Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g23144 Brassica carinata HOM05D003376 ORTHO05D011035 5.2e-150 534.3 254 100.0
BcaB05g22926 Brassica carinata HOM05D003376 ORTHO05D011035 3.2e-123 445.3 263 84.0
BraA06t26275Z Brassica rapa HOM05D003376 ORTHO05D011035 5.9e-85 318.2 255 61.6
AL88U10010 Arabidopsis lyrata HOM05D003376 ORTHO05D001185 6.5e-84 314.7 270 57.8
AL88U10020 Arabidopsis lyrata HOM05D003376 ORTHO05D001185 6.5e-84 314.7 271 57.6
AL6G42760 Arabidopsis lyrata HOM05D003376 ORTHO05D001185 1.5e-83 313.5 271 56.8
AL8G17310 Arabidopsis lyrata HOM05D003376 ORTHO05D001185 3.2e-83 312.4 271 56.8
A08p07150 Brassica napus HOM05D003376 ORTHO05D011035 3.0e-81 305.8 243 61.7
AL1G57140 Arabidopsis lyrata HOM05D003376 ORTHO05D001185 9.7e-80 300.8 267 55.1
AL3G45060 Arabidopsis lyrata HOM05D003376 ORTHO05D001185 1.0e-76 290.8 262 54.6
BolC1t03803H Brassica oleracea HOM05D003376 ORTHO05D011035 1.9e-75 286.6 195 69.2
C05p40830 Brassica napus HOM05D003376 ORTHO05D011035 4.7e-74 282.0 202 65.3
BcaB06g26710 Brassica carinata HOM05D003376 ORTHO05D011035 2.2e-71 273.1 208 65.4
C03p85050 Brassica napus HOM05D003376 ORTHO05D001185 5.0e-68 261.9 215 61.4
AL8G17350 Arabidopsis lyrata HOM05D003376 ORTHO05D000002 1.0e-65 254.2 201 62.2
BraA09t38517Z Brassica rapa HOM05D003376 ORTHO05D011035 2.3e-65 253.1 179 64.8
AL3G45070 Arabidopsis lyrata HOM05D003376 ORTHO05D011035 5.2e-65 251.9 182 64.3
AL8G17360 Arabidopsis lyrata HOM05D003376 ORTHO05D011035 5.2e-65 251.9 201 61.2
A01p23940 Brassica napus HOM05D003376 ORTHO05D011035 1.7e-63 246.9 214 58.4
BraA01t02301Z Brassica rapa HOM05D003376 ORTHO05D011035 1.7e-63 246.9 214 58.4
A06p25210 Brassica napus HOM05D003376 ORTHO05D011035 2.3e-57 226.5 137 76.6
A05p12460 Brassica napus HOM05D003376 ORTHO05D011035 1.2e-56 224.2 137 75.9
A04p12700 Brassica napus HOM05D003376 ORTHO05D011035 2.0e-56 223.4 137 75.2
A09p27410 Brassica napus HOM05D003376 ORTHO05D011035 4.4e-56 222.2 137 75.9
BolC1t03799H Brassica oleracea HOM05D003376 ORTHO05D011035 2.9e-55 219.5 203 56.2
AL8G17340 Arabidopsis lyrata HOM05D003376 ORTHO05D011035 3.7e-55 219.2 157 66.2
A09p25410 Brassica napus HOM05D003376 ORTHO05D011035 1.8e-54 216.9 137 74.5
BraA08t32728Z Brassica rapa HOM05D003376 ORTHO05D011035 5.9e-53 211.8 176 59.7
BolC7t43331H Brassica oleracea HOM05D003376 ORTHO05D011035 9.5e-51 204.5 157 63.1
C07p27980 Brassica napus HOM05D003376 ORTHO05D011035 8.0e-50 201.4 157 61.8
BraA02t07682Z Brassica rapa HOM05D003376 ORTHO05D011035 2.6e-48 196.4 197 52.8
BolC6t37675H Brassica oleracea HOM05D003376 ORTHO05D011035 7.5e-48 194.9 216 50.0
C06p15850 Brassica napus HOM05D003376 ORTHO05D011035 1.7e-47 193.7 139 66.2
C06p25180 Brassica napus HOM05D003376 ORTHO05D011035 3.5e-45 186.0 108 75.9
BolC4t23956H Brassica oleracea HOM05D003376 ORTHO05D011035 1.7e-39 167.2 107 68.2
C04p24540 Brassica napus HOM05D003376 ORTHO05D011035 7.1e-38 161.8 107 66.4
BcaB01g00898 Brassica carinata HOM05D003376 ORTHO05D011035 4.3e-35 152.5 103 76.7
BolC5t32826H Brassica oleracea HOM05D003376 ORTHO05D011035 1.9e-27 127.1 99 63.6
A05p12470 Brassica napus HOM05D003376 ORTHO05D011035 5.6e-27 125.6 128 52.3
BraA06t26273Z Brassica rapa HOM05D003376 ORTHO05D011035 9.9e-24 114.8 87 62.1
A04p12690 Brassica napus HOM05D003376 ORTHO05D001185 1.6e-21 107.5 130 46.9
BraA04t16927Z Brassica rapa HOM05D003376 ORTHO05D001185 1.6e-21 107.5 130 46.9
BolC6t36777H Brassica oleracea HOM05D003376 ORTHO05D011035 2.7e-21 106.7 89 61.8
Thhalv10001178m.g Eutrema salsugineum HOM05D003376 ORTHO05D011035 6.6e-20 102.1 79 63.3
A09p25420 Brassica napus HOM05D003376 ORTHO05D011035 1.4e-17 94.4 107 49.5
A02p26780 Brassica napus HOM05D003376 ORTHO05D011035 1.3e-15 87.8 107 47.7
BraA06t26276Z Brassica rapa HOM05D003376 ORTHO05D011035 3.9e-12 76.3 82 47.6
AL8G17330 Arabidopsis lyrata HOM05D003376 ORTHO05D011035 5.1e-12 75.9 102 40.2
BraA01t02206Z Brassica rapa HOM05D003376 ORTHO05D011035 2.4e-09 67.0 48 62.5
Thhalv10000705m.g Eutrema salsugineum HOM05D003376 ORTHO05D001185 3.1e-09 66.6 45 66.7
AL6G41750 Arabidopsis lyrata HOM05D003376 ORTHO05D000002 1.1e-06 58.2 50 54.0


User provided reference genes

Program Settings