Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g23140 Brassica carinata HOM05D008665 ORTHO05D090973 1.7e-180 636.0 330 100.0
BcaB07g31283 Brassica carinata HOM05D008665 ORTHO05D016705 7.8e-138 494.2 365 76.4
BcaB06g25564 Brassica carinata HOM05D008665 ORTHO05D016705 5.7e-72 275.4 144 97.2
A04p31470 Brassica napus HOM05D008665 ORTHO05D021843 3.0e-65 253.1 266 58.3
BcaC04g21578 Brassica carinata HOM05D008665 ORTHO05D016705 5.2e-65 252.3 334 52.1
BraA02t08733Z Brassica rapa HOM05D008665 ORTHO05D021843 3.5e-61 239.6 216 63.4
A08p02730 Brassica napus HOM05D008665 ORTHO05D021843 6.5e-60 235.3 214 63.6
A01p04490 Brassica napus HOM05D008665 ORTHO05D021843 3.2e-59 233.0 216 62.0
A04p10000 Brassica napus HOM05D008665 ORTHO05D018606 1.8e-57 227.3 361 45.2
BraA04t16661Z Brassica rapa HOM05D008665 ORTHO05D018606 1.8e-57 227.3 361 45.2
C04p52270 Brassica napus HOM05D008665 ORTHO05D016705 1.5e-56 224.2 370 47.0
C09p05660 Brassica napus HOM05D008665 ORTHO05D018606 1.5e-56 224.2 306 48.4
BcaC09g48145 Brassica carinata HOM05D008665 ORTHO05D021843 1.7e-52 210.7 233 55.4
BolC2t08537H Brassica oleracea HOM05D008665 ORTHO05D018606 7.2e-51 205.3 296 47.6
BolC2t12487H Brassica oleracea HOM05D008665 ORTHO05D021843 2.1e-50 203.8 185 63.2
A09p67650 Brassica napus HOM05D008665 ORTHO05D016705 1.7e-44 184.1 149 69.1
BcaC03g14933 Brassica carinata HOM05D008665 ORTHO05D018606 6.1e-42 175.6 199 53.8
BcaC04g18661 Brassica carinata HOM05D008665 ORTHO05D018606 5.2e-41 172.6 243 47.3
BolC9t53494H Brassica oleracea HOM05D008665 ORTHO05D018606 1.2e-40 171.4 343 39.7
A03p67870 Brassica napus HOM05D008665 ORTHO05D018782 9.8e-40 168.3 377 37.4
BraA03t13413Z Brassica rapa HOM05D008665 ORTHO05D018782 5.4e-38 162.5 379 36.4
A04p11160 Brassica napus HOM05D008665 ORTHO05D018782 3.5e-37 159.8 370 37.0
C09p30230 Brassica napus HOM05D008665 ORTHO05D016705 1.9e-35 154.1 231 44.6
C02p29030 Brassica napus HOM05D008665 ORTHO05D016705 2.5e-35 153.7 239 45.2
A10p18030 Brassica napus HOM05D008665 ORTHO05D016705 8.0e-34 148.7 231 44.2
A03p35760 Brassica napus HOM05D008665 ORTHO05D018782 8.9e-33 145.2 329 36.2
BcaB06g27598 Brassica carinata HOM05D008665 ORTHO05D091485 1.6e-29 134.4 204 44.1
BolC7t46615H Brassica oleracea HOM05D008665 ORTHO05D018782 1.6e-29 134.4 395 33.9
BcaC04g23690 Brassica carinata HOM05D008665 ORTHO05D018606 2.8e-18 97.1 208 37.0
C07p61940 Brassica napus HOM05D008665 ORTHO05D018782 6.2e-18 95.9 346 31.8
C02p24280 Brassica napus HOM05D007371 ORTHO05D009319 1.1e-14 85.1 131 44.3
A01p06330 Brassica napus HOM05D008478 ORTHO05D027660 6.6e-12 75.9 253 29.6
BraA02t05251Z Brassica rapa HOM05D008478 ORTHO05D027660 6.6e-12 75.9 253 29.6
A04p09920 Brassica napus HOM05D008665 ORTHO05D097515 1.5e-11 74.7 159 39.0
BcaC03g13108 Brassica carinata HOM05D009120 ORTHO05D016116 2.5e-11 73.9 206 32.0
A08p33970 Brassica napus HOM05D008665 ORTHO05D031870 3.3e-11 73.6 54 64.8
A03p12770 Brassica napus HOM05D008665 ORTHO05D096726 4.3e-11 73.2 159 38.4
BraA06t25257Z Brassica rapa HOM05D009426 ORTHO05D014948 3.6e-10 70.1 279 28.7
BolC2t05979H Brassica oleracea HOM05D009120 ORTHO05D016116 1.4e-09 68.2 170 34.1
A06p17320 Brassica napus HOM05D009426 ORTHO05D014948 2.4e-09 67.4 289 28.4
A06p21680 Brassica napus HOM05D009426 ORTHO05D014948 3.1e-09 67.0 291 27.8
A07p29280 Brassica napus HOM05D009426 ORTHO05D014948 5.2e-09 66.2 289 29.8
BraA07t30567Z Brassica rapa HOM05D009426 ORTHO05D014948 1.2e-08 65.1 289 29.8
BcaB05g24318 Brassica carinata HOM05D009120 ORTHO05D001193 1.5e-08 64.7 217 31.3
C02p16780 Brassica napus HOM05D009120 ORTHO05D016116 1.5e-08 64.7 170 33.5
BcaB03g15260 Brassica carinata HOM05D009426 ORTHO05D014948 4.4e-08 63.2 238 28.2
BolC2t07782H Brassica oleracea HOM05D009120 ORTHO05D016116 1.3e-07 61.6 174 32.8
BraA09t37160Z Brassica rapa HOM05D008665 ORTHO05D016705 2.9e-07 60.5 73 47.9
BcaB06g27369 Brassica carinata HOM05D009426 ORTHO05D014948 3.8e-07 60.1 246 26.4
A02p21970 Brassica napus HOM05D008665 ORTHO05D018782 3.8e-07 60.1 143 36.4
BraA07t30488Z Brassica rapa HOM05D009120 ORTHO05D016116 6.4e-07 59.3 170 31.8
BraA01t02781Z Brassica rapa HOM05D009120 ORTHO05D016116 1.1e-06 58.5 170 31.8
A09p27870 Brassica napus HOM05D008665 ORTHO05D016705 1.4e-06 58.2 147 29.9
A07p38550 Brassica napus HOM05D009120 ORTHO05D016116 1.9e-06 57.8 171 31.6
BraA02t09237Z Brassica rapa HOM05D009120 ORTHO05D016116 1.9e-06 57.8 171 31.6


User provided reference genes

Program Settings