Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g23142 Brassica carinata HOM05D003376 ORTHO05D001185 4.0e-218 761.1 385 100.0
BcaB01g00899 Brassica carinata HOM05D003376 ORTHO05D001185 2.2e-155 552.7 333 87.7
A05p12450 Brassica napus HOM05D003376 ORTHO05D001185 7.4e-140 501.1 397 68.3
A06p25220 Brassica napus HOM05D003376 ORTHO05D001185 1.7e-139 500.0 397 67.8
A09p27420 Brassica napus HOM05D003376 ORTHO05D001185 2.0e-137 493.0 397 67.3
Thhalv10001103m.g Eutrema salsugineum HOM05D003376 ORTHO05D001185 4.2e-135 485.3 403 66.5
AL88U10020 Arabidopsis lyrata HOM05D003376 ORTHO05D001185 1.3e-120 437.2 398 61.3
Thhalv10000496m.g Eutrema salsugineum HOM05D003376 ORTHO05D001185 2.3e-117 426.4 399 61.4
BcaB04g18321 Brassica carinata HOM05D003376 ORTHO05D001185 2.8e-115 419.5 367 64.3
BcaC06g35708 Brassica carinata HOM05D003376 ORTHO05D001185 2.8e-115 419.5 396 60.9
AL8G17320 Arabidopsis lyrata HOM05D003376 ORTHO05D001185 7.3e-111 404.8 396 58.6
AL1G57140 Arabidopsis lyrata HOM05D003376 ORTHO05D001185 5.7e-108 395.2 396 58.3
Thhalv10028343m.g Eutrema salsugineum HOM05D003376 ORTHO05D001185 1.1e-106 391.0 394 57.6
BcaC09g49326 Brassica carinata HOM05D003376 ORTHO05D001185 4.1e-106 389.0 393 59.0
AL6G42760 Arabidopsis lyrata HOM05D003376 ORTHO05D001185 8.0e-102 374.8 337 61.7
AL6G37690 Arabidopsis lyrata HOM05D003376 ORTHO05D001185 3.2e-98 362.8 337 60.5
A05p12400 Brassica napus HOM05D003376 ORTHO05D001185 3.5e-97 359.4 329 62.6
AL88U10010 Arabidopsis lyrata HOM05D003376 ORTHO05D001185 1.5e-95 354.0 391 53.2
AL8G17310 Arabidopsis lyrata HOM05D003376 ORTHO05D001185 2.5e-95 353.2 398 54.0
BcaC02g10207 Brassica carinata HOM05D003376 ORTHO05D001185 1.2e-92 344.4 354 56.8
A04p12690 Brassica napus HOM05D003376 ORTHO05D001185 1.6e-78 297.4 404 48.0
BraA04t16927Z Brassica rapa HOM05D003376 ORTHO05D001185 1.6e-78 297.4 404 48.0
BraA06t26272Z Brassica rapa HOM05D003376 ORTHO05D001185 3.1e-77 293.1 332 54.2
Thhalv10003417m.g Eutrema salsugineum HOM05D003376 ORTHO05D000048 7.8e-73 278.5 182 78.0
BcaB07g32859 Brassica carinata HOM05D003376 ORTHO05D001185 1.0e-72 278.1 269 60.6
BolC7t41653H Brassica oleracea HOM05D003376 ORTHO05D001185 1.7e-72 277.3 217 66.8
BolC1t03800H Brassica oleracea HOM05D003376 ORTHO05D001185 1.5e-71 274.2 278 57.6
BraA01t02300Z Brassica rapa HOM05D003376 ORTHO05D001185 1.6e-65 254.2 283 55.1
AL8G17340 Arabidopsis lyrata HOM05D003376 ORTHO05D011035 7.9e-65 251.9 237 58.2
A01p23930 Brassica napus HOM05D003376 ORTHO05D001185 1.0e-64 251.5 261 57.5
C03p85050 Brassica napus HOM05D003376 ORTHO05D001185 1.1e-63 248.1 236 61.0
Thhalv10002934m.g Eutrema salsugineum HOM05D003376 ORTHO05D001185 2.1e-62 243.8 390 44.1
C07p11790 Brassica napus HOM05D003376 ORTHO05D001185 6.4e-59 232.3 226 60.2
BolC1t03750H Brassica oleracea HOM05D003376 ORTHO05D001185 1.2e-57 228.0 142 81.0
AL3G45050 Arabidopsis lyrata HOM05D004134 ORTHO05D005240 1.9e-50 204.1 254 50.4
BcaB05g22757 Brassica carinata HOM05D003376 ORTHO05D001185 2.7e-49 200.3 115 89.6
BolC6t36227H Brassica oleracea HOM05D003376 ORTHO05D001185 1.5e-44 184.5 136 72.1
Thhalv10027218m.g Eutrema salsugineum HOM05D003376 ORTHO05D001185 8.5e-43 178.7 151 64.9
C01p37900 Brassica napus HOM05D003376 ORTHO05D001185 1.4e-40 171.4 141 68.1
BolC1t03751H Brassica oleracea HOM05D003376 ORTHO05D001185 1.4e-40 171.4 141 68.1
C04p09000 Brassica napus HOM05D003376 ORTHO05D001185 3.3e-39 166.8 178 56.2
BolC4t22489H Brassica oleracea HOM05D003376 ORTHO05D001185 3.3e-39 166.8 178 56.2
BcaB05g23141 Brassica carinata HOM05D003376 ORTHO05D001185 7.4e-39 165.6 111 81.1
BolC4t24704H Brassica oleracea HOM05D003376 ORTHO05D001185 2.3e-32 144.1 125 63.2
Thhalv10000705m.g Eutrema salsugineum HOM05D003376 ORTHO05D001185 3.0e-32 143.7 128 63.3
BcaB05g24586 Brassica carinata HOM05D003376 ORTHO05D001185 6.7e-32 142.5 81 88.9
BcaB08g35327 Brassica carinata HOM05D003376 ORTHO05D001185 2.6e-31 140.6 82 86.6
BolC7t43332H Brassica oleracea HOM05D003376 ORTHO05D001185 4.7e-25 119.8 236 38.6
Lj4g0014350 Lotus japonicus HOM05D005324 ORTHO05D001185 2.3e-24 117.5 237 32.9
A09p25430 Brassica napus HOM05D003376 ORTHO05D001185 5.7e-23 112.8 105 56.2
BolC4t23955H Brassica oleracea HOM05D003376 ORTHO05D001185 7.4e-23 112.5 110 58.2
Thhalv10028344m.g Eutrema salsugineum HOM05D003376 ORTHO05D001185 2.8e-22 110.5 142 37.3
BcaB01g00422 Brassica carinata HOM05D003376 ORTHO05D001185 8.2e-22 109.0 58 94.8
Lj3g0011497 Lotus japonicus HOM05D005324 ORTHO05D001185 1.1e-21 108.6 227 31.3
BolC1t03801H Brassica oleracea HOM05D003376 ORTHO05D001185 1.4e-21 108.2 151 45.7
Atru.chr3.2329 Acer truncatum HOM05D003326 ORTHO05D001185 1.8e-21 107.8 138 38.4
Lj6g0018849 Lotus japonicus HOM05D005324 ORTHO05D001185 3.1e-21 107.1 238 31.5
Ca_11659_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 7.0e-21 105.9 170 33.5
Lj2g0007658 Lotus japonicus HOM05D005324 ORTHO05D001185 9.1e-21 105.5 238 31.1
Thhalv10012231m.g Eutrema salsugineum HOM05D003376 ORTHO05D001185 1.2e-20 105.1 385 27.8
ECA236G2821 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.6e-20 104.8 241 30.7
Atru.chr9.334 Acer truncatum HOM05D005324 ORTHO05D001185 2.0e-20 104.4 106 43.4
Atru.chr7.181 Acer truncatum HOM05D005324 ORTHO05D001185 2.6e-20 104.0 388 25.8
Ca_14156_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 2.6e-20 104.0 191 32.5
Thhalv10023188m.g Eutrema salsugineum HOM05D003376 ORTHO05D000002 3.5e-20 103.6 307 27.7
Atru.chr4.959 Acer truncatum HOM05D005324 ORTHO05D001185 4.5e-20 103.2 106 45.3
Ca_13200_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 4.5e-20 103.2 239 29.7
Ca_29875_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 4.5e-20 103.2 239 29.7
Atru.chr10.1416 Acer truncatum HOM05D005324 ORTHO05D001185 1.0e-19 102.1 96 47.9
Glyma.06G234900 Glycine max HOM05D005324 ORTHO05D001185 1.3e-19 101.7 388 28.1
Atru.chr4.1769 Acer truncatum HOM05D005324 ORTHO05D001185 2.9e-19 100.5 127 37.0
Thhalv10003477m.g Eutrema salsugineum HOM05D003376 ORTHO05D001185 2.9e-19 100.5 224 29.5
HanXRQChr09g0262491 Helianthus annuus HOM05D003376 ORTHO05D001185 2.9e-19 100.5 393 24.7
HanXRQChr09g0262531 Helianthus annuus HOM05D003376 ORTHO05D001185 2.9e-19 100.5 393 24.7
HanXRQChr09g0262541 Helianthus annuus HOM05D003326 ORTHO05D001185 2.9e-19 100.5 393 24.7
HanXRQChr09g0267851 Helianthus annuus HOM05D003376 ORTHO05D001185 3.8e-19 100.1 394 24.9
Ca_14763_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 5.0e-19 99.8 158 34.8
Atru.chr13.2462 Acer truncatum HOM05D005324 ORTHO05D001185 6.5e-19 99.4 184 29.9
HanXRQChr09g0262521 Helianthus annuus HOM05D003376 ORTHO05D001185 6.5e-19 99.4 394 24.6
C04p31550 Brassica napus HOM05D003376 ORTHO05D001185 1.5e-18 98.2 104 51.0
HanXRQChr09g0262551 Helianthus annuus HOM05D003376 ORTHO05D001185 1.5e-18 98.2 394 24.6
BraA01t02207Z Brassica rapa HOM05D003376 ORTHO05D001185 2.5e-18 97.4 88 58.0
Ca_14742_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 2.5e-18 97.4 399 24.8
BolC4t23954H Brassica oleracea HOM05D003376 ORTHO05D001185 3.2e-18 97.1 64 76.6
HanXRQChr10g0281981 Helianthus annuus HOM05D003376 ORTHO05D001185 3.2e-18 97.1 393 24.4
Lj1g0026229 Lotus japonicus HOM05D005324 ORTHO05D001185 3.2e-18 97.1 98 40.8
Thhalv10002230m.g Eutrema salsugineum HOM05D003376 ORTHO05D001185 4.2e-18 96.7 119 40.3
Lj6g0006708 Lotus japonicus HOM05D005324 ORTHO05D001185 1.6e-17 94.7 239 29.7
Atru.chr5.1825 Acer truncatum HOM05D005324 ORTHO05D001185 3.6e-17 93.6 106 42.5
Ca_05672_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 3.6e-17 93.6 181 30.9
Ca_15184_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 3.6e-17 93.6 107 37.4
Glyma.19G076000 Glycine max HOM05D005324 ORTHO05D001185 3.6e-17 93.6 244 32.4
Lj3g0022640 Lotus japonicus HOM05D005324 ORTHO05D001185 3.6e-17 93.6 98 40.8
BraA06t26274Z Brassica rapa HOM05D003376 ORTHO05D001185 1.0e-16 92.0 75 62.7
Lj6g0011364 Lotus japonicus HOM05D005324 ORTHO05D001185 1.0e-16 92.0 220 30.9
Lj4g0024804 Lotus japonicus HOM05D005324 ORTHO05D001185 1.8e-16 91.3 184 31.0
Ca_25846_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 2.3e-16 90.9 295 28.1
Atru.chr3.3306 Acer truncatum HOM05D000477 ORTHO05D001185 4.0e-16 90.1 106 38.7
Ca_24087_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 4.0e-16 90.1 99 42.4
Atru.chr1.2264 Acer truncatum HOM05D005324 ORTHO05D001185 1.5e-15 88.2 93 41.9
Atru.chr4.605 Acer truncatum HOM05D005324 ORTHO05D001185 2.6e-15 87.4 106 37.7
Thhalv10028029m.g Eutrema salsugineum HOM05D003376 ORTHO05D001185 3.3e-15 87.0 285 26.7
A09p31910 Brassica napus HOM05D003376 ORTHO05D001185 1.7e-14 84.7 54 75.9
ECA246G2607 Erigeron canadensis HOM05D003326 ORTHO05D001185 1.7e-14 84.7 215 31.2
C05p40810 Brassica napus HOM05D003376 ORTHO05D001185 3.7e-14 83.6 63 63.5
BolC5t32825H Brassica oleracea HOM05D003376 ORTHO05D001185 3.7e-14 83.6 63 63.5
TAR623G0055 Trochodendron aralioides HOM05D003715 ORTHO05D003958 6.3e-14 82.8 179 32.4
Ca_23895_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 1.8e-13 81.3 374 26.2
ECA236G2931 Erigeron canadensis HOM05D003376 ORTHO05D001185 3.5e-12 77.0 218 29.8
Ca_22549_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 4.5e-12 76.6 210 30.5
Cc07_g21310 Coffea canephora HOM05D003376 ORTHO05D011089 4.5e-12 76.6 207 30.4
Cc00_g28290 Coffea canephora HOM05D003326 ORTHO05D001185 1.7e-11 74.7 206 29.1
ECA248G1318 Erigeron canadensis HOM05D003376 ORTHO05D001185 1.7e-11 74.7 90 38.9
Thhalv10001272m.g Eutrema salsugineum HOM05D003376 ORTHO05D001185 8.5e-11 72.4 75 41.3
Ca_14697_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 1.1e-10 72.0 150 27.3
Ca_23845_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 1.5e-10 71.6 72 44.4
Atru.chr9.596 Acer truncatum HOM05D005324 ORTHO05D001185 1.9e-10 71.2 112 35.7
Cc00_g09810 Coffea canephora HOM05D003326 ORTHO05D001185 3.2e-10 70.5 178 28.1
Glyma.11G180400 Glycine max HOM05D005324 ORTHO05D001185 3.2e-10 70.5 118 30.5
Atru.chr1.2372 Acer truncatum HOM05D005324 ORTHO05D001185 7.2e-10 69.3 66 43.9
Ca_07874_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 1.2e-09 68.6 295 24.1
Cc00_g34090 Coffea canephora HOM05D005324 ORTHO05D001185 3.6e-09 67.0 216 27.3
Ca_11652_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 1.0e-08 65.5 207 27.1
Ca_22528_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 3.0e-08 63.9 51 51.0
Ca_24116_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 1.5e-07 61.6 143 30.1
Ca_18104_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 7.5e-07 59.3 167 24.6
C07p27990 Brassica napus HOM05D003376 ORTHO05D001185 9.8e-07 58.9 228 28.9
Ca_03092_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 9.8e-07 58.9 197 28.4


User provided reference genes

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