Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g23167 Brassica carinata HOM05D012517 ORTHO05D014406 9.2e-32 140.2 106 100.0
BcaC09g49978 Brassica carinata HOM05D012517 ORTHO05D014406 1.9e-24 115.9 111 88.3
BolC1t02988H Brassica oleracea HOM05D012517 ORTHO05D014406 1.9e-24 115.9 111 88.3
BolC8t50103H Brassica oleracea HOM05D012517 ORTHO05D014406 1.9e-21 105.9 110 81.8
AL5G29850 Arabidopsis lyrata HOM05D012517 ORTHO05D014406 5.6e-21 104.4 110 84.5
BcaC07g39450 Brassica carinata HOM05D012517 ORTHO05D014406 9.5e-21 103.6 106 88.7
C08p24870 Brassica napus HOM05D012517 ORTHO05D014406 9.5e-21 103.6 106 88.7
Carub.0005s1620 Capsella rubella HOM05D012517 ORTHO05D014406 5.2e-19 97.8 115 80.0
BraA09t39770Z Brassica rapa HOM05D012517 ORTHO05D014406 1.2e-18 96.7 106 82.1
C01p30450 Brassica napus HOM05D012517 ORTHO05D014406 2.7e-15 85.5 68 82.4
Thhalv10010776m.g Eutrema salsugineum HOM05D012517 ORTHO05D014406 2.1e-12 75.9 108 78.7
BcaB01g00658 Brassica carinata HOM05D012517 ORTHO05D014406 2.8e-12 75.5 92 81.5
AT3G49845 Arabidopsis thaliana HOM05D012517 ORTHO05D014406 1.8e-11 72.8 123 67.5
CARHR158920 Cardamine hirsuta HOM05D012517 ORTHO05D014406 1.2e-10 70.1 112 69.6


User provided reference genes

Program Settings