Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g23330 Brassica carinata HOM05D003839 ORTHO05D003352 7.1e-130 467.2 230 100.0
BolC6t38134H Brassica oleracea HOM05D003839 ORTHO05D003352 2.6e-39 166.4 120 69.2
BraA01t03014Z Brassica rapa HOM05D003839 ORTHO05D003352 2.2e-38 163.3 120 67.5
BcaB06g26804 Brassica carinata HOM05D003839 ORTHO05D003352 1.9e-37 160.2 121 66.1
BcaC03g17189 Brassica carinata HOM05D003839 ORTHO05D003352 4.1e-37 159.1 120 65.8
A05p17610 Brassica napus HOM05D003839 ORTHO05D003352 7.1e-37 158.3 121 65.3
BcaC03g17190 Brassica carinata HOM05D003839 ORTHO05D003352 1.6e-36 157.1 120 65.8
A05p21770 Brassica napus HOM05D003839 ORTHO05D003352 2.7e-36 156.4 124 65.3
BraA01t02749Z Brassica rapa HOM05D003839 ORTHO05D003352 2.7e-36 156.4 120 65.8
BraA05t21098Z Brassica rapa HOM05D003839 ORTHO05D003352 2.7e-36 156.4 124 65.3
C04p41030 Brassica napus HOM05D003839 ORTHO05D003352 1.3e-35 154.1 120 65.0
BolC4t25686H Brassica oleracea HOM05D003839 ORTHO05D003352 1.3e-35 154.1 120 65.0
A02p28670 Brassica napus HOM05D003839 ORTHO05D003352 5.1e-35 152.1 121 65.3
BraA02t07902Z Brassica rapa HOM05D003839 ORTHO05D003352 5.1e-35 152.1 121 65.3
BcaB04g18348 Brassica carinata HOM05D003839 ORTHO05D003352 1.1e-34 151.0 128 60.9
A04p07260 Brassica napus HOM05D003839 ORTHO05D003352 1.9e-34 150.2 119 62.2
BolC5t32306H Brassica oleracea HOM05D003839 ORTHO05D003352 1.9e-34 150.2 121 64.5
BraA04t16421Z Brassica rapa HOM05D003839 ORTHO05D003352 1.9e-34 150.2 119 62.2
BcaC05g29109 Brassica carinata HOM05D003839 ORTHO05D003352 2.5e-34 149.8 121 64.5
C05p53370 Brassica napus HOM05D003839 ORTHO05D003352 2.5e-34 149.8 121 64.5
BraA01t02837Z Brassica rapa HOM05D003839 ORTHO05D003352 2.5e-34 149.8 123 65.0
BcaC05g27601 Brassica carinata HOM05D003839 ORTHO05D003352 4.3e-34 149.1 121 64.5
C05p35870 Brassica napus HOM05D003839 ORTHO05D003352 4.3e-34 149.1 121 64.5
C02p27640 Brassica napus HOM05D003839 ORTHO05D003352 9.5e-34 147.9 121 64.5
BolC8t48491H Brassica oleracea HOM05D003839 ORTHO05D003352 1.6e-33 147.1 121 63.6
BcaC06g33695 Brassica carinata HOM05D003839 ORTHO05D003352 2.1e-33 146.7 121 63.6
BcaB08g35818 Brassica carinata HOM05D003839 ORTHO05D003352 2.8e-33 146.4 120 62.5
A05p21290 Brassica napus HOM05D003839 ORTHO05D003352 3.6e-33 146.0 121 62.8
C05p53340 Brassica napus HOM05D003839 ORTHO05D003352 3.6e-33 146.0 121 63.6
BraA05t21037Z Brassica rapa HOM05D003839 ORTHO05D003352 3.6e-33 146.0 121 62.8
BcaB06g26196 Brassica carinata HOM05D003839 ORTHO05D003352 1.8e-32 143.7 128 58.6
BolC5t34007H Brassica oleracea HOM05D003839 ORTHO05D003352 2.4e-32 143.3 121 62.0
A09p32650 Brassica napus HOM05D003839 ORTHO05D003352 4.0e-32 142.5 119 60.5
C03p63060 Brassica napus HOM05D003839 ORTHO05D003352 1.2e-31 141.0 121 62.0
BcaB05g23505 Brassica carinata HOM05D003839 ORTHO05D003352 1.5e-31 140.6 120 60.8
BcaB04g17572 Brassica carinata HOM05D003839 ORTHO05D003352 2.6e-31 139.8 121 61.2
BcaB07g32710 Brassica carinata HOM05D003839 ORTHO05D003352 4.4e-31 139.0 121 62.0
BcaB01g01663 Brassica carinata HOM05D003839 ORTHO05D003352 1.3e-30 137.5 128 55.5
BcaB01g01517 Brassica carinata HOM05D003839 ORTHO05D003352 1.9e-29 133.7 121 61.2
BcaB02g06777 Brassica carinata HOM05D003839 ORTHO05D003352 3.2e-29 132.9 128 56.2
BcaB07g31055 Brassica carinata HOM05D003839 ORTHO05D003352 3.2e-29 132.9 77 81.8
BcaC03g15184 Brassica carinata HOM05D003839 ORTHO05D003352 2.1e-28 130.2 122 59.8
A03p67260 Brassica napus HOM05D003839 ORTHO05D003352 1.3e-27 127.5 99 64.6
BcaC04g22104 Brassica carinata HOM05D003839 ORTHO05D003352 1.5e-26 124.0 121 57.9
BolC2t09048H Brassica oleracea HOM05D003839 ORTHO05D003352 2.8e-25 119.8 97 64.9
BolC2t11209H Brassica oleracea HOM05D003839 ORTHO05D003352 1.8e-24 117.1 83 68.7
BolC9t57767H Brassica oleracea HOM05D003839 ORTHO05D003352 2.4e-24 116.7 97 63.9
C02p27160 Brassica napus HOM05D003839 ORTHO05D003352 4.0e-24 115.9 85 65.9
BcaC09g50233 Brassica carinata HOM05D003839 ORTHO05D003352 9.0e-24 114.8 121 55.4
BcaB07g32949 Brassica carinata HOM05D003839 ORTHO05D003352 3.4e-23 112.8 120 48.3
A05p20350 Brassica napus HOM05D003839 ORTHO05D003352 5.8e-23 112.1 99 58.6
BcaB04g17113 Brassica carinata HOM05D003839 ORTHO05D003352 7.6e-23 111.7 120 49.2
BcaB03g16839 Brassica carinata HOM05D003839 ORTHO05D003352 9.9e-23 111.3 120 48.3
BcaC06g36011 Brassica carinata HOM05D003839 ORTHO05D003352 1.7e-22 110.5 121 52.9
BcaB01g00721 Brassica carinata HOM05D003839 ORTHO05D003352 2.2e-22 110.2 120 47.5
BcaB07g32609 Brassica carinata HOM05D003839 ORTHO05D003352 2.9e-22 109.8 111 49.5
BcaB06g27258 Brassica carinata HOM05D003839 ORTHO05D003352 4.9e-22 109.0 120 47.5
BcaB01g02875 Brassica carinata HOM05D003839 ORTHO05D003352 8.4e-22 108.2 120 47.5
C09p23320 Brassica napus HOM05D003839 ORTHO05D003352 2.4e-21 106.7 73 69.9
BcaC07g38083 Brassica carinata HOM05D003839 ORTHO05D003352 5.4e-21 105.5 83 66.3
BraA08t34532Z Brassica rapa HOM05D003839 ORTHO05D003352 2.1e-20 103.6 103 50.5
C03p63070 Brassica napus HOM05D003839 ORTHO05D003352 1.0e-19 101.3 73 65.8
A05p03580 Brassica napus HOM05D003839 ORTHO05D003352 1.5e-18 97.4 131 43.5
C04p45570 Brassica napus HOM05D011428 ORTHO05D103779 1.5e-18 97.4 66 72.7
C04p25750 Brassica napus HOM05D003839 ORTHO05D003352 1.9e-18 97.1 102 50.0
BraA02t07568Z Brassica rapa HOM05D008292 ORTHO05D003352 4.3e-18 95.9 130 43.1
BolC4t24234H Brassica oleracea HOM05D003839 ORTHO05D003352 5.6e-18 95.5 102 49.0
BcaC02g10611 Brassica carinata HOM05D003839 ORTHO05D003352 2.1e-17 93.6 93 51.6
BcaB06g27469 Brassica carinata HOM05D003839 ORTHO05D003352 3.6e-17 92.8 71 62.0
C02p24590 Brassica napus HOM05D003839 ORTHO05D003352 3.6e-17 92.8 127 38.6
BcaB02g07569 Brassica carinata HOM05D003839 ORTHO05D003352 2.4e-16 90.1 81 58.0
BcaB01g00514 Brassica carinata HOM05D003839 ORTHO05D003352 5.3e-16 89.0 72 59.7
BcaC03g15389 Brassica carinata HOM05D003839 ORTHO05D003352 5.3e-16 89.0 112 44.6
BolC7t43565H Brassica oleracea HOM05D003839 ORTHO05D003352 5.3e-16 89.0 112 44.6
BcaC03g16634 Brassica carinata HOM05D003839 ORTHO05D003352 6.9e-16 88.6 120 42.5
BcaB08g35819 Brassica carinata HOM05D003839 ORTHO05D003352 2.6e-15 86.7 65 63.1
C03p67990 Brassica napus HOM05D003839 ORTHO05D003352 4.5e-15 85.9 90 45.6
BcaC01g02162 Brassica carinata HOM05D003839 ORTHO05D003352 9.9e-15 84.7 112 41.1
C04p19440 Brassica napus HOM05D011428 ORTHO05D103076 2.4e-13 80.1 67 65.7
C01p14570 Brassica napus HOM05D000096 ORTHO05D000045 9.3e-13 78.2 56 67.9
BolC1t01413H Brassica oleracea HOM05D000096 ORTHO05D000045 9.3e-13 78.2 56 67.9
BcaB07g30584 Brassica carinata HOM05D003839 ORTHO05D003352 3.5e-12 76.3 77 49.4
Thhalv10005441m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 4.6e-12 75.9 106 38.7
BcaB03g16489 Brassica carinata HOM05D003839 ORTHO05D003352 6.0e-12 75.5 74 50.0
BcaB06g26117 Brassica carinata HOM05D003839 ORTHO05D003352 1.0e-11 74.7 103 44.7
C02p01000 Brassica napus HOM05D011428 ORTHO05D101574 2.3e-11 73.6 65 60.0
BolC3t19025H Brassica oleracea HOM05D003839 ORTHO05D003352 3.0e-11 73.2 75 45.3
C03p91870 Brassica napus HOM05D003839 ORTHO05D003352 5.1e-11 72.4 89 38.2
C04p33340 Brassica napus HOM05D003839 ORTHO05D003352 5.1e-11 72.4 89 39.3
C06p50270 Brassica napus HOM05D003839 ORTHO05D003352 5.1e-11 72.4 89 39.3
BolC3t21507H Brassica oleracea HOM05D003839 ORTHO05D003352 5.1e-11 72.4 89 38.2
BcaC09g48414 Brassica carinata HOM05D003839 ORTHO05D003352 1.1e-10 71.2 69 46.4
C02p51180 Brassica napus HOM05D003839 ORTHO05D003352 1.1e-10 71.2 55 67.3
Thhalv10002269m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 1.1e-10 71.2 87 36.8
BcaB01g00717 Brassica carinata HOM05D003839 ORTHO05D003352 1.5e-10 70.9 61 52.5
Thhalv10003388m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 2.5e-10 70.1 85 37.6
BcaC08g43741 Brassica carinata HOM05D003839 ORTHO05D003352 5.6e-10 68.9 52 55.8
BcaB05g24307 Brassica carinata HOM05D003839 ORTHO05D003352 1.3e-09 67.8 128 33.6
BcaB02g06630 Brassica carinata HOM05D003839 ORTHO05D003352 2.1e-09 67.0 113 34.5
BcaC01g01423 Brassica carinata HOM05D003839 ORTHO05D003352 2.1e-09 67.0 86 37.2
BolC5t34000H Brassica oleracea HOM05D003839 ORTHO05D003352 2.8e-09 66.6 45 66.7
BolC6t35618H Brassica oleracea HOM05D003839 ORTHO05D003352 2.8e-09 66.6 85 38.8
Thhalv10005434m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 2.8e-09 66.6 93 35.5
BolC1t03162H Brassica oleracea HOM05D003839 ORTHO05D003352 3.7e-09 66.2 82 46.3
C08p34220 Brassica napus HOM05D003839 ORTHO05D003352 6.2e-09 65.5 89 41.6
BolC8t51019H Brassica oleracea HOM05D003839 ORTHO05D003352 6.2e-09 65.5 89 41.6
BcaC09g48196 Brassica carinata HOM05D003839 ORTHO05D039488 8.1e-09 65.1 64 48.4
BolC1t05291H Brassica oleracea HOM05D003839 ORTHO05D039488 8.1e-09 65.1 64 48.4
BcaB08g35221 Brassica carinata HOM05D003839 ORTHO05D003352 1.1e-08 64.7 80 36.2
C05p17950 Brassica napus HOM05D003839 ORTHO05D003352 1.1e-08 64.7 66 48.5
Thhalv10003316m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 1.1e-08 64.7 87 37.9
BcaB04g17896 Brassica carinata HOM05D003839 ORTHO05D003352 1.4e-08 64.3 146 29.5
BcaB04g18557 Brassica carinata HOM05D003839 ORTHO05D003352 1.4e-08 64.3 61 49.2
C08p08050 Brassica napus HOM05D003839 ORTHO05D003352 1.4e-08 64.3 100 39.0
BolC2t10492H Brassica oleracea HOM05D003839 ORTHO05D003352 1.4e-08 64.3 85 37.6
BcaB05g21582 Brassica carinata HOM05D003839 ORTHO05D003352 1.8e-08 63.9 61 49.2
BcaC07g37358 Brassica carinata HOM05D003839 ORTHO05D003352 1.8e-08 63.9 94 40.4
C03p57520 Brassica napus HOM05D014297 ORTHO05D019911 1.8e-08 63.9 88 33.0
BcaC04g22280 Brassica carinata HOM05D003839 ORTHO05D003352 2.4e-08 63.5 108 33.3
BcaC06g35172 Brassica carinata HOM05D003839 ORTHO05D003352 2.4e-08 63.5 59 61.0
C09p49180 Brassica napus HOM05D003839 ORTHO05D003352 3.1e-08 63.2 74 44.6
BcaC05g27209 Brassica carinata HOM05D003839 ORTHO05D003352 4.0e-08 62.8 60 58.3
C01p50050 Brassica napus HOM05D003839 ORTHO05D003352 5.3e-08 62.4 52 50.0
C02p44490 Brassica napus HOM05D003839 ORTHO05D003352 6.9e-08 62.0 85 36.5
C09p21410 Brassica napus HOM05D003839 ORTHO05D003352 6.9e-08 62.0 114 32.5
BraA07t28801Z Brassica rapa HOM05D003839 ORTHO05D003352 6.9e-08 62.0 114 31.6
BraA09t40513Z Brassica rapa HOM05D003839 ORTHO05D003352 6.9e-08 62.0 81 38.3
CARHR101890 Cardamine hirsuta HOM05D008292 ORTHO05D003352 6.9e-08 62.0 87 33.3
C09p40850 Brassica napus HOM05D000353 ORTHO05D000174 9.0e-08 61.6 50 60.0
BcaNung02469 Brassica carinata HOM05D003839 ORTHO05D003352 1.5e-07 60.8 85 36.5
A03p53810 Brassica napus HOM05D000357 ORTHO05D000242 1.5e-07 60.8 79 35.4
A09p20270 Brassica napus HOM05D003839 ORTHO05D003352 1.5e-07 60.8 114 30.7
C07p40670 Brassica napus HOM05D003839 ORTHO05D003352 1.5e-07 60.8 85 36.5
BolC9t56966H Brassica oleracea HOM05D011428 ORTHO05D017614 1.5e-07 60.8 56 57.1
BolC9t55033H Brassica oleracea HOM05D003839 ORTHO05D003352 2.6e-07 60.1 87 35.6
BraA01t02030Z Brassica rapa HOM05D035072 ORTHO05D003352 2.6e-07 60.1 60 45.0
Thhalv10002917m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 2.6e-07 60.1 95 32.6
BcaB07g31374 Brassica carinata HOM05D003839 ORTHO05D003352 4.5e-07 59.3 93 37.6
C07p08430 Brassica napus HOM05D008292 ORTHO05D003352 4.5e-07 59.3 107 32.7
BolC3t15567H Brassica oleracea HOM05D008292 ORTHO05D003352 7.6e-07 58.5 107 31.8
BolC3t20345H Brassica oleracea HOM05D003839 ORTHO05D003352 7.6e-07 58.5 62 46.8
BolC4t27106H Brassica oleracea HOM05D011428 ORTHO05D017614 7.6e-07 58.5 56 55.4
BcaC01g02980 Brassica carinata HOM05D003839 ORTHO05D003352 1.0e-06 58.2 64 39.1
C09p45620 Brassica napus HOM05D001434 ORTHO05D004586 1.3e-06 57.8 113 34.5
BraA07t31040Z Brassica rapa HOM05D006725 ORTHO05D008223 1.3e-06 57.8 71 40.8
BcaC04g21847 Brassica carinata HOM05D009411 ORTHO05D014997 1.7e-06 57.4 61 41.0
A05p32880 Brassica napus HOM05D008292 ORTHO05D003352 1.7e-06 57.4 105 27.6
A06p43440 Brassica napus HOM05D011428 ORTHO05D017614 1.7e-06 57.4 56 55.4
C06p24070 Brassica napus HOM05D018430 ORTHO05D020143 1.7e-06 57.4 65 41.5
C09p26700 Brassica napus HOM05D009411 ORTHO05D014997 1.7e-06 57.4 61 41.0
BolC9t55562H Brassica oleracea HOM05D009411 ORTHO05D014997 1.7e-06 57.4 61 41.0
BraA05t22695Z Brassica rapa HOM05D008292 ORTHO05D003352 1.7e-06 57.4 105 27.6
BraA06t27229Z Brassica rapa HOM05D011428 ORTHO05D017614 1.7e-06 57.4 56 55.4
C07p29940 Brassica napus HOM05D003839 ORTHO05D003352 2.2e-06 57.0 86 39.5
BcaC03g15793 Brassica carinata HOM05D008292 ORTHO05D003352 2.9e-06 56.6 97 26.8
A09p19700 Brassica napus HOM05D003839 ORTHO05D003352 2.9e-06 56.6 102 33.3
BolC4t27064H Brassica oleracea HOM05D008292 ORTHO05D003352 2.9e-06 56.6 100 27.0
BolC4t27974H Brassica oleracea HOM05D003839 ORTHO05D003352 2.9e-06 56.6 73 38.4
C07p34600 Brassica napus HOM05D009411 ORTHO05D014997 3.8e-06 56.2 61 39.3
BolC7t43992H Brassica oleracea HOM05D009411 ORTHO05D014997 3.8e-06 56.2 61 39.3
BcaB05g23090 Brassica carinata HOM05D003839 ORTHO05D032372 4.9e-06 55.8 52 51.9
BcaC07g37053 Brassica carinata HOM05D008292 ORTHO05D003352 4.9e-06 55.8 110 26.4
C03p19740 Brassica napus HOM05D008292 ORTHO05D003352 4.9e-06 55.8 105 27.6
BraA08t34531Z Brassica rapa HOM05D008292 ORTHO05D003352 4.9e-06 55.8 93 30.1
C03p32250 Brassica napus HOM05D008292 ORTHO05D003352 6.4e-06 55.5 107 30.8
BolC6t35914H Brassica oleracea HOM05D003839 ORTHO05D003352 6.4e-06 55.5 74 39.2
BcaC06g36055 Brassica carinata HOM05D008292 ORTHO05D003352 8.4e-06 55.1 72 31.9
A03p53820 Brassica napus HOM05D000943 ORTHO05D002475 8.4e-06 55.1 85 32.9
BolC6t39088H Brassica oleracea HOM05D008292 ORTHO05D003352 8.4e-06 55.1 111 29.7


User provided reference genes

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