Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g23214 Brassica carinata HOM05D009080 ORTHO05D011297 1.7e-67 259.2 135 100.0
BcaC03g16333 Brassica carinata HOM05D009080 ORTHO05D011297 1.6e-41 172.9 115 80.0
C02p41520 Brassica napus HOM05D009080 ORTHO05D011297 1.6e-41 172.9 115 80.0
BolC2t10169H Brassica oleracea HOM05D009080 ORTHO05D011297 1.6e-41 172.9 115 80.0
A02p26020 Brassica napus HOM05D009080 ORTHO05D011297 8.1e-41 170.6 115 79.1
BraA02t07601Z Brassica rapa HOM05D009080 ORTHO05D011297 8.1e-41 170.6 115 79.1
BcaB05g23811 Brassica carinata HOM05D009080 ORTHO05D011297 2.3e-40 169.1 115 78.3
A01p24170 Brassica napus HOM05D009080 ORTHO05D011297 1.3e-38 163.3 115 79.1
BraA01t02329Z Brassica rapa HOM05D009080 ORTHO05D011297 1.3e-38 163.3 115 79.1
Sp5g11800 Schrenkiella parvula HOM05D009080 ORTHO05D011297 1.3e-38 163.3 114 72.8
Thhalv10010935m.g Eutrema salsugineum HOM05D009080 ORTHO05D011297 3.8e-38 161.8 129 64.3
C01p29880 Brassica napus HOM05D009080 ORTHO05D011297 4.1e-37 158.3 105 82.9
BolC1t02929H Brassica oleracea HOM05D009080 ORTHO05D011297 4.1e-37 158.3 105 82.9
Thhalv10024033m.g Eutrema salsugineum HOM05D009080 ORTHO05D011297 2.3e-35 152.5 114 70.2
Thhalv10005513m.g Eutrema salsugineum HOM05D009080 ORTHO05D011297 4.7e-33 144.8 109 68.8
A09p43380 Brassica napus HOM05D009080 ORTHO05D011297 1.1e-32 143.7 105 72.4
BraA09t39807Z Brassica rapa HOM05D009080 ORTHO05D011297 6.9e-32 141.0 104 72.1
BcaC07g39498 Brassica carinata HOM05D009080 ORTHO05D011297 2.6e-31 139.0 107 70.1
C08p25430 Brassica napus HOM05D009080 ORTHO05D011297 2.6e-31 139.0 107 70.1
BolC8t50165H Brassica oleracea HOM05D009080 ORTHO05D011297 2.6e-31 139.0 107 70.1
AT5G51360 Arabidopsis thaliana HOM05D009080 ORTHO05D011297 2.9e-30 135.6 114 65.8
BcaC09g50024 Brassica carinata HOM05D009080 ORTHO05D011297 2.4e-29 132.5 105 73.3
CARHR159870 Cardamine hirsuta HOM05D009080 ORTHO05D011297 3.3e-26 122.1 109 59.6
CARHR036770 Cardamine hirsuta HOM05D009080 ORTHO05D011297 4.3e-26 121.7 106 57.5
CARHR159860 Cardamine hirsuta HOM05D009080 ORTHO05D011297 8.1e-25 117.5 109 57.8
CARHR288020 Cardamine hirsuta HOM05D009080 ORTHO05D011297 8.1e-25 117.5 99 59.6
Aa31LG4G18610 Aethionema arabicum HOM05D009080 ORTHO05D011297 1.1e-21 107.1 110 52.7
AT3G50373 Arabidopsis thaliana HOM05D009080 ORTHO05D011297 2.1e-20 102.8 86 62.8
Carub.0005s1669 Capsella rubella HOM05D009080 ORTHO05D011297 5.1e-19 98.2 83 59.0
BcaB01g00619 Brassica carinata HOM05D009080 ORTHO05D011297 6.7e-19 97.8 90 63.3
THA.LOC104799721 Tarenaya hassleriana HOM05D009080 ORTHO05D011297 7.4e-18 94.4 113 52.2
THA.LOC109116046 Tarenaya hassleriana HOM05D009080 ORTHO05D011297 2.8e-17 92.4 113 47.8
CARHR285970 Cardamine hirsuta HOM05D009080 ORTHO05D011297 2.2e-14 82.8 107 46.7
THA.LOC104822185 Tarenaya hassleriana HOM05D009080 ORTHO05D011297 5.6e-10 68.2 94 41.5


User provided reference genes

Program Settings