Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g23245 Brassica carinata HOM05D008414 ORTHO05D095473 2.1e-125 452.6 272 100.0
BcaB02g11314 Brassica carinata HOM05D008414 ORTHO05D094225 9.0e-116 420.6 272 91.9
BcaB07g33316 Brassica carinata HOM05D008414 ORTHO05D092176 5.1e-111 404.8 272 86.0
BcaB06g26481 Brassica carinata HOM05D008414 ORTHO05D094346 2.8e-109 399.1 279 88.5
BcaB06g26761 Brassica carinata HOM05D008414 ORTHO05D091670 2.5e-81 306.2 170 94.7
BcaB04g18489 Brassica carinata HOM05D008414 ORTHO05D092295 1.2e-80 303.9 272 76.1
BcaB06g27026 Brassica carinata HOM05D008414 ORTHO05D090558 2.1e-80 303.1 237 81.4
BcaB03g16287 Brassica carinata HOM05D008414 ORTHO05D094276 9.4e-73 277.7 229 82.1
BcaB07g33085 Brassica carinata HOM05D001498 ORTHO05D095625 1.0e-63 247.7 284 54.9
BcaB06g26479 Brassica carinata HOM05D008414 ORTHO05D014108 9.9e-30 134.8 74 93.2
BcaB07g33218 Brassica carinata HOM05D008414 ORTHO05D014108 2.9e-29 133.3 74 93.2
BolC4t23821H Brassica oleracea HOM05D008414 ORTHO05D014108 1.1e-23 114.8 168 45.8
C04p09830 Brassica napus HOM05D008414 ORTHO05D014108 2.6e-22 110.2 104 60.6
BcaC04g20543 Brassica carinata HOM05D008414 ORTHO05D014108 5.8e-22 109.0 171 48.0
C09p42300 Brassica napus HOM05D008414 ORTHO05D014108 5.8e-22 109.0 171 48.5
C02p39460 Brassica napus HOM05D008414 ORTHO05D014108 4.2e-20 102.8 167 46.1
C03p66100 Brassica napus HOM05D008414 ORTHO05D003542 4.2e-20 102.8 109 52.3
BcaB03g16772 Brassica carinata HOM05D008414 ORTHO05D014108 1.2e-19 101.3 102 58.8
C09p45510 Brassica napus HOM05D008414 ORTHO05D032461 1.2e-19 101.3 119 52.9
BolC3t18883H Brassica oleracea HOM05D008414 ORTHO05D039896 1.2e-19 101.3 166 46.4
C03p69240 Brassica napus HOM05D008414 ORTHO05D008559 2.1e-19 100.5 78 64.1
BolC3t19181H Brassica oleracea HOM05D008414 ORTHO05D008559 2.1e-19 100.5 78 64.1
BcaC04g20282 Brassica carinata HOM05D008414 ORTHO05D032461 2.7e-19 100.1 119 52.1
BcaC06g35525 Brassica carinata HOM05D008414 ORTHO05D014108 2.7e-19 100.1 171 44.4
C07p13930 Brassica napus HOM05D008414 ORTHO05D014108 6.0e-19 99.0 171 44.4
BcaC06g35065 Brassica carinata HOM05D008414 ORTHO05D014108 1.0e-18 98.2 172 43.6
BolC7t41775H Brassica oleracea HOM05D008414 ORTHO05D032311 1.0e-18 98.2 103 52.4
BolC9t57420H Brassica oleracea HOM05D008414 ORTHO05D032461 1.0e-18 98.2 119 52.9
BcaC06g35619 Brassica carinata HOM05D008414 ORTHO05D032311 3.0e-18 96.7 103 51.5
C07p12910 Brassica napus HOM05D008414 ORTHO05D032311 3.0e-18 96.7 103 51.5
BolC7t41040H Brassica oleracea HOM05D008414 ORTHO05D014108 5.1e-18 95.9 68 66.2
BraSC37t46119Z Brassica rapa HOM05D008414 ORTHO05D022023 1.1e-17 94.7 105 58.1
BcaC06g36228 Brassica carinata HOM05D001498 ORTHO05D008559 1.9e-17 94.0 68 64.7
BolC7t40818H Brassica oleracea HOM05D008414 ORTHO05D032445 1.6e-16 90.9 168 36.3
C07p06230 Brassica napus HOM05D008414 ORTHO05D014108 4.8e-16 89.4 98 51.0
C07p04240 Brassica napus HOM05D008414 ORTHO05D032445 3.1e-15 86.7 168 35.7
BraA01t02473Z Brassica rapa HOM05D008414 ORTHO05D022023 3.1e-15 86.7 180 43.3
BcaB03g16193 Brassica carinata HOM05D001498 ORTHO05D092429 4.0e-15 86.3 106 50.9
BcaNung05285 Brassica carinata HOM05D008414 ORTHO05D014108 5.3e-15 85.9 44 95.5
BcaC06g35693 Brassica carinata HOM05D001498 ORTHO05D008559 9.9e-14 81.6 101 53.5
C01p34340 Brassica napus HOM05D008414 ORTHO05D040375 2.2e-13 80.5 137 42.3
BolC1t03404H Brassica oleracea HOM05D008414 ORTHO05D040375 2.2e-13 80.5 137 42.3
BcaB03g16624 Brassica carinata HOM05D008414 ORTHO05D095320 6.4e-13 79.0 242 30.2
BcaB02g11224 Brassica carinata HOM05D008414 ORTHO05D096114 1.2e-11 74.7 56 73.2
BcaB05g23794 Brassica carinata HOM05D001498 ORTHO05D008559 2.3e-10 70.5 72 51.4
BolC2t09959H Brassica oleracea HOM05D008414 ORTHO05D033195 5.1e-10 69.3 48 64.6
BcaB02g10766 Brassica carinata HOM05D008414 ORTHO05D014108 6.7e-10 68.9 157 40.1
BcaC09g48601 Brassica carinata HOM05D001498 ORTHO05D008559 1.9e-09 67.4 178 34.3
BcaC01g02360 Brassica carinata HOM05D008414 ORTHO05D039896 3.3e-09 66.6 134 44.0
BolC9t57108H Brassica oleracea HOM05D008414 ORTHO05D033115 7.4e-09 65.5 87 44.8
C07p05320 Brassica napus HOM05D008414 ORTHO05D033195 3.7e-08 63.2 85 48.2
BolC7t40932H Brassica oleracea HOM05D008414 ORTHO05D033195 3.7e-08 63.2 85 48.2
C05p45420 Brassica napus HOM05D008414 ORTHO05D022023 6.2e-08 62.4 149 41.6
C07p06910 Brassica napus HOM05D008414 ORTHO05D022023 8.1e-08 62.0 151 43.0
A08p08860 Brassica napus HOM05D008414 ORTHO05D022023 1.1e-07 61.6 151 43.0
BolC5t31266H Brassica oleracea HOM05D001498 ORTHO05D019959 1.4e-07 61.2 99 38.4
BcaC09g48840 Brassica carinata HOM05D001498 ORTHO05D008559 2.4e-07 60.5 170 40.6
BcaB01g01185 Brassica carinata HOM05D001498 ORTHO05D019959 4.0e-07 59.7 97 39.2
BcaC01g02039 Brassica carinata HOM05D008414 ORTHO05D008559 5.3e-07 59.3 47 66.0
BcaC06g36431 Brassica carinata HOM05D008414 ORTHO05D032445 5.3e-07 59.3 137 32.8
BcaB07g33140 Brassica carinata HOM05D015118 ORTHO05D019993 2.0e-06 57.4 158 31.0
C04p05490 Brassica napus HOM05D008414 ORTHO05D022023 2.0e-06 57.4 77 54.5
A10p08830 Brassica napus HOM05D001379 ORTHO05D001277 2.6e-06 57.0 149 40.9
BcaB06g27015 Brassica carinata HOM05D015118 ORTHO05D091520 7.6e-06 55.5 65 44.6
BcaC02g11926 Brassica carinata HOM05D001498 ORTHO05D019959 7.6e-06 55.5 102 37.3
C01p38760 Brassica napus HOM05D008414 ORTHO05D033115 1.0e-05 55.1 62 45.2
BolC1t03833H Brassica oleracea HOM05D008414 ORTHO05D033115 1.0e-05 55.1 62 45.2


User provided reference genes

Program Settings