Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g23206 Brassica carinata HOM05D026247 ORTHO05D032755 2.9e-35 151.4 77 100.0
BcaC09g50717 Brassica carinata HOM05D002854 ORTHO05D003051 1.1e-23 112.8 76 78.9
Sp7g24460 Schrenkiella parvula HOM05D002854 ORTHO05D003051 7.4e-23 110.2 76 80.3
C01p22490 Brassica napus HOM05D002854 ORTHO05D003051 9.6e-23 109.8 76 77.6
BolC1t02180H Brassica oleracea HOM05D002854 ORTHO05D003051 9.6e-23 109.8 76 77.6
A01p17770 Brassica napus HOM05D002854 ORTHO05D003051 3.7e-22 107.8 76 77.6
BcaNung02408 Brassica carinata HOM05D002854 ORTHO05D003051 6.3e-22 107.1 72 80.6
Thhalv10027252m.g Eutrema salsugineum HOM05D002854 ORTHO05D003051 2.6e-20 101.7 76 75.0
C02p09540 Brassica napus HOM05D026247 ORTHO05D032755 5.5e-18 94.0 74 70.3
CARHR234090 Cardamine hirsuta HOM05D002854 ORTHO05D003051 5.5e-18 94.0 81 66.7
AL7G26420 Arabidopsis lyrata HOM05D002854 ORTHO05D003051 1.6e-17 92.4 81 64.2
C03p59120 Brassica napus HOM05D026247 ORTHO05D032755 3.6e-17 91.3 70 72.9
AT4G26500 Arabidopsis thaliana HOM05D002854 ORTHO05D003051 7.9e-17 90.1 81 64.2
C09p31270 Brassica napus HOM05D026247 ORTHO05D096624 7.9e-17 90.1 69 72.5
Aa31LG5G11870 Aethionema arabicum HOM05D002854 ORTHO05D003051 5.7e-15 84.0 81 63.0
Carub.0007s1438 Capsella rubella HOM05D002854 ORTHO05D003051 9.1e-13 76.6 79 59.5
THA.LOC104817723 Tarenaya hassleriana HOM05D002854 ORTHO05D003051 2.1e-09 65.5 79 54.4
THA.LOC104813459 Tarenaya hassleriana HOM05D002854 ORTHO05D003051 1.0e-08 63.2 78 55.1


User provided reference genes

Program Settings