Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g23141 Brassica carinata HOM05D003376 ORTHO05D001185 8.8e-63 243.4 121 100.0
BcaB01g00899 Brassica carinata HOM05D003376 ORTHO05D001185 3.5e-51 204.9 111 91.9
BcaC06g35708 Brassica carinata HOM05D003376 ORTHO05D001185 6.5e-42 174.1 111 74.8
A05p12450 Brassica napus HOM05D003376 ORTHO05D001185 9.5e-41 170.2 115 72.2
A06p25220 Brassica napus HOM05D003376 ORTHO05D001185 1.2e-40 169.9 115 71.3
A09p27420 Brassica napus HOM05D003376 ORTHO05D001185 3.6e-40 168.3 115 70.4
BcaB05g23142 Brassica carinata HOM05D003376 ORTHO05D001185 1.0e-39 166.8 111 81.1
BolC7t41653H Brassica oleracea HOM05D003376 ORTHO05D001185 1.4e-39 166.4 111 72.1
BcaB05g24586 Brassica carinata HOM05D003376 ORTHO05D001185 2.0e-38 162.5 86 91.9
A05p12400 Brassica napus HOM05D003376 ORTHO05D001185 2.6e-38 162.2 110 72.7
A04p12690 Brassica napus HOM05D003376 ORTHO05D001185 4.9e-37 157.9 115 65.2
BraA04t16927Z Brassica rapa HOM05D003376 ORTHO05D001185 4.9e-37 157.9 115 65.2
BcaB08g35327 Brassica carinata HOM05D003376 ORTHO05D001185 8.3e-37 157.1 86 89.5
BcaB04g18321 Brassica carinata HOM05D003376 ORTHO05D001185 5.9e-35 151.0 104 69.2
BolC4t23955H Brassica oleracea HOM05D003376 ORTHO05D001185 1.3e-34 149.8 97 72.2
Thhalv10001103m.g Eutrema salsugineum HOM05D003376 ORTHO05D001185 1.5e-33 146.4 115 65.2
BraA06t26272Z Brassica rapa HOM05D003376 ORTHO05D001185 1.6e-32 142.9 109 65.1
Thhalv10028343m.g Eutrema salsugineum HOM05D003376 ORTHO05D001185 2.8e-32 142.1 115 63.5
BolC1t03801H Brassica oleracea HOM05D003376 ORTHO05D001185 1.5e-30 136.3 111 59.5
BcaB07g32859 Brassica carinata HOM05D003376 ORTHO05D001185 7.5e-30 134.0 92 68.5
BcaC02g10207 Brassica carinata HOM05D003376 ORTHO05D001185 9.8e-30 133.7 101 62.4
BolC7t43332H Brassica oleracea HOM05D003376 ORTHO05D001185 1.4e-28 129.8 106 61.3
BraA01t02300Z Brassica rapa HOM05D003376 ORTHO05D001185 1.6e-27 126.3 72 81.9
A01p23930 Brassica napus HOM05D003376 ORTHO05D001185 1.3e-26 123.2 72 80.6
AL88U10020 Arabidopsis lyrata HOM05D003376 ORTHO05D001185 3.0e-26 122.1 104 61.5
AL8G17310 Arabidopsis lyrata HOM05D003376 ORTHO05D001185 3.9e-26 121.7 104 61.5
Thhalv10003417m.g Eutrema salsugineum HOM05D003376 ORTHO05D000048 3.9e-26 121.7 79 75.9
AL88U10010 Arabidopsis lyrata HOM05D003376 ORTHO05D001185 8.6e-26 120.6 104 60.6
AL8G17340 Arabidopsis lyrata HOM05D003376 ORTHO05D011035 1.1e-25 120.2 104 60.6
A09p25430 Brassica napus HOM05D003376 ORTHO05D001185 2.5e-25 119.0 87 66.7
AL3G45050 Arabidopsis lyrata HOM05D004134 ORTHO05D005240 9.5e-25 117.1 111 55.9
BolC1t03800H Brassica oleracea HOM05D003376 ORTHO05D001185 1.2e-24 116.7 72 73.6
AL6G42760 Arabidopsis lyrata HOM05D003376 ORTHO05D001185 2.8e-24 115.5 104 58.7
AL6G37690 Arabidopsis lyrata HOM05D003376 ORTHO05D001185 6.2e-24 114.4 104 58.7
AL1G57140 Arabidopsis lyrata HOM05D003376 ORTHO05D001185 2.0e-22 109.4 93 62.4
C04p31550 Brassica napus HOM05D003376 ORTHO05D001185 1.9e-20 102.8 74 63.5
AL8G17320 Arabidopsis lyrata HOM05D003376 ORTHO05D001185 6.6e-18 94.4 99 52.5
Thhalv10000496m.g Eutrema salsugineum HOM05D003376 ORTHO05D001185 3.6e-16 88.6 111 45.9
C03p85050 Brassica napus HOM05D003376 ORTHO05D001185 6.4e-13 77.8 53 69.8
BcaC09g49326 Brassica carinata HOM05D003376 ORTHO05D001185 4.1e-12 75.1 108 39.8
BolC1t03750H Brassica oleracea HOM05D003376 ORTHO05D001185 7.1e-12 74.3 40 82.5
C07p11790 Brassica napus HOM05D003376 ORTHO05D001185 1.6e-08 63.2 45 66.7
Thhalv10002934m.g Eutrema salsugineum HOM05D003376 ORTHO05D001185 4.0e-07 58.5 70 44.3


User provided reference genes

Program Settings