Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g23246 Brassica carinata HOM05D001498 ORTHO05D090900 1.1e-38 162.9 85 100.0
BcaB04g17678 Brassica carinata HOM05D001498 ORTHO05D094760 3.5e-34 147.9 82 95.1
BcaB05g23077 Brassica carinata HOM05D001498 ORTHO05D091436 1.0e-33 146.4 83 94.0
BcaB07g33315 Brassica carinata HOM05D001498 ORTHO05D091495 2.3e-33 145.2 79 96.2
BcaB05g22943 Brassica carinata HOM05D001498 ORTHO05D096110 5.1e-33 144.1 83 91.6
BcaB01g03187 Brassica carinata HOM05D001498 ORTHO05D090608 8.7e-33 143.3 82 92.7
BcaB07g33085 Brassica carinata HOM05D001498 ORTHO05D095625 1.6e-31 139.0 83 88.0
BcaB04g18314 Brassica carinata HOM05D001498 ORTHO05D095953 4.8e-31 137.5 83 86.7
BcaB08g35016 Brassica carinata HOM05D001498 ORTHO05D092631 4.8e-31 137.5 83 86.7
BcaB06g26483 Brassica carinata HOM05D001498 ORTHO05D095599 3.1e-30 134.8 79 89.9
BcaB01g01309 Brassica carinata HOM05D001498 ORTHO05D091216 3.4e-29 131.3 73 93.2
BcaB03g16298 Brassica carinata HOM05D001498 ORTHO05D095831 1.4e-27 125.9 81 85.2
BcaB07g33754 Brassica carinata HOM05D001498 ORTHO05D092729 2.7e-26 121.7 68 94.1
C06p31050 Brassica napus HOM05D001498 ORTHO05D011506 1.9e-24 115.5 83 74.7
C01p48970 Brassica napus HOM05D001498 ORTHO05D011506 5.6e-24 114.0 83 74.7
C07p49110 Brassica napus HOM05D001498 ORTHO05D097837 5.6e-24 114.0 83 74.7
C09p16580 Brassica napus HOM05D001498 ORTHO05D011506 7.4e-24 113.6 83 73.5
BcaC07g38657 Brassica carinata HOM05D001498 ORTHO05D011506 9.6e-24 113.2 83 73.5
BolC2t11288H Brassica oleracea HOM05D001498 ORTHO05D011506 9.6e-24 113.2 83 73.5
C03p66370 Brassica napus HOM05D001498 ORTHO05D011506 1.3e-23 112.8 83 73.5
BolC1t03827H Brassica oleracea HOM05D001498 ORTHO05D011506 1.6e-23 112.5 83 73.5
BcaB07g32352 Brassica carinata HOM05D001498 ORTHO05D021639 2.8e-23 111.7 83 73.5
BcaC05g27519 Brassica carinata HOM05D001498 ORTHO05D011506 6.2e-23 110.5 83 72.3
BcaC08g44373 Brassica carinata HOM05D001498 ORTHO05D011506 6.2e-23 110.5 83 71.1
C09p17600 Brassica napus HOM05D001498 ORTHO05D011506 6.2e-23 110.5 82 73.2
A03p54380 Brassica napus HOM05D001498 ORTHO05D011506 8.2e-23 110.2 79 74.7
BcaC02g09114 Brassica carinata HOM05D001498 ORTHO05D011506 1.1e-22 109.8 83 72.3
C04p21380 Brassica napus HOM05D001498 ORTHO05D013028 1.4e-22 109.4 77 76.6
C09p27470 Brassica napus HOM05D001498 ORTHO05D011506 1.8e-22 109.0 83 71.1
BcaB03g15933 Brassica carinata HOM05D001498 ORTHO05D021639 2.4e-22 108.6 83 71.1
C02p53500 Brassica napus HOM05D001498 ORTHO05D001885 2.4e-22 108.6 77 75.3
BolC9t54653H Brassica oleracea HOM05D001498 ORTHO05D011506 2.4e-22 108.6 85 70.6
C02p52020 Brassica napus HOM05D001498 ORTHO05D011506 5.3e-22 107.5 77 75.3
C08p17880 Brassica napus HOM05D001498 ORTHO05D001885 5.3e-22 107.5 76 76.3
C01p44920 Brassica napus HOM05D001498 ORTHO05D011506 6.9e-22 107.1 85 69.4
C01p30520 Brassica napus HOM05D001498 ORTHO05D001885 9.0e-22 106.7 77 74.0
C01p38680 Brassica napus HOM05D001498 ORTHO05D011506 9.0e-22 106.7 77 75.3
BolC8t49067H Brassica oleracea HOM05D001498 ORTHO05D011506 9.0e-22 106.7 85 69.4
A08p07550 Brassica napus HOM05D001498 ORTHO05D011506 1.2e-21 106.3 83 69.9
BolC1t02817H Brassica oleracea HOM05D001498 ORTHO05D106172 1.2e-21 106.3 85 69.4
BraA03t15290Z Brassica rapa HOM05D001498 ORTHO05D011506 1.5e-21 105.9 73 76.7
A08p09540 Brassica napus HOM05D001498 ORTHO05D011506 2.0e-21 105.5 73 76.7
C03p56230 Brassica napus HOM05D001498 ORTHO05D001885 2.0e-21 105.5 82 69.5
A08p06060 Brassica napus HOM05D001498 ORTHO05D011506 4.5e-21 104.4 73 76.7
C04p36710 Brassica napus HOM05D001498 ORTHO05D001885 5.8e-21 104.0 77 72.7
BolC3t19484H Brassica oleracea HOM05D001498 ORTHO05D011506 5.8e-21 104.0 85 68.2
BcaB04g17703 Brassica carinata HOM05D001498 ORTHO05D021639 1.3e-20 102.8 85 68.2
BcaC08g44056 Brassica carinata HOM05D001498 ORTHO05D091470 1.3e-20 102.8 78 70.5
C01p30560 Brassica napus HOM05D001498 ORTHO05D011506 1.3e-20 102.8 73 76.7
BolC3t17911H Brassica oleracea HOM05D001498 ORTHO05D008559 1.3e-20 102.8 85 68.2
BcaC09g48967 Brassica carinata HOM05D001498 ORTHO05D011506 1.7e-20 102.4 73 75.3
BcaC04g20364 Brassica carinata HOM05D001498 ORTHO05D011506 2.9e-20 101.7 73 75.3
BcaB08g35076 Brassica carinata HOM05D001498 ORTHO05D021639 3.8e-20 101.3 73 75.3
BraA08t32774Z Brassica rapa HOM05D001498 ORTHO05D001885 4.9e-20 100.9 85 65.9
A01p28560 Brassica napus HOM05D001498 ORTHO05D021639 6.5e-20 100.5 69 76.8
BolC8t47367H Brassica oleracea HOM05D001498 ORTHO05D011506 6.5e-20 100.5 84 65.5
BcaB06g25736 Brassica carinata HOM05D001498 ORTHO05D021639 1.1e-19 99.8 73 74.0
BcaB06g26755 Brassica carinata HOM05D001498 ORTHO05D092466 1.1e-19 99.8 73 74.0
BcaB06g25739 Brassica carinata HOM05D001498 ORTHO05D093323 1.4e-19 99.4 73 74.0
BcaB04g18432 Brassica carinata HOM05D001498 ORTHO05D090882 1.9e-19 99.0 73 74.0
BcaB08g35461 Brassica carinata HOM05D001498 ORTHO05D090491 3.2e-19 98.2 73 72.6
BcaC04g19551 Brassica carinata HOM05D001498 ORTHO05D090991 1.3e-17 92.8 83 65.1
C09p21170 Brassica napus HOM05D001498 ORTHO05D011506 1.3e-17 92.8 73 69.9
BolC9t55019H Brassica oleracea HOM05D001498 ORTHO05D011506 1.3e-17 92.8 73 69.9
C03p66000 Brassica napus HOM05D001498 ORTHO05D001885 1.8e-17 92.4 71 71.8
BcaC09g50109 Brassica carinata HOM05D001498 ORTHO05D093510 3.0e-17 91.7 69 71.0
BcaC02g10287 Brassica carinata HOM05D001498 ORTHO05D093229 3.9e-17 91.3 82 64.6
BcaB01g01484 Brassica carinata HOM05D001498 ORTHO05D091615 2.5e-16 88.6 85 60.0
BcaB07g32913 Brassica carinata HOM05D001498 ORTHO05D091922 7.4e-16 87.0 85 58.8
BcaB03g16152 Brassica carinata HOM05D001498 ORTHO05D093112 1.6e-15 85.9 84 58.3
BcaC05g25872 Brassica carinata HOM05D001498 ORTHO05D011506 1.6e-15 85.9 84 57.1
BolC5t31266H Brassica oleracea HOM05D001498 ORTHO05D019959 2.8e-15 85.1 85 56.5
BcaB04g17776 Brassica carinata HOM05D001498 ORTHO05D092868 3.7e-15 84.7 83 57.8
BcaB05g23244 Brassica carinata HOM05D001498 ORTHO05D095601 3.7e-15 84.7 84 61.9
BcaB07g33084 Brassica carinata HOM05D001498 ORTHO05D092207 4.8e-15 84.3 85 61.2
BcaB07g33220 Brassica carinata HOM05D001498 ORTHO05D096371 6.3e-15 84.0 83 57.8
BcaB03g16194 Brassica carinata HOM05D001498 ORTHO05D091006 8.2e-15 83.6 47 93.6
BcaB07g32989 Brassica carinata HOM05D001498 ORTHO05D008559 8.2e-15 83.6 84 57.1
BcaB05g23120 Brassica carinata HOM05D001498 ORTHO05D090647 4.1e-14 81.3 85 55.3
BcaB07g33217 Brassica carinata HOM05D001498 ORTHO05D093085 6.9e-14 80.5 85 58.8
BcaB06g26727 Brassica carinata HOM05D001498 ORTHO05D093134 9.0e-14 80.1 85 58.8
BcaB06g27273 Brassica carinata HOM05D001498 ORTHO05D094467 1.5e-13 79.3 85 58.8
BcaC01g03078 Brassica carinata HOM05D001498 ORTHO05D008559 2.0e-13 79.0 80 65.0
BcaB06g27027 Brassica carinata HOM05D001498 ORTHO05D092574 2.6e-13 78.6 43 97.7
C09p42290 Brassica napus HOM05D001498 ORTHO05D016694 4.5e-13 77.8 81 54.3
BcaB01g01816 Brassica carinata HOM05D001498 ORTHO05D091844 5.9e-13 77.4 75 64.0
BcaB06g26473 Brassica carinata HOM05D001498 ORTHO05D091656 7.7e-13 77.0 55 76.4
BolC9t57107H Brassica oleracea HOM05D001498 ORTHO05D016694 1.3e-12 76.3 81 53.1
BcaB06g26478 Brassica carinata HOM05D001498 ORTHO05D092859 1.7e-12 75.9 46 89.1
BcaC02g11926 Brassica carinata HOM05D001498 ORTHO05D019959 1.7e-12 75.9 85 49.4
BcaC05g27663 Brassica carinata HOM05D001498 ORTHO05D090842 1.7e-12 75.9 72 54.2
BcaC06g35524 Brassica carinata HOM05D001498 ORTHO05D016694 2.2e-12 75.5 88 50.0
C04p20860 Brassica napus HOM05D001498 ORTHO05D016694 2.2e-12 75.5 88 51.1
BolC4t23616H Brassica oleracea HOM05D001498 ORTHO05D016694 2.2e-12 75.5 88 51.1
BcaC02g09776 Brassica carinata HOM05D001498 ORTHO05D016036 3.8e-12 74.7 48 85.4
BcaC06g36329 Brassica carinata HOM05D001498 ORTHO05D096194 6.5e-12 73.9 85 48.2
BcaB03g16497 Brassica carinata HOM05D001498 ORTHO05D008559 1.1e-11 73.2 52 78.8
BcaB05g22880 Brassica carinata HOM05D001498 ORTHO05D019959 1.1e-11 73.2 86 47.7
BcaC02g11068 Brassica carinata HOM05D001498 ORTHO05D016694 1.1e-11 73.2 88 50.0
BcaC03g13777 Brassica carinata HOM05D001498 ORTHO05D091916 1.1e-11 73.2 85 57.6
BcaB02g11279 Brassica carinata HOM05D001498 ORTHO05D095830 1.4e-11 72.8 85 50.6
BcaB03g16423 Brassica carinata HOM05D001498 ORTHO05D091575 3.2e-11 71.6 75 64.0
BcaC04g22591 Brassica carinata HOM05D001498 ORTHO05D095898 3.2e-11 71.6 48 81.2
BcaB07g33213 Brassica carinata HOM05D001498 ORTHO05D090837 7.2e-11 70.5 73 50.7
BcaB01g01371 Brassica carinata HOM05D001498 ORTHO05D091381 2.1e-10 68.9 73 49.3
BcaC03g14315 Brassica carinata HOM05D001498 ORTHO05D008559 2.7e-10 68.6 48 79.2
C05p25290 Brassica napus HOM05D001498 ORTHO05D019959 2.7e-10 68.6 67 59.7
BcaB02g10765 Brassica carinata HOM05D001498 ORTHO05D095468 6.1e-10 67.4 75 52.0
BcaB02g11277 Brassica carinata HOM05D001498 ORTHO05D091891 6.1e-10 67.4 92 46.7
BcaC04g20545 Brassica carinata HOM05D001498 ORTHO05D016694 1.8e-09 65.9 71 52.1
BcaC06g36688 Brassica carinata HOM05D001498 ORTHO05D001885 3.9e-09 64.7 80 48.8
BcaC04g20544 Brassica carinata HOM05D001498 ORTHO05D016694 5.1e-09 64.3 60 56.7
C07p06210 Brassica napus HOM05D001498 ORTHO05D032253 8.8e-09 63.5 58 60.3
BolC7t41038H Brassica oleracea HOM05D001498 ORTHO05D032253 8.8e-09 63.5 57 61.4
BcaC05g26789 Brassica carinata HOM05D001498 ORTHO05D094205 1.1e-08 63.2 52 71.2
BcaB02g11218 Brassica carinata HOM05D001224 ORTHO05D010571 7.4e-08 60.5 88 44.3
BcaB01g01185 Brassica carinata HOM05D001498 ORTHO05D019959 9.7e-08 60.1 72 45.8
BcaC06g36230 Brassica carinata HOM05D001498 ORTHO05D032253 9.7e-08 60.1 53 62.3
BcaB06g27205 Brassica carinata HOM05D001498 ORTHO05D091204 6.3e-07 57.4 75 44.0
BcaB05g24509 Brassica carinata HOM05D001379 ORTHO05D001277 1.1e-06 56.6 62 50.0
BcaB02g11227 Brassica carinata HOM05D001498 ORTHO05D093168 4.1e-06 54.7 40 75.0
C04p09850 Brassica napus HOM05D001498 ORTHO05D101798 5.3e-06 54.3 52 55.8
C07p38510 Brassica napus HOM05D001498 ORTHO05D100413 6.9e-06 53.9 39 66.7
BcaB06g26678 Brassica carinata HOM05D001498 ORTHO05D094527 9.1e-06 53.5 53 58.5


User provided reference genes

Program Settings