Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g23165 Brassica carinata HOM05D007502 ORTHO05D011692 8.8e-69 263.5 130 100.0
A01p24440 Brassica napus HOM05D007502 ORTHO05D011692 2.0e-57 225.7 130 87.7
BraA01t02357Z Brassica rapa HOM05D007502 ORTHO05D011692 7.7e-57 223.8 130 86.9
BcaC09g49977 Brassica carinata HOM05D007502 ORTHO05D011692 1.7e-56 222.6 130 86.2
C01p30460 Brassica napus HOM05D007502 ORTHO05D011692 1.7e-56 222.6 130 86.2
BolC1t02989H Brassica oleracea HOM05D007502 ORTHO05D011692 1.7e-56 222.6 130 86.2
AT3G49820 Arabidopsis thaliana HOM05D007502 ORTHO05D011692 1.5e-47 193.0 126 77.8
Thhalv10011022m.g Eutrema salsugineum HOM05D007502 ORTHO05D011692 1.9e-47 192.6 126 77.0
Sp5g12270 Schrenkiella parvula HOM05D007502 ORTHO05D011692 4.7e-46 188.0 124 80.6
AL5G29820 Arabidopsis lyrata HOM05D007502 ORTHO05D011692 5.4e-42 174.5 123 74.0
Carub.0005s1617 Capsella rubella HOM05D007502 ORTHO05D011692 9.5e-39 163.7 125 69.6
CARHR158890 Cardamine hirsuta HOM05D007502 ORTHO05D011692 1.1e-37 160.2 127 69.3
BraA06t26210Z Brassica rapa HOM05D007502 ORTHO05D011692 7.8e-25 117.5 129 55.0
AL8G43640 Arabidopsis lyrata HOM05D007502 ORTHO05D011692 2.3e-24 115.9 133 52.6
A06p32780 Brassica napus HOM05D007502 ORTHO05D011692 2.3e-24 115.9 132 53.8
A02p44110 Brassica napus HOM05D007502 ORTHO05D011692 3.9e-24 115.2 138 52.2
BraA02t09334Z Brassica rapa HOM05D007502 ORTHO05D011692 3.9e-24 115.2 138 52.2
C02p64370 Brassica napus HOM05D007502 ORTHO05D011692 5.1e-24 114.8 138 52.2
BolC2t12501H Brassica oleracea HOM05D007502 ORTHO05D011692 5.1e-24 114.8 138 52.2
AT5G65925 Arabidopsis thaliana HOM05D007502 ORTHO05D011692 2.5e-23 112.5 136 50.0
C03p59700 Brassica napus HOM05D007502 ORTHO05D011692 3.3e-23 112.1 132 50.8
BolC3t18232H Brassica oleracea HOM05D007502 ORTHO05D011692 3.3e-23 112.1 132 50.8
Sp2g29000 Schrenkiella parvula HOM05D007502 ORTHO05D011692 1.2e-22 110.2 135 49.6
BcaB02g09908 Brassica carinata HOM05D007502 ORTHO05D011692 4.7e-22 108.2 136 49.3
Carub.0008s2682 Capsella rubella HOM05D007502 ORTHO05D011692 3.1e-21 105.5 131 51.9
CARHR279940 Cardamine hirsuta HOM05D007502 ORTHO05D011692 4.0e-21 105.1 135 49.6
Thhalv10005632m.g Eutrema salsugineum HOM05D007502 ORTHO05D011692 6.8e-21 104.4 143 46.9
BcaC03g18361 Brassica carinata HOM05D007502 ORTHO05D011692 1.7e-16 89.7 114 51.8
CAN.G1075.51 Capsicum annuum HOM05D001896 ORTHO05D001862 1.5e-07 60.1 137 35.8
VMungo1309G2110 Vigna mungo HOM05D001896 ORTHO05D001862 9.6e-07 57.4 149 32.9
Thecc.08G086000 Theobroma cacao HOM05D001896 ORTHO05D001862 2.1e-06 56.2 137 34.3


User provided reference genes

Program Settings