Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g23120 Brassica carinata HOM05D001498 ORTHO05D090647 3.1e-68 261.9 157 100.0
BcaB07g32913 Brassica carinata HOM05D001498 ORTHO05D091922 7.2e-57 224.2 165 82.4
BcaB03g16152 Brassica carinata HOM05D001498 ORTHO05D093112 3.7e-53 211.8 117 90.6
BcaB07g33220 Brassica carinata HOM05D001498 ORTHO05D096371 5.9e-35 151.4 83 91.6
BcaB01g01484 Brassica carinata HOM05D001498 ORTHO05D091615 7.5e-30 134.4 127 63.8
BcaB04g17776 Brassica carinata HOM05D001498 ORTHO05D092868 1.3e-29 133.7 123 63.4
BcaB07g32989 Brassica carinata HOM05D001498 ORTHO05D008559 2.2e-29 132.9 110 67.3
BcaB02g11279 Brassica carinata HOM05D001498 ORTHO05D095830 6.3e-29 131.3 83 80.7
BcaB07g33085 Brassica carinata HOM05D001498 ORTHO05D095625 8.2e-29 131.0 126 57.9
BcaB04g17678 Brassica carinata HOM05D001498 ORTHO05D094760 2.4e-28 129.4 163 60.1
BcaB05g23077 Brassica carinata HOM05D001498 ORTHO05D091436 5.3e-28 128.3 127 58.3
BcaB08g35016 Brassica carinata HOM05D001498 ORTHO05D092631 9.1e-28 127.5 127 57.5
C07p49110 Brassica napus HOM05D001498 ORTHO05D097837 9.1e-28 127.5 126 59.5
C03p66370 Brassica napus HOM05D001498 ORTHO05D011506 1.2e-27 127.1 113 64.6
BcaB01g03187 Brassica carinata HOM05D001498 ORTHO05D090608 3.5e-27 125.6 126 57.9
C06p31050 Brassica napus HOM05D001498 ORTHO05D011506 1.7e-26 123.2 113 62.8
BcaC05g27519 Brassica carinata HOM05D001498 ORTHO05D011506 3.8e-26 122.1 111 63.1
BolC1t03827H Brassica oleracea HOM05D001498 ORTHO05D011506 3.8e-26 122.1 127 58.3
BcaC08g44373 Brassica carinata HOM05D001498 ORTHO05D011506 6.5e-26 121.3 126 56.3
BolC2t11288H Brassica oleracea HOM05D001498 ORTHO05D011506 6.5e-26 121.3 113 61.9
BcaB07g32352 Brassica carinata HOM05D001498 ORTHO05D021639 8.5e-26 120.9 125 56.0
BcaB06g26483 Brassica carinata HOM05D001498 ORTHO05D095599 1.1e-25 120.6 128 54.7
BcaC07g38657 Brassica carinata HOM05D001498 ORTHO05D011506 1.1e-25 120.6 113 61.9
C04p21380 Brassica napus HOM05D001498 ORTHO05D013028 1.1e-25 120.6 121 58.7
C09p16580 Brassica napus HOM05D001498 ORTHO05D011506 1.1e-25 120.6 127 56.7
C09p27470 Brassica napus HOM05D001498 ORTHO05D011506 1.5e-25 120.2 113 61.1
BcaB02g11277 Brassica carinata HOM05D001498 ORTHO05D091891 2.5e-25 119.4 89 75.3
C09p17600 Brassica napus HOM05D001498 ORTHO05D011506 3.2e-25 119.0 120 58.3
A08p07550 Brassica napus HOM05D001498 ORTHO05D011506 4.2e-25 118.6 113 61.1
BcaB03g15933 Brassica carinata HOM05D001498 ORTHO05D021639 5.5e-25 118.2 125 55.2
C08p17880 Brassica napus HOM05D001498 ORTHO05D001885 9.4e-25 117.5 119 58.0
BolC9t54653H Brassica oleracea HOM05D001498 ORTHO05D011506 9.4e-25 117.5 119 58.0
C01p30520 Brassica napus HOM05D001498 ORTHO05D001885 1.2e-24 117.1 107 61.7
C01p38680 Brassica napus HOM05D001498 ORTHO05D011506 1.6e-24 116.7 122 58.2
C01p44920 Brassica napus HOM05D001498 ORTHO05D011506 2.1e-24 116.3 106 62.3
C03p56230 Brassica napus HOM05D001498 ORTHO05D001885 2.1e-24 116.3 121 56.2
C04p36710 Brassica napus HOM05D001498 ORTHO05D001885 2.1e-24 116.3 107 61.7
BcaB07g33315 Brassica carinata HOM05D001498 ORTHO05D091495 4.7e-24 115.2 113 57.5
A03p54380 Brassica napus HOM05D001498 ORTHO05D011506 6.1e-24 114.8 107 59.8
C02p52020 Brassica napus HOM05D001498 ORTHO05D011506 6.1e-24 114.8 107 61.7
BcaC02g09114 Brassica carinata HOM05D001498 ORTHO05D011506 8.0e-24 114.4 126 54.8
BcaC09g48967 Brassica carinata HOM05D001498 ORTHO05D011506 8.0e-24 114.4 104 62.5
BolC1t02817H Brassica oleracea HOM05D001498 ORTHO05D106172 1.8e-23 113.2 106 61.3
BolC3t19484H Brassica oleracea HOM05D001498 ORTHO05D011506 1.8e-23 113.2 106 62.3
BolC8t49067H Brassica oleracea HOM05D001498 ORTHO05D011506 4.0e-23 112.1 106 61.3
BcaB08g35076 Brassica carinata HOM05D001498 ORTHO05D021639 6.8e-23 111.3 104 59.6
BcaC04g20364 Brassica carinata HOM05D001498 ORTHO05D011506 6.8e-23 111.3 102 62.7
A08p09540 Brassica napus HOM05D001498 ORTHO05D011506 6.8e-23 111.3 104 61.5
BraA08t32774Z Brassica rapa HOM05D001498 ORTHO05D001885 8.8e-23 110.9 106 60.4
BolC3t17911H Brassica oleracea HOM05D001498 ORTHO05D008559 1.5e-22 110.2 120 55.8
BcaB04g18432 Brassica carinata HOM05D001498 ORTHO05D090882 4.4e-22 108.6 116 54.3
BcaC02g10287 Brassica carinata HOM05D001498 ORTHO05D093229 4.4e-22 108.6 121 54.5
BcaB06g25739 Brassica carinata HOM05D001498 ORTHO05D093323 7.5e-22 107.8 116 55.2
C01p48970 Brassica napus HOM05D001498 ORTHO05D011506 7.5e-22 107.8 115 59.1
C02p53500 Brassica napus HOM05D001498 ORTHO05D001885 9.8e-22 107.5 107 58.9
BolC8t47367H Brassica oleracea HOM05D001498 ORTHO05D011506 9.8e-22 107.5 119 53.8
A08p06060 Brassica napus HOM05D001498 ORTHO05D011506 3.7e-21 105.5 104 59.6
BcaB03g16298 Brassica carinata HOM05D001498 ORTHO05D095831 4.8e-21 105.1 161 54.0
C09p21170 Brassica napus HOM05D001498 ORTHO05D011506 6.3e-21 104.8 117 53.0
BolC9t55019H Brassica oleracea HOM05D001498 ORTHO05D011506 6.3e-21 104.8 117 53.0
BraA03t15290Z Brassica rapa HOM05D001498 ORTHO05D011506 8.3e-21 104.4 117 52.1
BcaB08g35461 Brassica carinata HOM05D001498 ORTHO05D090491 3.1e-20 102.4 116 53.4
BcaB07g33084 Brassica carinata HOM05D001498 ORTHO05D092207 1.2e-19 100.5 87 63.2
BolC5t31266H Brassica oleracea HOM05D001498 ORTHO05D019959 2.0e-19 99.8 126 46.8
BcaB07g33217 Brassica carinata HOM05D001498 ORTHO05D093085 2.7e-19 99.4 88 61.4
BcaB06g27027 Brassica carinata HOM05D001498 ORTHO05D092574 4.5e-19 98.6 92 64.1
BcaC05g25872 Brassica carinata HOM05D001498 ORTHO05D011506 5.9e-19 98.2 127 49.6
BcaB06g26727 Brassica carinata HOM05D001498 ORTHO05D093134 1.7e-18 96.7 100 57.0
BcaB05g23244 Brassica carinata HOM05D001498 ORTHO05D095601 2.9e-18 95.9 84 61.9
BcaB06g26755 Brassica carinata HOM05D001498 ORTHO05D092466 2.9e-18 95.9 96 57.3
BcaB06g26478 Brassica carinata HOM05D001498 ORTHO05D092859 3.8e-18 95.5 91 60.4
BcaB01g01816 Brassica carinata HOM05D001498 ORTHO05D091844 5.0e-18 95.1 88 62.5
BcaC01g03078 Brassica carinata HOM05D001498 ORTHO05D008559 5.0e-18 95.1 112 53.6
BcaB05g22943 Brassica carinata HOM05D001498 ORTHO05D096110 8.6e-18 94.4 86 58.1
BcaB06g26473 Brassica carinata HOM05D001498 ORTHO05D091656 1.1e-17 94.0 96 57.3
BcaB06g27273 Brassica carinata HOM05D001498 ORTHO05D094467 1.1e-17 94.0 101 54.5
C01p30560 Brassica napus HOM05D001498 ORTHO05D011506 1.1e-17 94.0 119 52.9
BcaC02g09776 Brassica carinata HOM05D001498 ORTHO05D016036 2.5e-17 92.8 78 67.9
C03p66000 Brassica napus HOM05D001498 ORTHO05D001885 3.3e-17 92.4 117 48.7
BcaC04g19551 Brassica carinata HOM05D001498 ORTHO05D090991 4.2e-17 92.0 105 54.3
BcaB04g18314 Brassica carinata HOM05D001498 ORTHO05D095953 5.5e-17 91.7 85 56.5
BcaB06g25736 Brassica carinata HOM05D001498 ORTHO05D021639 5.5e-17 91.7 82 59.8
BcaB03g16194 Brassica carinata HOM05D001498 ORTHO05D091006 1.2e-16 90.5 93 61.3
BcaB03g16497 Brassica carinata HOM05D001498 ORTHO05D008559 2.8e-16 89.4 95 57.9
BcaC02g11926 Brassica carinata HOM05D001498 ORTHO05D019959 3.6e-16 89.0 127 44.1
BcaB05g23246 Brassica carinata HOM05D001498 ORTHO05D090900 1.4e-15 87.0 85 55.3
BcaC08g44056 Brassica carinata HOM05D001498 ORTHO05D091470 3.0e-15 85.9 89 55.1
BcaB04g17703 Brassica carinata HOM05D001498 ORTHO05D021639 6.8e-15 84.7 95 51.6
BcaB03g16423 Brassica carinata HOM05D001498 ORTHO05D091575 2.0e-14 83.2 105 49.5
BcaC09g50109 Brassica carinata HOM05D001498 ORTHO05D093510 2.0e-14 83.2 69 62.3
BolC9t57107H Brassica oleracea HOM05D001498 ORTHO05D016694 2.0e-14 83.2 82 52.4
A01p28560 Brassica napus HOM05D001498 ORTHO05D021639 2.6e-14 82.8 73 61.6
C05p25290 Brassica napus HOM05D001498 ORTHO05D019959 4.4e-14 82.0 109 46.8
C09p42290 Brassica napus HOM05D001498 ORTHO05D016694 5.7e-14 81.6 82 51.2
BcaC02g11068 Brassica carinata HOM05D001498 ORTHO05D016694 7.5e-14 81.3 107 44.9
BcaC06g36329 Brassica carinata HOM05D001498 ORTHO05D096194 9.8e-14 80.9 126 43.7
BcaB01g01309 Brassica carinata HOM05D001498 ORTHO05D091216 1.3e-13 80.5 76 56.6
BcaC06g36688 Brassica carinata HOM05D001498 ORTHO05D001885 1.3e-13 80.5 88 55.7
BcaC06g35524 Brassica carinata HOM05D001498 ORTHO05D016694 2.8e-13 79.3 90 48.9
BolC4t23616H Brassica oleracea HOM05D001498 ORTHO05D016694 3.7e-13 79.0 107 43.9
BcaB01g01185 Brassica carinata HOM05D001498 ORTHO05D019959 4.9e-13 78.6 107 43.0
BcaB02g10765 Brassica carinata HOM05D001498 ORTHO05D095468 8.3e-13 77.8 98 44.9
C04p20860 Brassica napus HOM05D001498 ORTHO05D016694 8.3e-13 77.8 107 43.9
BcaC03g14315 Brassica carinata HOM05D001498 ORTHO05D008559 1.8e-12 76.6 78 59.0
BcaB07g33754 Brassica carinata HOM05D001498 ORTHO05D092729 3.1e-12 75.9 68 55.9
BcaC05g27663 Brassica carinata HOM05D001498 ORTHO05D090842 3.1e-12 75.9 76 51.3
BcaC04g20545 Brassica carinata HOM05D001498 ORTHO05D016694 7.0e-12 74.7 73 52.1
BolC7t41038H Brassica oleracea HOM05D001498 ORTHO05D032253 7.0e-12 74.7 79 54.4
BcaB06g27205 Brassica carinata HOM05D001498 ORTHO05D091204 9.2e-12 74.3 98 43.9
C07p06210 Brassica napus HOM05D001498 ORTHO05D032253 9.2e-12 74.3 79 54.4
BcaB02g11227 Brassica carinata HOM05D001498 ORTHO05D093168 1.6e-11 73.6 44 84.1
BcaB05g22880 Brassica carinata HOM05D001498 ORTHO05D019959 2.0e-11 73.2 89 47.2
BcaC05g26789 Brassica carinata HOM05D001498 ORTHO05D094205 2.7e-11 72.8 67 62.7
BcaC04g22591 Brassica carinata HOM05D001498 ORTHO05D095898 1.0e-10 70.9 67 61.2
BcaC06g36230 Brassica carinata HOM05D001498 ORTHO05D032253 1.3e-10 70.5 75 54.7
BcaB02g11218 Brassica carinata HOM05D001224 ORTHO05D010571 8.6e-10 67.8 108 43.5
BcaB01g01371 Brassica carinata HOM05D001498 ORTHO05D091381 1.5e-09 67.0 75 45.3
BcaB07g33213 Brassica carinata HOM05D001498 ORTHO05D090837 4.3e-09 65.5 114 37.7
BcaC03g13777 Brassica carinata HOM05D001498 ORTHO05D091916 5.6e-09 65.1 90 45.6
BcaC04g20544 Brassica carinata HOM05D001498 ORTHO05D016694 1.2e-08 63.9 61 52.5
C04p09850 Brassica napus HOM05D001498 ORTHO05D101798 4.7e-08 62.0 75 45.3
BcaB05g24509 Brassica carinata HOM05D001379 ORTHO05D001277 8.0e-08 61.2 63 50.8
BcaB04g17490 Brassica carinata HOM05D001498 ORTHO05D019959 2.3e-07 59.7 72 43.1
BcaB07g33140 Brassica carinata HOM05D015118 ORTHO05D019993 3.0e-07 59.3 67 47.8
BcaB06g26678 Brassica carinata HOM05D001498 ORTHO05D094527 9.8e-06 54.3 75 45.3
C07p13940 Brassica napus HOM05D001379 ORTHO05D001277 9.8e-06 54.3 78 41.0


User provided reference genes

Program Settings