Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g23192 Brassica carinata HOM05D000313 ORTHO05D000065 2.9e-41 171.4 83 100.0
BraA05t20941Z Brassica rapa HOM05D000313 ORTHO05D000065 1.4e-11 72.8 47 72.3
BcaB07g33840 Brassica carinata HOM05D000313 ORTHO05D000065 5.4e-11 70.9 49 73.5
BcaB07g33821 Brassica carinata HOM05D000313 ORTHO05D000065 9.1e-11 70.1 68 57.4
BcaC03g14829 Brassica carinata HOM05D000313 ORTHO05D024250 9.1e-11 70.1 52 67.3
BcaC04g21063 Brassica carinata HOM05D001861 ORTHO05D001868 9.1e-11 70.1 46 69.6
C09p36090 Brassica napus HOM05D001861 ORTHO05D001868 9.1e-11 70.1 46 69.6
BolC9t56449H Brassica oleracea HOM05D001861 ORTHO05D001868 9.1e-11 70.1 46 69.6
BcaB01g01266 Brassica carinata HOM05D000313 ORTHO05D000065 2.0e-10 68.9 62 62.9
BcaB05g21583 Brassica carinata HOM05D000313 ORTHO05D000065 2.0e-10 68.9 79 48.1
BcaC08g44549 Brassica carinata HOM05D000313 ORTHO05D000065 2.0e-10 68.9 50 72.0
A05p23930 Brassica napus HOM05D000313 ORTHO05D000065 2.0e-10 68.9 35 88.6
BcaB07g33660 Brassica carinata HOM05D000313 ORTHO05D001242 2.7e-10 68.6 50 72.0
BcaB08g36534 Brassica carinata HOM05D000313 ORTHO05D000065 3.5e-10 68.2 36 80.6
BcaC08g44117 Brassica carinata HOM05D000313 ORTHO05D000065 3.5e-10 68.2 53 69.8
A10p12060 Brassica napus HOM05D000313 ORTHO05D000065 3.5e-10 68.2 53 69.8
C09p33280 Brassica napus HOM05D000313 ORTHO05D000065 3.5e-10 68.2 36 86.1
BolC9t56164H Brassica oleracea HOM05D000313 ORTHO05D000065 3.5e-10 68.2 36 86.1
BraA09t39507Z Brassica rapa HOM05D000313 ORTHO05D000065 3.5e-10 68.2 53 69.8
BcaB04g17117 Brassica carinata HOM05D000313 ORTHO05D000065 4.5e-10 67.8 53 64.2
BcaC02g07918 Brassica carinata HOM05D000313 ORTHO05D000065 4.5e-10 67.8 49 67.3
A05p21270 Brassica napus HOM05D000313 ORTHO05D000065 4.5e-10 67.8 36 83.3
BraA05t21034Z Brassica rapa HOM05D000313 ORTHO05D000065 4.5e-10 67.8 36 83.3
BcaC02g08920 Brassica carinata HOM05D000313 ORTHO05D000065 5.9e-10 67.4 54 66.7
A02p13460 Brassica napus HOM05D000313 ORTHO05D000065 5.9e-10 67.4 56 64.3
C05p17990 Brassica napus HOM05D000313 ORTHO05D000065 5.9e-10 67.4 51 70.6
BolC4t26494H Brassica oleracea HOM05D000313 ORTHO05D000065 5.9e-10 67.4 54 66.7
BolC5t30506H Brassica oleracea HOM05D000313 ORTHO05D000065 5.9e-10 67.4 51 70.6
BraSC36t46097Z Brassica rapa HOM05D000313 ORTHO05D000065 5.9e-10 67.4 38 81.6
A02p30980 Brassica napus HOM05D000313 ORTHO05D000065 7.7e-10 67.0 55 60.0
BcaB02g11204 Brassica carinata HOM05D000313 ORTHO05D000065 1.0e-09 66.6 50 70.0
BcaB02g11419 Brassica carinata HOM05D000313 ORTHO05D001242 1.0e-09 66.6 50 70.0
BcaB04g18556 Brassica carinata HOM05D000313 ORTHO05D000065 1.0e-09 66.6 75 48.0
BcaB08g34863 Brassica carinata HOM05D000313 ORTHO05D000065 1.0e-09 66.6 34 82.4
BolC2t09551H Brassica oleracea HOM05D000313 ORTHO05D000065 1.0e-09 66.6 37 81.1
BolC2t10031H Brassica oleracea HOM05D003545 ORTHO05D011382 1.0e-09 66.6 52 67.3
BcaB02g06763 Brassica carinata HOM05D000313 ORTHO05D000065 1.3e-09 66.2 51 62.7
BcaB04g17760 Brassica carinata HOM05D000313 ORTHO05D000065 1.3e-09 66.2 51 68.6
C01p04300 Brassica napus HOM05D000313 ORTHO05D000065 1.3e-09 66.2 42 73.8
BraA01t04033Z Brassica rapa HOM05D000313 ORTHO05D000065 1.3e-09 66.2 51 68.6
BcaC05g27737 Brassica carinata HOM05D000313 ORTHO05D000065 1.7e-09 65.9 33 87.9
A03p45920 Brassica napus HOM05D000313 ORTHO05D000065 1.7e-09 65.9 50 70.0
C05p37250 Brassica napus HOM05D000313 ORTHO05D000065 1.7e-09 65.9 33 87.9
C09p44110 Brassica napus HOM05D000313 ORTHO05D000065 1.7e-09 65.9 33 87.9
BraA05t21272Z Brassica rapa HOM05D000313 ORTHO05D000065 1.7e-09 65.9 33 87.9
BcaC02g12357 Brassica carinata HOM05D000313 ORTHO05D000065 2.2e-09 65.5 53 66.0
A10p07210 Brassica napus HOM05D000313 ORTHO05D000065 2.2e-09 65.5 51 68.6
C06p14310 Brassica napus HOM05D000313 ORTHO05D000065 2.2e-09 65.5 38 76.3
BcaC03g16075 Brassica carinata HOM05D000022 ORTHO05D013684 2.9e-09 65.1 67 53.7
A01p33560 Brassica napus HOM05D000313 ORTHO05D000065 2.9e-09 65.1 35 80.0
BolC2t09854H Brassica oleracea HOM05D000313 ORTHO05D000065 2.9e-09 65.1 67 53.7
BolC4t22110H Brassica oleracea HOM05D000313 ORTHO05D000065 2.9e-09 65.1 53 66.0
BolC4t27877H Brassica oleracea HOM05D000313 ORTHO05D000065 2.9e-09 65.1 87 43.7
BcaC04g21544 Brassica carinata HOM05D000313 ORTHO05D000065 3.8e-09 64.7 33 84.8
BcaC06g30789 Brassica carinata HOM05D000313 ORTHO05D000065 3.8e-09 64.7 121 38.0
BcaC06g36731 Brassica carinata HOM05D000313 ORTHO05D000065 3.8e-09 64.7 33 84.8
A05p25890 Brassica napus HOM05D000313 ORTHO05D000065 3.8e-09 64.7 33 84.8
C01p35750 Brassica napus HOM05D000313 ORTHO05D000065 3.8e-09 64.7 33 84.8
C02p40980 Brassica napus HOM05D000313 ORTHO05D000065 3.8e-09 64.7 33 84.8
C05p46420 Brassica napus HOM05D000313 ORTHO05D000065 3.8e-09 64.7 36 75.0
C07p20830 Brassica napus HOM05D000313 ORTHO05D000065 3.8e-09 64.7 50 66.0
BolC1t03534H Brassica oleracea HOM05D000313 ORTHO05D000065 3.8e-09 64.7 33 84.8
BolC2t08432H Brassica oleracea HOM05D000313 ORTHO05D024250 3.8e-09 64.7 35 77.1
BolC7t40506H Brassica oleracea HOM05D000313 ORTHO05D000065 3.8e-09 64.7 33 84.8
BcaB01g02222 Brassica carinata HOM05D000313 ORTHO05D000065 5.0e-09 64.3 48 62.5
BcaC05g27414 Brassica carinata HOM05D000313 ORTHO05D000065 5.0e-09 64.3 36 77.8
BcaC06g31618 Brassica carinata HOM05D000313 ORTHO05D000065 5.0e-09 64.3 45 62.2
BcaB04g18203 Brassica carinata HOM05D000313 ORTHO05D000065 6.5e-09 63.9 50 66.0
BcaC02g08554 Brassica carinata HOM05D000313 ORTHO05D000065 6.5e-09 63.9 33 84.8
BcaC02g08674 Brassica carinata HOM05D000313 ORTHO05D000065 6.5e-09 63.9 36 75.0
BcaC06g36665 Brassica carinata HOM05D000313 ORTHO05D000065 6.5e-09 63.9 51 68.6
C05p33640 Brassica napus HOM05D000313 ORTHO05D000065 6.5e-09 63.9 35 77.1
C08p27740 Brassica napus HOM05D000313 ORTHO05D000065 6.5e-09 63.9 36 75.0
BolC5t32095H Brassica oleracea HOM05D000313 ORTHO05D000065 6.5e-09 63.9 35 77.1
BolC7t40570H Brassica oleracea HOM05D000313 ORTHO05D000065 6.5e-09 63.9 51 68.6
BcaB07g32276 Brassica carinata HOM05D000313 ORTHO05D000065 8.5e-09 63.5 50 68.0
BcaC09g49275 Brassica carinata HOM05D000313 ORTHO05D000065 8.5e-09 63.5 33 81.8
A03p61810 Brassica napus HOM05D000313 ORTHO05D000065 8.5e-09 63.5 36 75.0
C01p40640 Brassica napus HOM05D000313 ORTHO05D000065 8.5e-09 63.5 33 81.8
C05p31010 Brassica napus HOM05D000313 ORTHO05D000065 8.5e-09 63.5 36 72.2
BcaB02g10989 Brassica carinata HOM05D000313 ORTHO05D000065 1.1e-08 63.2 36 75.0
BcaB04g17856 Brassica carinata HOM05D000313 ORTHO05D000065 1.1e-08 63.2 33 81.8
BcaB08g34831 Brassica carinata HOM05D000313 ORTHO05D000065 1.1e-08 63.2 33 81.8
A09p23680 Brassica napus HOM05D000313 ORTHO05D000065 1.1e-08 63.2 36 72.2
A09p47000 Brassica napus HOM05D000313 ORTHO05D000065 1.1e-08 63.2 36 72.2
C02p40050 Brassica napus HOM05D003545 ORTHO05D011382 1.1e-08 63.2 34 82.4
BraA07t29010Z Brassica rapa HOM05D000313 ORTHO05D000065 1.1e-08 63.2 36 72.2
BraA09t40166Z Brassica rapa HOM05D000313 ORTHO05D000065 1.1e-08 63.2 36 72.2
A04p18750 Brassica napus HOM05D000313 ORTHO05D000065 1.5e-08 62.8 35 80.0
BcaB02g07631 Brassica carinata HOM05D000313 ORTHO05D000065 1.9e-08 62.4 35 77.1
A09p19680 Brassica napus HOM05D000313 ORTHO05D000065 1.9e-08 62.4 53 60.4
C04p21440 Brassica napus HOM05D000313 ORTHO05D000065 1.9e-08 62.4 35 74.3
BolC4t23669H Brassica oleracea HOM05D000313 ORTHO05D000065 1.9e-08 62.4 35 74.3
A09p20060 Brassica napus HOM05D000313 ORTHO05D000065 2.5e-08 62.0 53 60.4
BolC3t16353H Brassica oleracea HOM05D000313 ORTHO05D000065 2.5e-08 62.0 33 81.8
BolC3t21647H Brassica oleracea HOM05D000313 ORTHO05D000065 2.5e-08 62.0 54 57.4
BcaB06g27168 Brassica carinata HOM05D000074 ORTHO05D000065 3.2e-08 61.6 34 79.4
A07p12260 Brassica napus HOM05D000313 ORTHO05D000065 3.2e-08 61.6 36 72.2
C04p18340 Brassica napus HOM05D000313 ORTHO05D000065 3.2e-08 61.6 33 81.8
A09p19730 Brassica napus HOM05D000313 ORTHO05D000065 4.2e-08 61.2 38 76.3
BolC1t03899H Brassica oleracea HOM05D000313 ORTHO05D041652 4.2e-08 61.2 52 63.5
BcaC06g34226 Brassica carinata HOM05D000313 ORTHO05D000065 5.5e-08 60.8 35 80.0
C06p21290 Brassica napus HOM05D000108 ORTHO05D011597 5.5e-08 60.8 36 72.2
A10p27780 Brassica napus HOM05D000313 ORTHO05D024340 7.2e-08 60.5 32 75.0
C07p15520 Brassica napus HOM05D000313 ORTHO05D000065 7.2e-08 60.5 54 57.4
BolC7t42040H Brassica oleracea HOM05D000313 ORTHO05D000065 7.2e-08 60.5 54 57.4
BraA02t07578Z Brassica rapa HOM05D000313 ORTHO05D024250 7.2e-08 60.5 35 71.4
BraA03t10335Z Brassica rapa HOM05D000313 ORTHO05D024340 7.2e-08 60.5 32 75.0
BcaC02g09353 Brassica carinata HOM05D000313 ORTHO05D000065 9.4e-08 60.1 36 69.4
A02p29540 Brassica napus HOM05D000313 ORTHO05D000065 1.2e-07 59.7 36 72.2
BraA02t07979Z Brassica rapa HOM05D000313 ORTHO05D003591 1.2e-07 59.7 36 72.2
BolC6t37314H Brassica oleracea HOM05D000313 ORTHO05D011597 1.6e-07 59.3 36 69.4
BcaC06g35487 Brassica carinata HOM05D000313 ORTHO05D000065 2.1e-07 58.9 36 69.4
BcaC07g38641 Brassica carinata HOM05D001127 ORTHO05D024340 2.7e-07 58.5 50 64.0
BolC9t55362H Brassica oleracea HOM05D000313 ORTHO05D000065 2.7e-07 58.5 38 68.4
BcaC02g07753 Brassica carinata HOM05D000313 ORTHO05D000065 4.7e-07 57.8 29 82.8
A10p03430 Brassica napus HOM05D015593 ORTHO05D000065 4.7e-07 57.8 47 66.0
C08p14050 Brassica napus HOM05D015593 ORTHO05D000065 6.1e-07 57.4 61 57.4
BcaC02g10703 Brassica carinata HOM05D000313 ORTHO05D000065 8.0e-07 57.0 38 65.8
BcaC06g35352 Brassica carinata HOM05D001861 ORTHO05D001868 8.0e-07 57.0 37 67.6
C02p48770 Brassica napus HOM05D000285 ORTHO05D005607 8.0e-07 57.0 44 65.9
C04p26900 Brassica napus HOM05D000313 ORTHO05D000065 8.0e-07 57.0 38 65.8
BolC3t16695H Brassica oleracea HOM05D000313 ORTHO05D000065 8.0e-07 57.0 34 76.5
BolC5t32352H Brassica oleracea HOM05D000313 ORTHO05D018613 8.0e-07 57.0 66 53.0
BcaC01g04173 Brassica carinata HOM05D000313 ORTHO05D000065 1.0e-06 56.6 33 78.8
C03p44260 Brassica napus HOM05D000313 ORTHO05D000065 1.0e-06 56.6 33 78.8
BolC1t03286H Brassica oleracea HOM05D014428 ORTHO05D021653 1.4e-06 56.2 82 42.7
BcaC07g36882 Brassica carinata HOM05D000041 ORTHO05D000065 1.8e-06 55.8 47 59.6
BcaC01g01836 Brassica carinata HOM05D016493 ORTHO05D021685 2.3e-06 55.5 32 75.0
BolC2t10316H Brassica oleracea HOM05D000313 ORTHO05D000065 2.3e-06 55.5 29 82.8
BolC2t10974H Brassica oleracea HOM05D000313 ORTHO05D000065 2.3e-06 55.5 43 65.1
BcaC01g02161 Brassica carinata HOM05D000313 ORTHO05D000065 3.0e-06 55.1 67 40.3
A08p14190 Brassica napus HOM05D014428 ORTHO05D021653 3.0e-06 55.1 82 42.7
C03p68040 Brassica napus HOM05D000313 ORTHO05D000065 3.0e-06 55.1 67 40.3
C09p24470 Brassica napus HOM05D000313 ORTHO05D000065 3.0e-06 55.1 38 63.2
BolC3t19028H Brassica oleracea HOM05D000313 ORTHO05D000065 3.0e-06 55.1 67 40.3
BraA08t33413Z Brassica rapa HOM05D014428 ORTHO05D021653 3.0e-06 55.1 82 42.7
BraA10t42620Z Brassica rapa HOM05D000313 ORTHO05D000065 3.0e-06 55.1 29 82.8
BraA09t36714Z Brassica rapa HOM05D004777 ORTHO05D022002 4.0e-06 54.7 38 65.8
BcaB05g23613 Brassica carinata HOM05D000313 ORTHO05D000065 5.2e-06 54.3 39 64.1
BcaB06g29149 Brassica carinata HOM05D000313 ORTHO05D000065 6.8e-06 53.9 33 69.7
BolC6t36221H Brassica oleracea HOM05D000313 ORTHO05D000065 6.8e-06 53.9 31 64.5
BraA02t08108Z Brassica rapa HOM05D001724 ORTHO05D007284 6.8e-06 53.9 32 75.0
C08p01460 Brassica napus HOM05D000313 ORTHO05D000065 8.8e-06 53.5 50 54.0
BolC2t09566H Brassica oleracea HOM05D004777 ORTHO05D022002 8.8e-06 53.5 38 63.2
BolC3t20605H Brassica oleracea HOM05D004777 ORTHO05D022002 8.8e-06 53.5 38 63.2


User provided reference genes

Program Settings