Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g23244 Brassica carinata HOM05D001498 ORTHO05D095601 7.8e-59 230.7 161 100.0
BcaB06g27273 Brassica carinata HOM05D001498 ORTHO05D094467 2.1e-51 206.1 161 77.0
BcaB01g01816 Brassica carinata HOM05D001498 ORTHO05D091844 1.8e-47 193.0 152 76.3
BcaB06g26727 Brassica carinata HOM05D001498 ORTHO05D093134 3.4e-46 188.7 161 73.3
BcaB07g33217 Brassica carinata HOM05D001498 ORTHO05D093085 4.2e-44 181.8 162 78.4
BcaB07g33084 Brassica carinata HOM05D001498 ORTHO05D092207 7.4e-41 171.0 156 69.9
BcaC05g26789 Brassica carinata HOM05D001498 ORTHO05D094205 8.2e-32 141.0 130 73.1
BcaB06g26480 Brassica carinata HOM05D001498 ORTHO05D094428 9.7e-25 117.5 161 58.4
BcaB04g17776 Brassica carinata HOM05D001498 ORTHO05D092868 4.1e-23 112.1 181 43.6
BcaB07g33317 Brassica carinata HOM05D001498 ORTHO05D096108 1.2e-22 110.5 152 61.8
BolC5t31266H Brassica oleracea HOM05D001498 ORTHO05D019959 2.5e-20 102.8 82 64.6
BcaB07g33220 Brassica carinata HOM05D001498 ORTHO05D096371 5.5e-20 101.7 85 64.7
BcaB03g16152 Brassica carinata HOM05D001498 ORTHO05D093112 1.6e-19 100.1 94 61.7
BcaB01g01484 Brassica carinata HOM05D001498 ORTHO05D091615 3.6e-19 99.0 94 60.6
BcaB07g32913 Brassica carinata HOM05D001498 ORTHO05D091922 7.9e-19 97.8 84 64.3
BcaC02g11926 Brassica carinata HOM05D001498 ORTHO05D019959 7.9e-19 97.8 82 59.8
BcaB07g32989 Brassica carinata HOM05D001498 ORTHO05D008559 1.4e-18 97.1 90 61.1
BcaB05g23120 Brassica carinata HOM05D001498 ORTHO05D090647 6.7e-18 94.7 84 61.9
BcaB03g16286 Brassica carinata HOM05D001498 ORTHO05D093797 2.6e-17 92.8 161 51.6
BcaB05g22943 Brassica carinata HOM05D001498 ORTHO05D096110 7.4e-17 91.3 84 64.3
C09p16580 Brassica napus HOM05D001498 ORTHO05D011506 1.3e-16 90.5 163 41.7
BolC2t11288H Brassica oleracea HOM05D001498 ORTHO05D011506 1.3e-16 90.5 163 42.3
BcaB04g17678 Brassica carinata HOM05D001498 ORTHO05D094760 2.2e-16 89.7 84 63.1
C01p48970 Brassica napus HOM05D001498 ORTHO05D011506 2.2e-16 89.7 84 64.3
C07p49110 Brassica napus HOM05D001498 ORTHO05D097837 2.8e-16 89.4 163 41.7
BcaB04g18314 Brassica carinata HOM05D001498 ORTHO05D095953 3.7e-16 89.0 82 62.2
BcaB05g23246 Brassica carinata HOM05D001498 ORTHO05D090900 3.7e-16 89.0 84 61.9
BolC1t03827H Brassica oleracea HOM05D001498 ORTHO05D011506 4.8e-16 88.6 94 60.6
BcaB01g01309 Brassica carinata HOM05D001498 ORTHO05D091216 6.3e-16 88.2 147 60.5
BcaB01g03187 Brassica carinata HOM05D001498 ORTHO05D090608 8.2e-16 87.8 84 63.1
BcaC07g38657 Brassica carinata HOM05D001498 ORTHO05D011506 8.2e-16 87.8 94 59.6
BcaB02g11279 Brassica carinata HOM05D001498 ORTHO05D095830 1.1e-15 87.4 94 54.3
BcaB07g33315 Brassica carinata HOM05D001498 ORTHO05D091495 1.1e-15 87.4 82 62.2
BcaB05g23077 Brassica carinata HOM05D001498 ORTHO05D091436 1.8e-15 86.7 84 61.9
BcaC02g09114 Brassica carinata HOM05D001498 ORTHO05D011506 1.8e-15 86.7 84 61.9
A08p07550 Brassica napus HOM05D001498 ORTHO05D011506 1.8e-15 86.7 163 41.1
C01p30560 Brassica napus HOM05D001498 ORTHO05D011506 1.8e-15 86.7 140 45.7
C03p66370 Brassica napus HOM05D001498 ORTHO05D011506 1.8e-15 86.7 84 63.1
C06p31050 Brassica napus HOM05D001498 ORTHO05D011506 1.8e-15 86.7 94 59.6
C09p27470 Brassica napus HOM05D001498 ORTHO05D011506 1.8e-15 86.7 87 60.9
BcaC08g44056 Brassica carinata HOM05D001498 ORTHO05D091470 4.1e-15 85.5 143 44.1
BcaC08g44373 Brassica carinata HOM05D001498 ORTHO05D011506 4.1e-15 85.5 82 62.2
A03p54380 Brassica napus HOM05D001498 ORTHO05D011506 4.1e-15 85.5 159 40.3
C04p21380 Brassica napus HOM05D001498 ORTHO05D013028 4.1e-15 85.5 157 42.0
BolC9t57107H Brassica oleracea HOM05D001498 ORTHO05D016694 5.3e-15 85.1 82 59.8
BcaB01g01185 Brassica carinata HOM05D001498 ORTHO05D019959 6.9e-15 84.7 82 53.7
C01p38680 Brassica napus HOM05D001498 ORTHO05D011506 6.9e-15 84.7 157 42.0
C02p52020 Brassica napus HOM05D001498 ORTHO05D011506 6.9e-15 84.7 159 41.5
C02p53500 Brassica napus HOM05D001498 ORTHO05D001885 6.9e-15 84.7 157 41.4
C03p56230 Brassica napus HOM05D001498 ORTHO05D001885 6.9e-15 84.7 159 41.5
C09p17600 Brassica napus HOM05D001498 ORTHO05D011506 1.2e-14 84.0 80 65.0
C09p42290 Brassica napus HOM05D001498 ORTHO05D016694 1.2e-14 84.0 82 59.8
C08p17880 Brassica napus HOM05D001498 ORTHO05D001885 1.5e-14 83.6 156 41.7
A08p09540 Brassica napus HOM05D001498 ORTHO05D011506 2.0e-14 83.2 154 42.2
BcaC05g27519 Brassica carinata HOM05D001498 ORTHO05D011506 2.6e-14 82.8 84 60.7
BcaC06g36329 Brassica carinata HOM05D001498 ORTHO05D096194 2.6e-14 82.8 94 53.2
C01p44920 Brassica napus HOM05D001498 ORTHO05D011506 2.6e-14 82.8 156 41.0
BcaC04g19551 Brassica carinata HOM05D001498 ORTHO05D090991 3.4e-14 82.4 72 65.3
BolC4t23616H Brassica oleracea HOM05D001498 ORTHO05D016694 5.9e-14 81.6 77 61.0
C04p20860 Brassica napus HOM05D001498 ORTHO05D016694 7.7e-14 81.3 75 62.7
BolC3t19484H Brassica oleracea HOM05D001498 ORTHO05D011506 7.7e-14 81.3 87 60.9
BolC9t54653H Brassica oleracea HOM05D001498 ORTHO05D011506 7.7e-14 81.3 77 64.9
BcaB07g33085 Brassica carinata HOM05D001498 ORTHO05D095625 1.0e-13 80.9 84 57.1
C01p30520 Brassica napus HOM05D001498 ORTHO05D001885 1.0e-13 80.9 88 59.1
BcaB08g35016 Brassica carinata HOM05D001498 ORTHO05D092631 1.3e-13 80.5 84 58.3
BcaC05g27663 Brassica carinata HOM05D001498 ORTHO05D090842 1.3e-13 80.5 77 58.4
BcaB06g26483 Brassica carinata HOM05D001498 ORTHO05D095599 1.7e-13 80.1 82 57.3
A01p28560 Brassica napus HOM05D001498 ORTHO05D021639 1.7e-13 80.1 73 67.1
BolC8t49067H Brassica oleracea HOM05D001498 ORTHO05D011506 1.7e-13 80.1 87 59.8
BcaB07g32352 Brassica carinata HOM05D001498 ORTHO05D021639 2.2e-13 79.7 84 58.3
A08p06060 Brassica napus HOM05D001498 ORTHO05D011506 2.2e-13 79.7 75 66.7
BolC1t02817H Brassica oleracea HOM05D001498 ORTHO05D106172 2.2e-13 79.7 87 59.8
BolC3t17911H Brassica oleracea HOM05D001498 ORTHO05D008559 2.2e-13 79.7 156 39.7
BraA08t32774Z Brassica rapa HOM05D001498 ORTHO05D001885 2.2e-13 79.7 156 40.4
BcaC06g35524 Brassica carinata HOM05D001498 ORTHO05D016694 2.9e-13 79.3 94 51.1
BcaB07g33213 Brassica carinata HOM05D001498 ORTHO05D090837 5.0e-13 78.6 76 53.9
BcaC09g48967 Brassica carinata HOM05D001498 ORTHO05D011506 5.0e-13 78.6 85 60.0
BcaC02g11068 Brassica carinata HOM05D001498 ORTHO05D016694 6.5e-13 78.2 77 58.4
BcaC09g50109 Brassica carinata HOM05D001498 ORTHO05D093510 6.5e-13 78.2 70 64.3
BcaC04g20364 Brassica carinata HOM05D001498 ORTHO05D011506 8.5e-13 77.8 85 60.0
C04p36710 Brassica napus HOM05D001498 ORTHO05D001885 8.5e-13 77.8 78 61.5
BcaB01g01371 Brassica carinata HOM05D001498 ORTHO05D091381 1.4e-12 77.0 76 52.6
BcaB02g11277 Brassica carinata HOM05D001498 ORTHO05D091891 1.4e-12 77.0 94 52.1
BcaB03g15933 Brassica carinata HOM05D001498 ORTHO05D021639 1.9e-12 76.6 84 56.0
BcaB06g27205 Brassica carinata HOM05D001498 ORTHO05D091204 1.9e-12 76.6 73 54.8
C03p66000 Brassica napus HOM05D001498 ORTHO05D001885 1.9e-12 76.6 75 62.7
BolC8t47367H Brassica oleracea HOM05D001498 ORTHO05D011506 1.9e-12 76.6 87 57.5
BcaB07g33754 Brassica carinata HOM05D001498 ORTHO05D092729 3.2e-12 75.9 69 62.3
BcaB03g16298 Brassica carinata HOM05D001498 ORTHO05D095831 5.5e-12 75.1 91 52.7
BcaB04g17703 Brassica carinata HOM05D001498 ORTHO05D021639 5.5e-12 75.1 94 52.1
BcaB05g22880 Brassica carinata HOM05D001498 ORTHO05D019959 5.5e-12 75.1 76 52.6
BcaB02g10765 Brassica carinata HOM05D001498 ORTHO05D095468 7.2e-12 74.7 73 58.9
C05p25290 Brassica napus HOM05D001498 ORTHO05D019959 7.2e-12 74.7 64 64.1
BraA03t15290Z Brassica rapa HOM05D001498 ORTHO05D011506 7.2e-12 74.7 154 37.7
BcaC04g20545 Brassica carinata HOM05D001498 ORTHO05D016694 1.6e-11 73.6 73 58.9
C09p21170 Brassica napus HOM05D001498 ORTHO05D011506 2.1e-11 73.2 154 38.3
BcaC02g10287 Brassica carinata HOM05D001498 ORTHO05D093229 3.6e-11 72.4 83 54.2
BolC7t41038H Brassica oleracea HOM05D001498 ORTHO05D032253 3.6e-11 72.4 55 65.5
BcaC05g25872 Brassica carinata HOM05D001498 ORTHO05D011506 4.7e-11 72.0 65 61.5
BolC9t55019H Brassica oleracea HOM05D001498 ORTHO05D011506 6.1e-11 71.6 154 37.7
BcaB08g35076 Brassica carinata HOM05D001498 ORTHO05D021639 1.4e-10 70.5 75 58.7
BcaB02g11218 Brassica carinata HOM05D001224 ORTHO05D010571 1.8e-10 70.1 78 48.7
BcaB06g25736 Brassica carinata HOM05D001498 ORTHO05D021639 1.8e-10 70.1 75 58.7
C07p06210 Brassica napus HOM05D001498 ORTHO05D032253 2.3e-10 69.7 55 63.6
BcaB04g17490 Brassica carinata HOM05D001498 ORTHO05D019959 3.9e-10 68.9 73 50.7
BcaB06g26755 Brassica carinata HOM05D001498 ORTHO05D092466 3.9e-10 68.9 75 57.3
BcaB06g25739 Brassica carinata HOM05D001498 ORTHO05D093323 5.2e-10 68.6 75 57.3
BcaB04g18432 Brassica carinata HOM05D001498 ORTHO05D090882 6.7e-10 68.2 75 57.3
BcaB08g35461 Brassica carinata HOM05D001498 ORTHO05D090491 6.7e-10 68.2 73 57.5
BcaC06g36230 Brassica carinata HOM05D001498 ORTHO05D032253 3.3e-09 65.9 50 66.0
BcaC04g20544 Brassica carinata HOM05D001498 ORTHO05D016694 5.7e-09 65.1 62 62.9
BcaB02g11227 Brassica carinata HOM05D001498 ORTHO05D093168 1.7e-08 63.5 43 79.1
BcaC01g03078 Brassica carinata HOM05D001498 ORTHO05D008559 1.7e-08 63.5 71 59.2
C04p09850 Brassica napus HOM05D001498 ORTHO05D101798 2.2e-08 63.2 51 58.8
BcaB03g16194 Brassica carinata HOM05D001498 ORTHO05D091006 3.7e-08 62.4 48 72.9
BcaB07g33140 Brassica carinata HOM05D015118 ORTHO05D019993 4.8e-08 62.0 134 35.8
BcaC03g13777 Brassica carinata HOM05D001498 ORTHO05D091916 8.2e-08 61.2 84 46.4
BcaB06g27027 Brassica carinata HOM05D001498 ORTHO05D092574 1.4e-07 60.5 44 77.3
BcaB06g26473 Brassica carinata HOM05D001498 ORTHO05D091656 1.8e-07 60.1 54 64.8
BcaC02g09776 Brassica carinata HOM05D001498 ORTHO05D016036 1.8e-07 60.1 48 72.9
BcaB05g24509 Brassica carinata HOM05D001379 ORTHO05D001277 3.1e-07 59.3 64 51.6
BcaB06g26478 Brassica carinata HOM05D001498 ORTHO05D092859 7.0e-07 58.2 48 70.8
BcaC03g14315 Brassica carinata HOM05D001498 ORTHO05D008559 2.6e-06 56.2 82 47.6
C07p13940 Brassica napus HOM05D001379 ORTHO05D001277 2.6e-06 56.2 56 51.8
BcaB03g16497 Brassica carinata HOM05D001498 ORTHO05D008559 3.5e-06 55.8 41 78.0
BcaC04g22591 Brassica carinata HOM05D001498 ORTHO05D095898 3.5e-06 55.8 48 66.7


User provided reference genes

Program Settings