Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g23273 Brassica carinata HOM05D000496 ORTHO05D000411 3.8e-188 661.4 339 100.0
BcaB06g28121 Brassica carinata HOM05D000496 ORTHO05D000411 1.8e-97 360.1 360 58.6
BcaB06g26381 Brassica carinata HOM05D000496 ORTHO05D000411 1.6e-93 347.1 360 56.1
BcaB04g17470 Brassica carinata HOM05D000496 ORTHO05D000411 2.0e-80 303.5 359 51.8
BcaB03g14222 Brassica carinata HOM05D000496 ORTHO05D000411 1.1e-78 297.7 354 51.4
BcaC09g49110 Brassica carinata HOM05D000496 ORTHO05D000411 3.9e-68 262.7 373 45.0
BcaC02g10837 Brassica carinata HOM05D000496 ORTHO05D000411 9.7e-67 258.1 358 46.6
BcaB05g23269 Brassica carinata HOM05D000496 ORTHO05D091275 3.9e-52 209.5 108 100.0
BcaB06g26647 Brassica carinata HOM05D000496 ORTHO05D000411 1.7e-50 204.1 367 42.8
BcaC01g01817 Brassica carinata HOM05D000496 ORTHO05D000411 1.1e-49 201.4 369 40.1
BolC4t25099H Brassica oleracea HOM05D000496 ORTHO05D032642 9.1e-49 198.4 369 39.3
BcaC02g09892 Brassica carinata HOM05D000496 ORTHO05D032642 2.6e-48 196.8 369 39.0
BcaC02g10520 Brassica carinata HOM05D000496 ORTHO05D000411 2.6e-48 196.8 355 39.2
C04p35470 Brassica napus HOM05D000496 ORTHO05D032642 2.6e-48 196.8 369 39.0
BcaC04g20576 Brassica carinata HOM05D000496 ORTHO05D039987 5.9e-48 195.7 363 39.9
BcaC01g03089 Brassica carinata HOM05D000496 ORTHO05D000411 1.5e-43 181.0 365 38.9
BcaC08g44039 Brassica carinata HOM05D000496 ORTHO05D014937 2.0e-43 180.6 369 36.9
BcaC08g47088 Brassica carinata HOM05D000496 ORTHO05D000411 9.7e-43 178.3 373 38.6
BcaC03g15800 Brassica carinata HOM05D000496 ORTHO05D000411 1.7e-42 177.6 361 37.4
BcaC08g44837 Brassica carinata HOM05D000496 ORTHO05D000411 1.1e-41 174.9 377 37.7
BcaC06g36700 Brassica carinata HOM05D000496 ORTHO05D000411 3.1e-41 173.3 376 38.0
BcaC03g15107 Brassica carinata HOM05D000496 ORTHO05D000411 4.1e-41 172.9 371 37.2
BcaC03g15984 Brassica carinata HOM05D000496 ORTHO05D000411 5.3e-41 172.6 364 38.5
BcaB06g26352 Brassica carinata HOM05D000496 ORTHO05D000411 9.1e-41 171.8 149 61.7
BcaC07g37066 Brassica carinata HOM05D000496 ORTHO05D039815 9.1e-41 171.8 310 40.6
BcaC06g36711 Brassica carinata HOM05D000496 ORTHO05D000411 3.5e-40 169.9 230 46.5
BcaC08g46179 Brassica carinata HOM05D000496 ORTHO05D000411 3.5e-40 169.9 361 38.0
BcaB08g35328 Brassica carinata HOM05D000496 ORTHO05D000411 4.5e-40 169.5 365 38.4
BcaC01g02163 Brassica carinata HOM05D000496 ORTHO05D000411 7.7e-40 168.7 367 34.9
BcaC05g27417 Brassica carinata HOM05D000496 ORTHO05D000411 7.7e-40 168.7 348 37.9
BcaNung02816 Brassica carinata HOM05D000496 ORTHO05D000411 1.0e-39 168.3 372 36.3
BcaC03g15417 Brassica carinata HOM05D000496 ORTHO05D000411 1.3e-39 167.9 360 37.8
BcaC03g16444 Brassica carinata HOM05D000496 ORTHO05D000411 2.2e-39 167.2 355 38.3
BcaC08g45123 Brassica carinata HOM05D000496 ORTHO05D000411 3.2e-38 163.3 379 35.9
BcaB07g33378 Brassica carinata HOM05D000496 ORTHO05D095967 5.5e-38 162.5 239 47.3
BcaC04g22294 Brassica carinata HOM05D000496 ORTHO05D000411 1.6e-37 161.0 348 35.9
BcaC04g21671 Brassica carinata HOM05D000496 ORTHO05D000411 6.1e-37 159.1 352 37.2
BcaB04g17612 Brassica carinata HOM05D000496 ORTHO05D090729 1.4e-36 157.9 192 49.5
BcaC03g14200 Brassica carinata HOM05D000496 ORTHO05D000411 1.4e-36 157.9 373 35.4
BcaNung04301 Brassica carinata HOM05D000496 ORTHO05D000411 2.3e-36 157.1 354 39.3
BcaC08g43454 Brassica carinata HOM05D000496 ORTHO05D031880 5.2e-36 156.0 374 35.3
BcaC02g10789 Brassica carinata HOM05D000496 ORTHO05D000411 6.7e-36 155.6 379 36.9
BcaC08g43480 Brassica carinata HOM05D000496 ORTHO05D000411 2.8e-34 150.2 378 35.7
BolC2t10251H Brassica oleracea HOM05D000496 ORTHO05D000411 2.8e-34 150.2 198 46.0
C06p14200 Brassica napus HOM05D000496 ORTHO05D000411 8.3e-34 148.7 191 46.6
BolC3t17901H Brassica oleracea HOM05D000496 ORTHO05D000411 1.8e-33 147.5 188 46.8
BolC8t48398H Brassica oleracea HOM05D000496 ORTHO05D000411 2.4e-33 147.1 373 35.4
BolC1t05084H Brassica oleracea HOM05D000496 ORTHO05D000411 5.3e-33 146.0 196 44.9
BcaC01g01165 Brassica carinata HOM05D000496 ORTHO05D000411 7.0e-33 145.6 345 36.5
BcaB06g26444 Brassica carinata HOM05D000496 ORTHO05D091650 1.6e-32 144.4 227 45.4
BcaC01g03438 Brassica carinata HOM05D000496 ORTHO05D000411 2.0e-32 144.1 298 35.9
BcaC07g38016 Brassica carinata HOM05D000496 ORTHO05D000411 3.5e-32 143.3 360 35.3
BcaC02g10380 Brassica carinata HOM05D000496 ORTHO05D000411 7.7e-32 142.1 341 36.4
BcaB08g35848 Brassica carinata HOM05D000496 ORTHO05D000411 1.3e-31 141.4 362 36.2
BcaC03g14607 Brassica carinata HOM05D000496 ORTHO05D031790 1.3e-31 141.4 361 36.3
BcaC02g08910 Brassica carinata HOM05D000496 ORTHO05D000411 3.8e-31 139.8 169 50.3
BcaC04g19440 Brassica carinata HOM05D000496 ORTHO05D000411 3.8e-31 139.8 363 33.3
BcaC05g27815 Brassica carinata HOM05D000496 ORTHO05D000411 3.8e-31 139.8 160 50.6
BcaC07g37237 Brassica carinata HOM05D000496 ORTHO05D000411 2.5e-30 137.1 351 34.2
BcaC01g02211 Brassica carinata HOM05D000496 ORTHO05D000411 3.2e-30 136.7 353 35.7
BcaC01g00867 Brassica carinata HOM05D010392 ORTHO05D040019 9.4e-30 135.2 381 33.1
BcaC03g15709 Brassica carinata HOM05D000496 ORTHO05D000411 1.2e-29 134.8 354 34.7
A05p19890 Brassica napus HOM05D000496 ORTHO05D000411 1.2e-29 134.8 374 34.5
BcaC09g47909 Brassica carinata HOM05D000496 ORTHO05D000411 1.6e-29 134.4 352 35.8
BcaC05g30568 Brassica carinata HOM05D000496 ORTHO05D000411 2.7e-29 133.7 188 41.5
BcaB01g03110 Brassica carinata HOM05D000496 ORTHO05D000411 4.7e-29 132.9 370 35.1
BolC8t47230H Brassica oleracea HOM05D000496 ORTHO05D039815 1.4e-28 131.3 265 38.1
BcaC03g15569 Brassica carinata HOM05D000496 ORTHO05D000411 1.8e-28 131.0 373 34.0
BcaC07g39538 Brassica carinata HOM05D000496 ORTHO05D000411 2.3e-28 130.6 187 44.9
BcaC08g43453 Brassica carinata HOM05D000496 ORTHO05D031880 2.3e-28 130.6 344 33.4
BraA09t39002Z Brassica rapa HOM05D000496 ORTHO05D000411 6.8e-28 129.0 110 57.3
BcaB01g02232 Brassica carinata HOM05D000496 ORTHO05D000411 4.4e-27 126.3 287 34.8
BcaC05g28121 Brassica carinata HOM05D000496 ORTHO05D039070 4.4e-27 126.3 331 32.9
BcaC09g50802 Brassica carinata HOM05D000496 ORTHO05D000411 4.4e-27 126.3 371 34.0
BcaC05g27902 Brassica carinata HOM05D000496 ORTHO05D000411 1.7e-26 124.4 367 32.2
BcaC01g01905 Brassica carinata HOM05D000496 ORTHO05D014937 2.8e-26 123.6 297 37.4
BcaC06g36471 Brassica carinata HOM05D000496 ORTHO05D000411 3.7e-26 123.2 187 42.8
C05p49720 Brassica napus HOM05D000496 ORTHO05D000411 4.8e-26 122.9 164 45.1
BraA01t02446Z Brassica rapa HOM05D000496 ORTHO05D000411 1.4e-25 121.3 306 36.3
BcaC03g14957 Brassica carinata HOM05D000496 ORTHO05D000411 1.8e-25 120.9 212 41.5
BcaC06g36146 Brassica carinata HOM05D000496 ORTHO05D000411 3.1e-25 120.2 330 33.0
BcaC07g37461 Brassica carinata HOM05D000496 ORTHO05D014937 3.1e-25 120.2 371 32.1
BcaC03g14601 Brassica carinata HOM05D000496 ORTHO05D027466 1.6e-24 117.9 172 44.8
BolC2t08174H Brassica oleracea HOM05D000496 ORTHO05D027466 1.6e-24 117.9 172 44.8
BolC9t55777H Brassica oleracea HOM05D000496 ORTHO05D000411 7.7e-24 115.5 119 56.3
BcaC06g35766 Brassica carinata HOM05D000496 ORTHO05D000411 2.9e-23 113.6 372 32.5
BolC7t44304H Brassica oleracea HOM05D000496 ORTHO05D027466 5.0e-23 112.8 180 41.7
BcaB06g26351 Brassica carinata HOM05D000496 ORTHO05D092167 6.6e-23 112.5 99 60.6
BcaB04g17732 Brassica carinata HOM05D000496 ORTHO05D000411 1.5e-22 111.3 102 53.9
BcaC01g00534 Brassica carinata HOM05D000020 ORTHO05D000543 1.9e-22 110.9 369 31.2
BcaNung03852 Brassica carinata HOM05D000496 ORTHO05D000411 1.9e-22 110.9 101 54.5
BcaB01g02810 Brassica carinata HOM05D000496 ORTHO05D000411 4.2e-22 109.8 377 30.0
BcaC04g19004 Brassica carinata HOM05D000496 ORTHO05D000411 2.3e-20 104.0 355 33.0
BcaB07g32484 Brassica carinata HOM05D000496 ORTHO05D000411 4.0e-20 103.2 352 31.0
BcaB04g17691 Brassica carinata HOM05D000496 ORTHO05D000411 8.9e-20 102.1 359 32.0
BcaC05g26989 Brassica carinata HOM05D000496 ORTHO05D000411 1.5e-19 101.3 352 31.0
C09p62330 Brassica napus HOM05D058036 ORTHO05D032289 2.6e-19 100.5 117 47.9
BcaC09g48334 Brassica carinata HOM05D000496 ORTHO05D000411 5.7e-19 99.4 332 28.3
BolC3t19455H Brassica oleracea HOM05D000496 ORTHO05D032668 1.4e-17 94.7 187 38.0
BcaC04g21194 Brassica carinata HOM05D000496 ORTHO05D000411 1.8e-17 94.4 69 65.2
BcaC06g34564 Brassica carinata HOM05D000496 ORTHO05D000411 2.0e-16 90.9 89 50.6
BcaC04g22204 Brassica carinata HOM05D000496 ORTHO05D000411 3.5e-16 90.1 316 31.6
BcaC06g36712 Brassica carinata HOM05D000496 ORTHO05D032668 5.9e-16 89.4 123 43.9
BcaC09g49773 Brassica carinata HOM05D000496 ORTHO05D000411 5.9e-16 89.4 295 33.9
BcaC05g28639 Brassica carinata HOM05D000496 ORTHO05D000411 1.3e-15 88.2 65 66.2
BcaC07g38782 Brassica carinata HOM05D000496 ORTHO05D000411 1.7e-15 87.8 354 27.4
C09p21780 Brassica napus HOM05D000496 ORTHO05D000411 1.7e-15 87.8 82 54.9
BcaC06g35070 Brassica carinata HOM05D000496 ORTHO05D000411 2.3e-15 87.4 76 55.3
BolC6t39184H Brassica oleracea HOM05D000496 ORTHO05D000411 2.5e-14 84.0 55 65.5
BcaB08g37273 Brassica carinata HOM05D000496 ORTHO05D000411 5.6e-14 82.8 303 31.4
BcaC09g49480 Brassica carinata HOM05D000496 ORTHO05D000411 5.6e-14 82.8 80 50.0
BcaC06g35493 Brassica carinata HOM05D010392 ORTHO05D000411 7.3e-14 82.4 301 31.9
BcaB06g27378 Brassica carinata HOM05D000496 ORTHO05D000411 1.2e-13 81.6 360 28.6
BcaC01g02150 Brassica carinata HOM05D000496 ORTHO05D000411 2.1e-13 80.9 55 63.6
BcaC02g07871 Brassica carinata HOM05D000496 ORTHO05D000411 2.1e-13 80.9 371 28.6
BolC6t35943H Brassica oleracea HOM05D000496 ORTHO05D000411 2.1e-13 80.9 323 30.7
BcaC04g21355 Brassica carinata HOM05D000496 ORTHO05D000411 4.7e-13 79.7 350 28.3
C09p41980 Brassica napus HOM05D060912 ORTHO05D039987 8.0e-13 79.0 188 34.0
BcaC09g48800 Brassica carinata HOM05D000496 ORTHO05D000411 1.0e-12 78.6 77 51.9
BcaB07g33944 Brassica carinata HOM05D010392 ORTHO05D000411 4.4e-11 73.2 306 31.0
BcaC04g23033 Brassica carinata HOM05D000496 ORTHO05D000411 5.8e-11 72.8 346 26.9
BcaB08g35386 Brassica carinata HOM05D000496 ORTHO05D000411 1.3e-10 71.6 141 40.4
Sp7g08940 Schrenkiella parvula HOM05D000496 ORTHO05D000411 6.4e-10 69.3 116 40.5
BcaC03g17066 Brassica carinata HOM05D000496 ORTHO05D032289 1.1e-09 68.6 67 52.2
BcaC09g48708 Brassica carinata HOM05D000496 ORTHO05D000411 1.4e-09 68.2 231 31.6
A06p26700 Brassica napus HOM05D000496 ORTHO05D032668 1.4e-09 68.2 74 50.0
BolSC21t60240H Brassica oleracea HOM05D000496 ORTHO05D000411 1.9e-09 67.8 59 54.2
A05p20030 Brassica napus HOM05D000496 ORTHO05D014937 3.2e-09 67.0 230 31.7
BraA05t20909Z Brassica rapa HOM05D000496 ORTHO05D014937 3.2e-09 67.0 230 31.7
Sp7g10700 Schrenkiella parvula HOM05D000496 ORTHO05D000411 3.2e-09 67.0 143 34.3
Thhalv10011992m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 4.1e-09 66.6 128 39.1
BcaC01g01240 Brassica carinata HOM05D000496 ORTHO05D000411 5.4e-09 66.2 76 52.6
Thhalv10019512m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 1.6e-08 64.7 128 37.5
BcaB04g18524 Brassica carinata HOM05D000496 ORTHO05D093572 2.7e-08 63.9 102 44.1
BcaC05g28479 Brassica carinata HOM05D023072 ORTHO05D000411 2.7e-08 63.9 274 29.9
Thhalv10002297m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 2.7e-08 63.9 249 28.9
Sp7g09260 Schrenkiella parvula HOM05D000496 ORTHO05D000411 2.7e-08 63.9 153 34.6
Carub.0008s1087 Capsella rubella HOM05D000496 ORTHO05D000411 3.5e-08 63.5 289 26.0
Thhalv10015762m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 6.0e-08 62.8 292 27.4
BcaB04g17268 Brassica carinata HOM05D000496 ORTHO05D000411 1.0e-07 62.0 64 48.4
BcaC05g28506 Brassica carinata HOM05D000496 ORTHO05D093697 1.3e-07 61.6 220 30.0
Sp1g33990 Schrenkiella parvula HOM05D000496 ORTHO05D000411 1.3e-07 61.6 151 32.5
BcaC06g36695 Brassica carinata HOM05D000627 ORTHO05D000365 2.3e-07 60.8 125 40.0
Thhalv10015686m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 2.3e-07 60.8 71 39.4
Sp6g04730 Schrenkiella parvula HOM05D000496 ORTHO05D000411 2.3e-07 60.8 73 37.0
BcaC09g50172 Brassica carinata HOM05D025630 ORTHO05D032542 5.0e-07 59.7 161 34.8
Sp2g05200 Schrenkiella parvula HOM05D000496 ORTHO05D000411 5.0e-07 59.7 131 31.3
Carub.0003s2750 Capsella rubella HOM05D000496 ORTHO05D000411 6.6e-07 59.3 159 31.4
BcaB04g18523 Brassica carinata HOM05D000496 ORTHO05D094062 8.6e-07 58.9 56 53.6
BcaB04g17505 Brassica carinata HOM05D000496 ORTHO05D000411 1.5e-06 58.2 365 27.4
BcaB04g17753 Brassica carinata HOM05D000496 ORTHO05D000411 1.9e-06 57.8 175 32.6
BcaB05g24502 Brassica carinata HOM05D000496 ORTHO05D000411 2.5e-06 57.4 292 27.7
BcaB06g27535 Brassica carinata HOM05D000496 ORTHO05D000411 2.5e-06 57.4 65 52.3
AL6G45480 Arabidopsis lyrata HOM05D000496 ORTHO05D000411 4.3e-06 56.6 54 50.0
Thhalv10022993m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 4.3e-06 56.6 78 38.5
Sp4g04600 Schrenkiella parvula HOM05D000496 ORTHO05D000411 4.3e-06 56.6 64 48.4
BcaC04g21836 Brassica carinata HOM05D000496 ORTHO05D000411 5.6e-06 56.2 361 24.1
BcaC01g01422 Brassica carinata HOM05D026797 ORTHO05D092604 7.3e-06 55.8 84 41.7
Sp2g05660 Schrenkiella parvula HOM05D000496 ORTHO05D000411 7.3e-06 55.8 111 29.7
Sp6g10600 Schrenkiella parvula HOM05D000496 ORTHO05D000411 7.3e-06 55.8 152 32.9
CARHR180340 Cardamine hirsuta HOM05D000496 ORTHO05D000411 9.5e-06 55.5 52 53.8
Thhalv10026902m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 9.5e-06 55.5 71 36.6


User provided reference genes

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