84.8
Carub.0006s3285 Capsella rubella HOM05D005665 ORTHO05D007230 8.6e-23 109.8 68 77.9
BcaC04g21346 Brassica carinata HOM05D005665 ORTHO05D007230 1.1e-22 109.4 68 80.9
C09p32940 Brassica napus HOM05D005665 ORTHO05D007230 1.1e-22 109.4 68 80.9
BolC9t56129H Brassica oleracea HOM05D005665 ORTHO05D007230 1.1e-22 109.4 68 80.9
THA.LOC104812890 Tarenaya hassleriana HOM05D005665 ORTHO05D007230 1.1e-22 109.4 68 75.0
FvH4_3g04930 Fragaria vesca HOM05D005665 ORTHO05D007230 2.5e-22 108.2 68 75.0
FAN11G2254 Fragaria x ananassa HOM05D005665 ORTHO05D007230 2.5e-22 108.2 68 75.0
FAN21G3875 Fragaria x ananassa HOM05D005665 ORTHO05D007230 2.5e-22 108.2 68 75.0
FAN25G3768 Fragaria x ananassa HOM05D005665 ORTHO05D007230 2.5e-22 108.2 68 75.0
THA.LOC104806290 Tarenaya hassleriana HOM05D005665 ORTHO05D007230 3.3e-22 107.8 68 75.0
Cpa.g.sc27.60 Carica papaya HOM05D005665 ORTHO05D007230 4.3e-22 107.5 68 73.5
Hma1.2p1_0126F.1_g059290 Hydrangea macrophylla HOM05D005665 ORTHO05D007230 7.3e-22 106.7 68 72.1
Duzib160G0567 Durio zibethinus HOM05D005665 ORTHO05D007230 9.6e-22 106.3 68 73.5
AT4G04930 Arabidopsis thaliana HOM05D005665 ORTHO05D007230 1.6e-21 105.5 68 76.5
MD10G1295900 Malus domestica HOM05D005665 ORTHO05D007230 1.6e-21 105.5 68 72.1
GSVIVG01002020001 Vitis vinifera HOM05D005665 ORTHO05D007230 1.6e-21 105.5 68 73.5
COL.COLO4_31496 Corchorus olitorius HOM05D005665 ORTHO05D007230 2.1e-21 105.1 68 70.6
FAN16G3723 Fragaria x ananassa HOM05D005665 ORTHO05D007230 2.1e-21 105.1 68 73.5
RcHm_v2.0_Chr5g0008091 Rosa chinensis HOM05D005665 ORTHO05D007230 2.1e-21 105.1 68 72.1
Prupe.4G044600 Prunus persica HOM05D005665 ORTHO05D007230 2.8e-21 104.8 68 72.1
CSS0000582 Camellia sinensis var. sinensis HOM05D005665 ORTHO05D007230 3.6e-21 104.4 68 72.1
Eucgr.E03124 Eucalyptus grandis HOM05D005665 ORTHO05D007230 3.6e-21 104.4 68 70.6
Eucgr.L02776 Eucalyptus grandis HOM05D005665 ORTHO05D007230 3.6e-21 104.4 68 70.6
Cc02_g13170 Coffea canephora HOM05D005665 ORTHO05D007230 4.7e-21 104.0 68 70.6
Gohir.A10G024500 Gossypium hirsutum HOM05D005665 ORTHO05D007230 4.7e-21 104.0 68 73.5
Gohir.D10G025200 Gossypium hirsutum HOM05D005665 ORTHO05D007230 4.7e-21 104.0 68 73.5
Gorai.011G026500 Gossypium raimondii HOM05D005665 ORTHO05D007230 4.7e-21 104.0 68 73.5
Duzib192G0757 Durio zibethinus HOM05D005665 ORTHO05D007230 6.2e-21 103.6 68 70.6
CiPaw.09G058000 Carya illinoinensis HOM05D005665 ORTHO05D007230 8.1e-21 103.2 68 72.1
Sc05g0007780 Simmondsia chinensis HOM05D005665 ORTHO05D007230 8.1e-21 103.2 68 70.6
TAR627G0371 Trochodendron aralioides HOM05D005665 ORTHO05D007230 1.1e-20 102.8 68 72.1
Actinidia01890 Actinidia chinensis HOM05D005665 ORTHO05D007230 1.4e-20 102.4 68 72.1
Lj2A287T49 Lonicera japonica HOM05D005665 ORTHO05D007230 1.4e-20 102.4 68 70.6
Peaxi162Scf00461g00010 Petunia axillaris HOM05D005665 ORTHO05D007230 1.4e-20 102.4 68 69.1
Actinidia05618 Actinidia chinensis HOM05D005665 ORTHO05D007230 1.8e-20 102.1 68 72.1
ClCG01G022870 Citrullus lanatus HOM05D005665 ORTHO05D007230 1.8e-20 102.1 68 73.5
Nitab4.5_0013250g0010 Nicotiana tabacum HOM05D005665 ORTHO05D007230 1.8e-20 102.1 68 70.6
Peaxi162Scf00530g00218 Petunia axillaris HOM05D005665 ORTHO05D007230 1.8e-20 102.1 68 70.6
Thecc.06G190100 Theobroma cacao HOM05D005665 ORTHO05D007230 1.8e-20 102.1 68 69.1
Aqoxy4G01024 Aquilegia oxysepala HOM05D005665 ORTHO05D007230 2.4e-20 101.7 68 72.1
EL10Ac8g20360 Beta vulgaris HOM05D005665 ORTHO05D007230 2.4e-20 101.7 66 72.7
CAN.G413.22 Capsicum annuum HOM05D005665 ORTHO05D007230 2.4e-20 101.7 63 76.2
Dinv07542 Davidia involucrata HOM05D005665 ORTHO05D007230 2.4e-20 101.7 68 69.1
Manes.16G026000 Manihot esculenta HOM05D005665 ORTHO05D007230 2.4e-20 101.7 68 72.1
Sabra11G0034800 Salix brachista HOM05D005665 ORTHO05D007230 2.4e-20 101.7 66 72.7
AUR62014800 Chenopodium quinoa HOM05D005665 ORTHO05D007230 3.1e-20 101.3 66 71.2
AUR62016991 Chenopodium quinoa HOM05D005665 ORTHO05D007230 3.1e-20 101.3 66 71.2
ClCG03G005940 Citrullus lanatus HOM05D005665 ORTHO05D007230 3.1e-20 101.3 66 74.2
PSO210G3809 Papaver somniferum HOM05D005665 ORTHO05D007230 3.1e-20 101.3 68 70.6
PSO832G3519 Papaver somniferum HOM05D005665 ORTHO05D007230 3.1e-20 101.3 68 70.6
TAR626G1890 Trochodendron aralioides HOM05D005665 ORTHO05D007230 3.1e-20 101.3 68 70.6
Glyma.15G072800 Glycine max HOM05D005665 ORTHO05D007230 4.0e-20 100.9 63 74.6
Gohir.A06G126400 Gossypium hirsutum HOM05D005665 ORTHO05D007230 4.0e-20 100.9 66 72.7
Nitab4.5_0004775g0030 Nicotiana tabacum HOM05D005665 ORTHO05D007230 4.0e-20 100.9 68 69.1
Nitab4.5_0005615g0050 Nicotiana tabacum HOM05D005665 ORTHO05D007230 4.0e-20 100.9 68 69.1
PGR042G0011 Punica granatum HOM05D005665 ORTHO05D007230 4.0e-20 100.9 68 69.1
MELO3C002591.2 Cucumis melo HOM05D005665 ORTHO05D007230 5.2e-20 100.5 66 72.7
Gohir.D06G131200 Gossypium hirsutum HOM05D005665 ORTHO05D007230 5.2e-20 100.5 66 72.7
Gorai.010G153100 Gossypium raimondii HOM05D005665 ORTHO05D007230 5.2e-20 100.5 66 72.7
Solyc10g009030.4 Solanum lycopersicum HOM05D005665 ORTHO05D007230 5.2e-20 100.5 68 70.6
PGSC0003DMG400022827 Solanum tuberosum HOM05D005665 ORTHO05D007230 5.2e-20 100.5 68 70.6
Atru.chr10.1913 Acer truncatum HOM05D005665 ORTHO05D007230 6.9e-20 100.1 68 69.1
Ciclev10015896m.g Citrus clementina HOM05D005665 ORTHO05D007230 6.9e-20 100.1 66 74.2
CsaV3_1G012180 Cucumis sativus L. HOM05D005665 ORTHO05D007230 6.9e-20 100.1 66 72.7
CiPaw.10G047200 Carya illinoinensis HOM05D005665 ORTHO05D007230 8.9e-20 99.8 68 70.6
Nitab4.5_0002158g0010 Nicotiana tabacum HOM05D005665 ORTHO05D007230 8.9e-20 99.8 63 74.6
Oeu053967.2 Olea europaea HOM05D005665 ORTHO05D007230 8.9e-20 99.8 68 67.6
Sopen10g004810 Solanum pennellii HOM05D005665 ORTHO05D007230 8.9e-20 99.8 68 70.6
SGA_v2.0_scaffold22G09724 Striga asiatica HOM05D005665 ORTHO05D007230 8.9e-20 99.8 68 70.6
CANSAT35G1141 Cannabis sativa HOM05D005665 ORTHO05D007230 1.2e-19 99.4 68 69.1
MBI18_g16999_MAGBIO Magnolia biondii HOM05D005665 ORTHO05D007230 1.2e-19 99.4 63 74.6
RhsimUnG0044900 Rhododendron simsii HOM05D005665 ORTHO05D007230 1.2e-19 99.4 66 74.2
Ca_00306_v3 Cicer arietinum L. HOM05D005665 ORTHO05D007230 1.5e-19 99.0 66 71.2
Lalb_Chr18g0059701 Lupinus albus HOM05D005665 ORTHO05D007230 1.5e-19 99.0 66 69.7
Nn1g04043 Nelumbo nucifera HOM05D005665 ORTHO05D007230 1.5e-19 99.0 66 71.2
Nitab4.5_0003942g0010 Nicotiana tabacum HOM05D005665 ORTHO05D007230 1.5e-19 99.0 68 69.1
DCAR_004082 Daucus carota HOM05D005665 ORTHO05D007230 2.6e-19 98.2 68 70.6
QL05p039803 Quercus lobata HOM05D005665 ORTHO05D007230 2.6e-19 98.2 66 71.2
CSS0037689 Camellia sinensis var. sinensis HOM05D005665 ORTHO05D007230 3.4e-19 97.8 68 67.6
Glyma.13G240700 Glycine max HOM05D005665 ORTHO05D007230 3.4e-19 97.8 63 73.0
Manes.17G043900 Manihot esculenta HOM05D005665 ORTHO05D007230 3.4e-19 97.8 68 70.6
ATR0680G322 Amborella trichopoda HOM05D005665 ORTHO05D007230 4.4e-19 97.4 66 71.2
Potri.011G050800 Populus trichocarpa HOM05D005665 ORTHO05D007230 4.4e-19 97.4 66 72.7
SalBow7G1156 Salvia bowleyana HOM05D005665 ORTHO05D007230 4.4e-19 97.4 68 66.2
MSTRG.7328 Avicennia marina HOM05D005665 ORTHO05D007230 5.8e-19 97.1 68 66.2
Cfa000422 Carpinus fangiana HOM05D005665 ORTHO05D007230 7.6e-19 96.7 68 69.1
Lsat_1_v5_gn_1_126041 Lactuca sativa HOM05D005665 ORTHO05D007230 7.6e-19 96.7 68 72.1
Os02g0639600 Oryza sativa ssp. japonica HOM05D005665 ORTHO05D007230 7.6e-19 96.7 68 67.6
SHI01876 Sapria himalayana HOM05D005665 ORTHO05D007230 7.6e-19 96.7 66 68.2
TPR.G36824 Trifolium pratense HOM05D005665 ORTHO05D007230 7.6e-19 96.7 66 69.7
CDE01G0218 Ceratophyllum demersum HOM05D005098 ORTHO05D006646 9.9e-19 96.3 68 66.2
Nn1g06596 Nelumbo nucifera HOM05D005665 ORTHO05D007230 9.9e-19 96.3 67 68.7
Migut.M01155 Erythranthe guttata HOM05D005665 ORTHO05D007230 1.3e-18 95.9 68 69.1
Sed0027057 Sechium edule HOM05D005665 ORTHO05D007230 1.3e-18 95.9 66 68.2
Haze_06494 Corylus avellana HOM05D005665 ORTHO05D007230 1.7e-18 95.5 66 71.2
Sed0024618 Sechium edule HOM05D005665 ORTHO05D007230 1.7e-18 95.5 66 71.2
Aa31LG9G9560 Aethionema arabicum HOM05D005665 ORTHO05D007230 2.2e-18 95.1 68 67.6
MD05G1314600 Malus domestica HOM05D005665 ORTHO05D007230 2.2e-18 95.1 52 82.7
Lj6g0021271 Lotus japonicus HOM05D005665 ORTHO05D007230 2.9e-18 94.7 63 73.0
Medtr2g013070 Medicago truncatula HOM05D005665 ORTHO05D007230 2.9e-18 94.7 66 69.7
Psat1g206640 Pisum sativum HOM05D005665 ORTHO05D007230 2.9e-18 94.7 66 68.2
Ah.09g237240 Amaranthus hybridus HOM05D005665 ORTHO05D007230 6.4e-18 93.6 66 69.7
Zm00001eb075800 Zea mays HOM05D005665 ORTHO05D007230 6.4e-18 93.6 68 66.2
TWI38G1053 Tripterygium wilfordii HOM05D005665 ORTHO05D007230 8.4e-18 93.2 68 64.7
Phvul.006G187100 Phaseolus vulgaris HOM05D005665 ORTHO05D007230 4.2e-17 90.9 63 69.8
VMungo0540G1872 Vigna mungo HOM05D005665 ORTHO05D007230 9.3e-17 89.7 63 68.3
arahy.Tifrunner.gnm1.ann1.5IXZ6F Arachis hypogaea HOM05D005665 ORTHO05D007230 1.2e-16 89.4 66 66.7
arahy.Tifrunner.gnm1.ann1.C923ZL Arachis hypogaea HOM05D005665 ORTHO05D007230 1.2e-16 89.4 66 66.7
SEGI_10058 Sequoiadendron giganteum HOM05D005665 ORTHO05D007230 1.6e-16 89.0 66 66.7
HPP92_021012 Vanilla planifolia HOM05D005665 ORTHO05D007230 3.5e-16 87.8 68 63.2
Pp3c23_19370 Physcomitrium patens HOM05D005665 ORTHO05D007230 3.0e-15 84.7 66 60.6
Pp3c23_19371 Physcomitrium patens HOM05D005665 ORTHO05D007230 3.0e-15 84.7 66 60.6
unitig_21.g20852 Utricularia gibba HOM05D005665 ORTHO05D007230 2.5e-14 81.6 66 57.6
Mapoly0083s0054 Marchantia polymorpha HOM05D005665 ORTHO05D007230 4.3e-14 80.9 66 59.1
MELO3C007292.2 Cucumis melo HOM05D005665 ORTHO05D039877 1.3e-13 79.3 58 67.2
SMO364G0702 Selaginella moellendorffii HOM05D005665 ORTHO05D007230 3.6e-13 77.8 63 61.9
AagrBONN_evm.TU.Sc2ySwM_344.2491 Anthoceros agrestis HOM05D005665 ORTHO05D007230 1.5e-11 72.4 66 53.0
TAR629G1936 Trochodendron aralioides HOM05D000151 ORTHO05D000074 3.8e-10 67.8 43 79.1
AagrBONN_evm.TU.Sc2ySwM_344.2084 Anthoceros agrestis HOM05D005665 ORTHO05D007230 4.9e-10 67.4 66 48.5


User provided reference genes

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