Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g23111 Brassica carinata HOM05D003835 ORTHO05D004930 3.9e-23 110.5 53 100.0
BcaB04g17199 Brassica carinata HOM05D003835 ORTHO05D004930 5.3e-20 100.1 53 90.6
BcaB06g26909 Brassica carinata HOM05D003835 ORTHO05D004930 1.7e-18 95.1 48 93.8
BcaB06g26908 Brassica carinata HOM05D003835 ORTHO05D004930 4.2e-17 90.5 48 89.6
BcaB01g01376 Brassica carinata HOM05D003835 ORTHO05D004930 5.4e-17 90.1 43 97.7
BcaC01g02153 Brassica carinata HOM05D003835 ORTHO05D004930 2.3e-15 84.7 49 81.6
BcaC06g35964 Brassica carinata HOM05D003835 ORTHO05D004930 3.9e-15 84.0 45 86.7
BcaC06g35991 Brassica carinata HOM05D003835 ORTHO05D014092 6.7e-15 83.2 47 80.9
BcaC07g37567 Brassica carinata HOM05D003835 ORTHO05D014092 1.1e-14 82.4 49 75.5
BcaC09g49698 Brassica carinata HOM05D003835 ORTHO05D004930 1.5e-14 82.0 47 83.0
BcaC02g10732 Brassica carinata HOM05D003835 ORTHO05D004930 1.9e-14 81.6 49 77.6
BcaC03g17353 Brassica carinata HOM05D003835 ORTHO05D004930 2.5e-14 81.3 45 84.4
BraA05t21049Z Brassica rapa HOM05D003835 ORTHO05D014092 3.3e-14 80.9 49 77.6
BcaC03g16671 Brassica carinata HOM05D003835 ORTHO05D004930 4.3e-14 80.5 49 77.6
BcaC02g10387 Brassica carinata HOM05D003835 ORTHO05D004930 7.4e-14 79.7 47 78.7
BcaC06g35836 Brassica carinata HOM05D003835 ORTHO05D004930 9.6e-14 79.3 49 77.6
BcaC09g49645 Brassica carinata HOM05D003835 ORTHO05D004930 1.3e-13 79.0 47 76.6
BcaC01g02168 Brassica carinata HOM05D003835 ORTHO05D004930 2.8e-13 77.8 49 73.5
BcaC03g16231 Brassica carinata HOM05D003835 ORTHO05D014092 2.8e-13 77.8 47 72.3
BraA08t32792Z Brassica rapa HOM05D003835 ORTHO05D004930 3.7e-13 77.4 43 79.1
BcaC03g16196 Brassica carinata HOM05D003835 ORTHO05D004930 4.8e-13 77.0 49 77.6
BolC1t03343H Brassica oleracea HOM05D003835 ORTHO05D004930 4.8e-13 77.0 47 78.7
BcaB01g01100 Brassica carinata HOM05D003835 ORTHO05D004930 6.2e-13 76.6 38 89.5
BraA05t21182Z Brassica rapa HOM05D003835 ORTHO05D004930 6.2e-13 76.6 49 75.5
BcaC01g02117 Brassica carinata HOM05D003835 ORTHO05D004930 8.1e-13 76.3 47 76.6
BcaB05g23138 Brassica carinata HOM05D003835 ORTHO05D004930 1.1e-12 75.9 40 85.0
BcaC06g35918 Brassica carinata HOM05D003835 ORTHO05D004930 1.1e-12 75.9 47 76.6
BolC6t36351H Brassica oleracea HOM05D003835 ORTHO05D014092 1.8e-12 75.1 47 72.3
BcaC03g16676 Brassica carinata HOM05D003835 ORTHO05D004930 2.4e-12 74.7 47 76.6
BcaC05g27887 Brassica carinata HOM05D003835 ORTHO05D004930 2.4e-12 74.7 47 68.1
BcaC03g16445 Brassica carinata HOM05D003835 ORTHO05D004930 3.1e-12 74.3 49 71.4
BcaC06g36022 Brassica carinata HOM05D003835 ORTHO05D004930 3.1e-12 74.3 47 70.2
C05p36390 Brassica napus HOM05D003835 ORTHO05D014092 4.0e-12 73.9 45 73.3
BcaC02g10604 Brassica carinata HOM05D003835 ORTHO05D004930 5.3e-12 73.6 47 72.3
BcaC05g27703 Brassica carinata HOM05D003835 ORTHO05D004930 1.5e-11 72.0 48 75.0
BraA09t39004Z Brassica rapa HOM05D003835 ORTHO05D014092 1.5e-11 72.0 45 71.1
BcaC01g02337 Brassica carinata HOM05D003835 ORTHO05D014092 2.0e-11 71.6 45 75.6
BcaC03g16229 Brassica carinata HOM05D003835 ORTHO05D014092 2.0e-11 71.6 48 66.7
BcaC04g20890 Brassica carinata HOM05D003835 ORTHO05D014092 2.6e-11 71.2 45 73.3
BolC8t47786H Brassica oleracea HOM05D003835 ORTHO05D014092 3.4e-11 70.9 39 82.1
BcaC06g36461 Brassica carinata HOM05D003835 ORTHO05D004930 7.6e-11 69.7 37 89.2
BcaC04g20851 Brassica carinata HOM05D003835 ORTHO05D004930 9.9e-11 69.3 47 68.1
BcaC07g37472 Brassica carinata HOM05D003835 ORTHO05D014092 1.3e-10 68.9 38 81.6
BcaC03g16787 Brassica carinata HOM05D003835 ORTHO05D004930 1.7e-10 68.6 41 78.0
BcaC07g37247 Brassica carinata HOM05D003835 ORTHO05D004930 6.4e-10 66.6 45 73.3
BcaC05g27889 Brassica carinata HOM05D003835 ORTHO05D014092 8.4e-10 66.2 47 68.1
BolC8t47946H Brassica oleracea HOM05D003835 ORTHO05D004930 4.2e-09 63.9 47 66.0
BcaC06g35829 Brassica carinata HOM05D003835 ORTHO05D004930 5.5e-09 63.5 34 82.4
BolC2t11372H Brassica oleracea HOM05D003835 ORTHO05D004930 5.5e-09 63.5 49 55.1
BraA03t15672Z Brassica rapa HOM05D003835 ORTHO05D004930 9.3e-09 62.8 35 77.1
BcaC03g16405 Brassica carinata HOM05D003835 ORTHO05D004930 1.6e-08 62.0 48 66.7
BcaC04g20842 Brassica carinata HOM05D003835 ORTHO05D004930 1.9e-06 55.1 34 67.6
BcaC03g16553 Brassica carinata HOM05D003835 ORTHO05D004930 2.5e-06 54.7 31 83.9


User provided reference genes

Program Settings