Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g23112 Brassica carinata HOM05D009446 ORTHO05D012588 2.4e-34 148.3 77 100.0
BcaC09g49934 Brassica carinata HOM05D009446 ORTHO05D012588 1.8e-21 105.5 77 76.6
BolC1t03039H Brassica oleracea HOM05D009446 ORTHO05D012588 1.8e-21 105.5 77 76.6
C01p31040 Brassica napus HOM05D009446 ORTHO05D012588 9.0e-21 103.2 77 75.3
BraA01t02396Z Brassica rapa HOM05D009446 ORTHO05D012588 1.5e-15 85.9 73 72.6
AT3G49305 Arabidopsis thaliana HOM05D009446 ORTHO05D012588 3.7e-14 81.3 79 65.8
Carub.0005s1552 Capsella rubella HOM05D009446 ORTHO05D012588 8.2e-14 80.1 70 65.7
Sp5g12770 Schrenkiella parvula HOM05D009446 ORTHO05D012588 1.8e-13 79.0 64 68.8
AL5G29030 Arabidopsis lyrata HOM05D009446 ORTHO05D012588 5.9e-12 73.9 85 58.8
AL5G28960 Arabidopsis lyrata HOM05D009446 ORTHO05D080753 1.3e-11 72.8 75 62.7
AT3G49300 Arabidopsis thaliana HOM05D009446 ORTHO05D012588 1.3e-11 72.8 70 61.4
CARHR158210 Cardamine hirsuta HOM05D009446 ORTHO05D012588 1.9e-10 68.9 69 62.3
CARHR158200 Cardamine hirsuta HOM05D009446 ORTHO05D012588 3.9e-08 61.2 71 54.9
AT3G49270 Arabidopsis thaliana HOM05D009446 ORTHO05D082019 6.7e-08 60.5 75 57.3
Sp5g12800 Schrenkiella parvula HOM05D009446 ORTHO05D018642 1.3e-06 56.2 64 54.7
Sp5g12780 Schrenkiella parvula HOM05D009446 ORTHO05D012588 8.2e-06 53.5 57 57.9


User provided reference genes

Program Settings