Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g23193 Brassica carinata HOM05D000313 ORTHO05D000065 2.2e-94 349.0 179 100.0
BcaB04g17117 Brassica carinata HOM05D000313 ORTHO05D000065 1.3e-14 84.0 57 75.4
BcaB04g17856 Brassica carinata HOM05D000313 ORTHO05D000065 8.5e-14 81.3 62 69.4
BolC6t36221H Brassica oleracea HOM05D000313 ORTHO05D000065 8.5e-14 81.3 56 73.2
A03p61810 Brassica napus HOM05D000313 ORTHO05D000065 5.5e-13 78.6 57 68.4
BcaC06g35487 Brassica carinata HOM05D000313 ORTHO05D000065 7.2e-13 78.2 56 69.6
C03p79730 Brassica napus HOM05D000313 ORTHO05D000065 9.4e-13 77.8 71 57.7
BolC3t16353H Brassica oleracea HOM05D000313 ORTHO05D000065 9.4e-13 77.8 71 57.7
C02p40980 Brassica napus HOM05D000313 ORTHO05D000065 1.6e-12 77.0 71 56.3
C08p27740 Brassica napus HOM05D000313 ORTHO05D000065 1.6e-12 77.0 56 71.4
C04p18340 Brassica napus HOM05D000313 ORTHO05D000065 2.1e-12 76.6 71 56.3
C07p15520 Brassica napus HOM05D000313 ORTHO05D000065 2.1e-12 76.6 56 67.9
BolC3t21647H Brassica oleracea HOM05D000313 ORTHO05D000065 2.1e-12 76.6 56 67.9
BcaB02g10989 Brassica carinata HOM05D000313 ORTHO05D000065 2.7e-12 76.3 57 70.2
BcaC06g36731 Brassica carinata HOM05D000313 ORTHO05D000065 2.7e-12 76.3 71 56.3
BolC7t40506H Brassica oleracea HOM05D000313 ORTHO05D000065 2.7e-12 76.3 71 56.3
A09p22770 Brassica napus HOM05D000313 ORTHO05D000065 3.6e-12 75.9 74 55.4
A09p23680 Brassica napus HOM05D000313 ORTHO05D000065 3.6e-12 75.9 56 67.9
A09p47000 Brassica napus HOM05D000313 ORTHO05D000065 3.6e-12 75.9 56 67.9
BraA09t40166Z Brassica rapa HOM05D000313 ORTHO05D000065 3.6e-12 75.9 56 67.9
BraA05t20559Z Brassica rapa HOM05D000313 ORTHO05D000065 4.7e-12 75.5 57 68.4
BolC7t42040H Brassica oleracea HOM05D000313 ORTHO05D000065 8.0e-12 74.7 56 66.1
BcaC06g36665 Brassica carinata HOM05D000313 ORTHO05D000065 1.0e-11 74.3 71 54.9
C04p21440 Brassica napus HOM05D000313 ORTHO05D000065 1.0e-11 74.3 73 50.7
BolC7t40570H Brassica oleracea HOM05D000313 ORTHO05D000065 1.0e-11 74.3 71 54.9
BcaC09g49275 Brassica carinata HOM05D000313 ORTHO05D000065 1.8e-11 73.6 71 54.9
A02p22940 Brassica napus HOM05D000313 ORTHO05D000065 1.8e-11 73.6 81 49.4
A03p56240 Brassica napus HOM05D000313 ORTHO05D000065 1.8e-11 73.6 81 49.4
C01p35750 Brassica napus HOM05D000313 ORTHO05D000065 1.8e-11 73.6 71 53.5
C01p40640 Brassica napus HOM05D000313 ORTHO05D000065 1.8e-11 73.6 71 54.9
C07p23830 Brassica napus HOM05D000313 ORTHO05D000065 1.8e-11 73.6 71 53.5
BolC1t03534H Brassica oleracea HOM05D000313 ORTHO05D000065 1.8e-11 73.6 71 53.5
BcaC02g07753 Brassica carinata HOM05D000313 ORTHO05D000065 3.0e-11 72.8 73 52.1
BcaC02g08554 Brassica carinata HOM05D000313 ORTHO05D000065 3.0e-11 72.8 56 64.3
A09p20060 Brassica napus HOM05D000313 ORTHO05D000065 4.0e-11 72.4 57 64.9
BcaC02g08920 Brassica carinata HOM05D000313 ORTHO05D000065 5.2e-11 72.0 57 66.7
A05p21270 Brassica napus HOM05D000313 ORTHO05D000065 5.2e-11 72.0 57 66.7
C09p33280 Brassica napus HOM05D000313 ORTHO05D000065 5.2e-11 72.0 57 66.7
BolC4t26494H Brassica oleracea HOM05D000313 ORTHO05D000065 5.2e-11 72.0 57 66.7
BolC9t56164H Brassica oleracea HOM05D000313 ORTHO05D000065 5.2e-11 72.0 57 66.7
BraA05t21034Z Brassica rapa HOM05D000313 ORTHO05D000065 5.2e-11 72.0 57 66.7
C05p31010 Brassica napus HOM05D000313 ORTHO05D000065 6.8e-11 71.6 57 64.9
A10p12060 Brassica napus HOM05D000313 ORTHO05D000065 8.8e-11 71.2 57 66.7
C01p38920 Brassica napus HOM05D000313 ORTHO05D000065 8.8e-11 71.2 57 63.2
BolC1t03842H Brassica oleracea HOM05D000313 ORTHO05D000065 8.8e-11 71.2 57 63.2
BraA09t39507Z Brassica rapa HOM05D000313 ORTHO05D000065 8.8e-11 71.2 57 66.7
BcaB04g16903 Brassica carinata HOM05D000313 ORTHO05D000065 1.2e-10 70.9 57 61.4
C09p44110 Brassica napus HOM05D000313 ORTHO05D000065 1.5e-10 70.5 57 63.2
C05p46420 Brassica napus HOM05D000313 ORTHO05D000065 2.0e-10 70.1 71 52.1
BcaB05g23613 Brassica carinata HOM05D000313 ORTHO05D000065 2.6e-10 69.7 46 78.3
BcaC05g27737 Brassica carinata HOM05D000313 ORTHO05D000065 3.4e-10 69.3 71 50.7
A03p45920 Brassica napus HOM05D000313 ORTHO05D000065 3.4e-10 69.3 71 50.7
C05p37250 Brassica napus HOM05D000313 ORTHO05D000065 3.4e-10 69.3 71 50.7
BcaB01g02353 Brassica carinata HOM05D000313 ORTHO05D000065 4.4e-10 68.9 57 61.4
BraA01t04033Z Brassica rapa HOM05D000313 ORTHO05D000065 7.5e-10 68.2 57 63.2
BcaC02g12357 Brassica carinata HOM05D000313 ORTHO05D000065 9.8e-10 67.8 57 63.2
A03p13160 Brassica napus HOM05D000313 ORTHO05D000065 9.8e-10 67.8 54 63.0
BolC4t22110H Brassica oleracea HOM05D000313 ORTHO05D000065 9.8e-10 67.8 57 63.2
BcaB07g33840 Brassica carinata HOM05D000313 ORTHO05D000065 1.3e-09 67.4 56 58.9
BcaC08g44549 Brassica carinata HOM05D000313 ORTHO05D000065 1.3e-09 67.4 57 63.2
A07p14650 Brassica napus HOM05D000313 ORTHO05D000065 1.3e-09 67.4 45 73.3
C07p00620 Brassica napus HOM05D000313 ORTHO05D000065 1.3e-09 67.4 96 41.7
BcaC03g16075 Brassica carinata HOM05D000022 ORTHO05D013684 3.7e-09 65.9 57 59.6
BcaC05g27194 Brassica carinata HOM05D000313 ORTHO05D000065 3.7e-09 65.9 57 61.4
C01p04300 Brassica napus HOM05D000313 ORTHO05D000065 3.7e-09 65.9 71 49.3
BolC2t09854H Brassica oleracea HOM05D000313 ORTHO05D000065 3.7e-09 65.9 57 59.6
BcaB07g33821 Brassica carinata HOM05D000313 ORTHO05D000065 4.9e-09 65.5 57 57.9
BcaC06g34226 Brassica carinata HOM05D000313 ORTHO05D000065 6.3e-09 65.1 55 63.6
C05p17990 Brassica napus HOM05D000313 ORTHO05D000065 1.1e-08 64.3 57 59.6
BolC5t30506H Brassica oleracea HOM05D000313 ORTHO05D000065 1.1e-08 64.3 57 59.6
BcaC05g27414 Brassica carinata HOM05D000313 ORTHO05D000065 1.4e-08 63.9 43 74.4
A10p14410 Brassica napus HOM05D000313 ORTHO05D000065 1.4e-08 63.9 48 64.6
C03p73930 Brassica napus HOM05D000313 ORTHO05D018464 1.4e-08 63.9 44 70.5
BcaB05g23614 Brassica carinata HOM05D002582 ORTHO05D002781 3.1e-08 62.8 42 81.0
C04p49110 Brassica napus HOM05D000313 ORTHO05D000065 3.1e-08 62.8 48 66.7
BolC4t23669H Brassica oleracea HOM05D000313 ORTHO05D000065 9.1e-08 61.2 46 63.0
BraA09t39438Z Brassica rapa HOM05D000313 ORTHO05D000065 9.1e-08 61.2 49 63.3
BcaB03g16224 Brassica carinata HOM05D000313 ORTHO05D000065 1.2e-07 60.8 45 62.2
C03p72030 Brassica napus HOM05D000313 ORTHO05D000065 2.0e-07 60.1 42 66.7
BolC8t46955H Brassica oleracea HOM05D000313 ORTHO05D000065 2.7e-07 59.7 92 40.2
BolC9t53456H Brassica oleracea HOM05D000313 ORTHO05D000065 3.5e-07 59.3 46 63.0
A02p29540 Brassica napus HOM05D000313 ORTHO05D000065 4.5e-07 58.9 77 45.5
BraA02t07979Z Brassica rapa HOM05D000313 ORTHO05D003591 4.5e-07 58.9 77 45.5
BcaC02g07918 Brassica carinata HOM05D000313 ORTHO05D000065 5.9e-07 58.5 47 61.7
A05p19140 Brassica napus HOM05D000313 ORTHO05D000065 5.9e-07 58.5 55 54.5
C04p04790 Brassica napus HOM05D000313 ORTHO05D000065 5.9e-07 58.5 45 66.7
BcaB02g07631 Brassica carinata HOM05D000313 ORTHO05D000065 1.0e-06 57.8 56 57.1
A08p04810 Brassica napus HOM05D000313 ORTHO05D000065 1.0e-06 57.8 55 54.5
C02p29080 Brassica napus HOM05D000041 ORTHO05D000065 1.0e-06 57.8 43 67.4
BcaC06g30789 Brassica carinata HOM05D000313 ORTHO05D000065 1.3e-06 57.4 57 50.9
A02p13460 Brassica napus HOM05D000313 ORTHO05D000065 1.7e-06 57.0 77 41.6
BolC3t19501H Brassica oleracea HOM05D000313 ORTHO05D000065 1.7e-06 57.0 42 64.3
BcaC01g05658 Brassica carinata HOM05D000313 ORTHO05D000065 2.3e-06 56.6 43 62.8
BcaB02g06763 Brassica carinata HOM05D000313 ORTHO05D000065 2.9e-06 56.2 148 33.8
BcaC07g37625 Brassica carinata HOM05D000313 ORTHO05D000065 2.9e-06 56.2 76 43.4
BolC1t03899H Brassica oleracea HOM05D000313 ORTHO05D041652 2.9e-06 56.2 40 62.5
BcaC02g10698 Brassica carinata HOM05D000313 ORTHO05D000065 3.8e-06 55.8 65 49.2
BcaC04g21544 Brassica carinata HOM05D000313 ORTHO05D000065 3.8e-06 55.8 61 52.5
A03p36970 Brassica napus HOM05D000313 ORTHO05D000065 5.0e-06 55.5 53 52.8
A07p36100 Brassica napus HOM05D000313 ORTHO05D000065 5.0e-06 55.5 53 52.8
BcaC01g04545 Brassica carinata HOM05D000313 ORTHO05D000065 6.6e-06 55.1 53 52.8
BraA10t43815Z Brassica rapa HOM05D000313 ORTHO05D000065 6.6e-06 55.1 76 40.8
C07p31390 Brassica napus HOM05D000313 ORTHO05D000065 8.6e-06 54.7 38 68.4


User provided reference genes

Program Settings