Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g23202 Brassica carinata HOM05D007948 ORTHO05D006374 5.3e-46 187.6 112 100.0
BcaC02g09365 Brassica carinata HOM05D007948 ORTHO05D006374 2.1e-34 149.1 106 84.9
BolC4t25756H Brassica oleracea HOM05D007948 ORTHO05D006374 7.9e-34 147.1 103 85.4
BolC9t57184H Brassica oleracea HOM05D007948 ORTHO05D006374 6.7e-33 144.1 105 83.8
BcaB07g33047 Brassica carinata HOM05D007948 ORTHO05D006374 3.4e-29 131.7 93 88.2
BcaC03g16243 Brassica carinata HOM05D007948 ORTHO05D006374 6.5e-28 127.5 106 74.5
BolC6t38712H Brassica oleracea HOM05D007948 ORTHO05D006374 1.8e-25 119.4 105 75.2
BcaB02g11411 Brassica carinata HOM05D007948 ORTHO05D006374 1.5e-24 116.3 105 67.6
BcaC03g17091 Brassica carinata HOM05D007948 ORTHO05D006374 3.3e-24 115.2 104 65.4
BcaC03g15931 Brassica carinata HOM05D007948 ORTHO05D006374 1.7e-23 112.8 84 67.9
BcaB07g32591 Brassica carinata HOM05D007948 ORTHO05D006374 1.7e-15 86.3 92 68.5
BcaB04g17715 Brassica carinata HOM05D007948 ORTHO05D006374 1.8e-14 82.8 109 47.7
BcaC03g14749 Brassica carinata HOM05D007948 ORTHO05D006374 5.3e-14 81.3 104 50.0
BcaC08g43811 Brassica carinata HOM05D007948 ORTHO05D006374 5.0e-12 74.7 78 67.9
BraA01t03624Z Brassica rapa HOM05D007948 ORTHO05D006374 5.0e-12 74.7 51 70.6
BcaC06g36333 Brassica carinata HOM05D007948 ORTHO05D006374 1.8e-09 66.2 104 35.6
BcaC01g02006 Brassica carinata HOM05D007948 ORTHO05D006374 7.5e-08 60.8 101 31.7
BcaC02g08352 Brassica carinata HOM05D007948 ORTHO05D006374 1.7e-07 59.7 115 38.3
BcaB04g17045 Brassica carinata HOM05D007948 ORTHO05D006374 6.3e-07 57.8 112 38.4
BolC2t10322H Brassica oleracea HOM05D007948 ORTHO05D006374 8.3e-07 57.4 115 35.7
BcaC02g10476 Brassica carinata HOM05D000779 ORTHO05D000246 3.1e-06 55.5 56 42.9
BcaC03g16472 Brassica carinata HOM05D007948 ORTHO05D006374 9.1e-06 53.9 57 38.6
SpUn0007_0160 Schrenkiella parvula HOM05D007948 ORTHO05D006374 9.1e-06 53.9 78 42.3


User provided reference genes

Program Settings