Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g23104 Brassica carinata HOM05D004375 ORTHO05D008558 0.0e+00 1231.5 700 100.0
BcaB01g03719 Brassica carinata HOM05D004375 ORTHO05D008558 5.8e-292 1007.3 683 88.1
BcaB07g32629 Brassica carinata HOM05D004375 ORTHO05D008558 5.9e-244 847.8 691 72.2
BcaB06g26290 Brassica carinata HOM05D004375 ORTHO05D008558 5.5e-242 841.3 758 64.2
BcaB05g21909 Brassica carinata HOM05D004375 ORTHO05D008558 4.8e-230 801.6 572 83.2
BcaB05g24722 Brassica carinata HOM05D004375 ORTHO05D091882 3.1e-229 798.9 525 93.5
BcaB05g22558 Brassica carinata HOM05D004375 ORTHO05D008558 1.3e-206 723.8 717 59.4
BcaB02g10241 Brassica carinata HOM05D004375 ORTHO05D008558 9.3e-157 558.1 739 47.8
BcaB05g21622 Brassica carinata HOM05D004375 ORTHO05D008558 2.1e-156 557.0 545 66.6
BcaB07g32718 Brassica carinata HOM05D004375 ORTHO05D008558 3.4e-135 486.5 751 42.5
BcaC04g21457 Brassica carinata HOM05D004375 ORTHO05D008558 1.1e-88 332.0 778 37.4
BolC9t56012H Brassica oleracea HOM05D004375 ORTHO05D008558 1.4e-88 331.6 770 38.2
BcaC04g23067 Brassica carinata HOM05D004375 ORTHO05D008558 1.5e-85 321.6 764 37.7
C09p31560 Brassica napus HOM05D004375 ORTHO05D008558 1.8e-83 314.7 759 37.9
BcaB05g23866 Brassica carinata HOM05D004375 ORTHO05D008558 4.6e-79 300.1 702 35.0
C02p27470 Brassica napus HOM05D004375 ORTHO05D008558 6.6e-78 296.2 755 36.3
C06p12490 Brassica napus HOM05D004375 ORTHO05D008558 2.4e-75 287.7 715 38.5
BcaC02g09621 Brassica carinata HOM05D004375 ORTHO05D008558 1.6e-71 275.0 704 39.1
C07p19300 Brassica napus HOM05D004375 ORTHO05D008558 9.3e-64 249.2 753 31.7
BcaC03g15172 Brassica carinata HOM05D004375 ORTHO05D008558 3.9e-62 243.8 685 32.0
BcaC02g10128 Brassica carinata HOM05D004375 ORTHO05D008558 1.3e-60 238.8 715 33.8
BcaC03g15201 Brassica carinata HOM05D004375 ORTHO05D008558 1.6e-60 238.4 719 31.4
BolC2t08831H Brassica oleracea HOM05D004375 ORTHO05D008558 4.8e-60 236.9 769 30.8
BolC9t56614H Brassica oleracea HOM05D004375 ORTHO05D031763 2.4e-59 234.6 695 32.2
BcaB07g33031 Brassica carinata HOM05D004375 ORTHO05D008558 1.2e-58 232.3 757 30.6
C02p27860 Brassica napus HOM05D004375 ORTHO05D008558 2.9e-57 227.6 766 30.8
C02p28420 Brassica napus HOM05D004375 ORTHO05D008558 3.8e-57 227.3 769 29.8
BcaC06g35536 Brassica carinata HOM05D004375 ORTHO05D008558 1.4e-56 225.3 757 29.6
BraA09t39239Z Brassica rapa HOM05D004375 ORTHO05D008558 1.9e-56 224.9 707 33.4
BcaB01g03503 Brassica carinata HOM05D004375 ORTHO05D008558 2.4e-56 224.6 757 31.3
BcaC04g20927 Brassica carinata HOM05D004375 ORTHO05D031763 1.5e-53 215.3 717 30.3
BcaB05g23703 Brassica carinata HOM05D004375 ORTHO05D008558 8.1e-52 209.5 761 30.0
BraA07t28625Z Brassica rapa HOM05D004375 ORTHO05D008558 3.1e-51 207.6 669 31.2
BcaC03g15251 Brassica carinata HOM05D004375 ORTHO05D008558 6.9e-51 206.5 743 30.0
A02p26110 Brassica napus HOM05D004375 ORTHO05D008558 6.9e-51 206.5 676 30.2
A09p17280 Brassica napus HOM05D004375 ORTHO05D008558 9.9e-50 202.6 687 30.1
BcaB05g23325 Brassica carinata HOM05D004375 ORTHO05D008558 9.3e-48 196.1 239 45.6
A01p20690 Brassica napus HOM05D004375 ORTHO05D008558 7.9e-47 193.0 693 29.3
A02p20030 Brassica napus HOM05D004375 ORTHO05D008558 1.3e-44 185.7 270 40.4
A03p68120 Brassica napus HOM05D004375 ORTHO05D008558 1.5e-42 178.7 270 40.4
C01p14310 Brassica napus HOM05D004375 ORTHO05D008558 1.5e-42 178.7 272 39.7
BcaB04g17136 Brassica carinata HOM05D004375 ORTHO05D008558 1.1e-40 172.6 664 29.1
BcaB03g15947 Brassica carinata HOM05D004375 ORTHO05D008558 3.5e-39 167.5 651 27.5
BcaC01g06196 Brassica carinata HOM05D004375 ORTHO05D008558 1.0e-38 166.0 739 27.5
BcaB02g10812 Brassica carinata HOM05D004375 ORTHO05D008558 7.4e-37 159.8 775 26.7
BolC2t08886H Brassica oleracea HOM05D004375 ORTHO05D008558 1.1e-35 156.0 644 28.3
A05p27930 Brassica napus HOM05D004375 ORTHO05D008558 4.1e-35 154.1 216 39.8
C09p37810 Brassica napus HOM05D004375 ORTHO05D031763 9.0e-35 152.9 248 41.1
C01p25790 Brassica napus HOM05D004375 ORTHO05D008558 4.5e-34 150.6 578 30.4
BcaB05g23011 Brassica carinata HOM05D004375 ORTHO05D008558 2.9e-33 147.9 701 27.7
BcaB01g04420 Brassica carinata HOM05D004375 ORTHO05D008558 1.2e-31 142.5 772 26.8
BcaB02g06988 Brassica carinata HOM05D004375 ORTHO05D008558 2.1e-31 141.7 337 34.4
BcaB07g32109 Brassica carinata HOM05D004375 ORTHO05D008558 1.8e-30 138.7 83 90.4
A09p37300 Brassica napus HOM05D004375 ORTHO05D008558 1.5e-29 135.6 553 32.4
C01p28010 Brassica napus HOM05D004375 ORTHO05D008558 1.5e-29 135.6 258 33.7
BcaB08g35442 Brassica carinata HOM05D004375 ORTHO05D008558 1.9e-29 135.2 784 26.8
BcaB05g24368 Brassica carinata HOM05D004375 ORTHO05D008558 5.7e-29 133.7 115 55.7
BcaB07g32958 Brassica carinata HOM05D004375 ORTHO05D008558 1.7e-28 132.1 659 28.1
C01p25780 Brassica napus HOM05D004375 ORTHO05D008558 1.7e-28 132.1 110 60.0
BolC7t41868H Brassica oleracea HOM05D004375 ORTHO05D008558 1.7e-28 132.1 574 28.7
BraA09t39238Z Brassica rapa HOM05D004375 ORTHO05D008558 6.3e-28 130.2 199 40.7
BcaB02g09193 Brassica carinata HOM05D004375 ORTHO05D008558 8.2e-28 129.8 250 35.6
BcaB06g28882 Brassica carinata HOM05D004375 ORTHO05D008558 6.9e-27 126.7 269 33.1
A10p10580 Brassica napus HOM05D004375 ORTHO05D008558 4.5e-26 124.0 759 25.3
BcaC09g49739 Brassica carinata HOM05D004375 ORTHO05D008558 1.7e-25 122.1 267 31.8
BraA06t26008Z Brassica rapa HOM05D004375 ORTHO05D008558 2.7e-23 114.8 265 30.9
C01p14320 Brassica napus HOM05D004375 ORTHO05D008558 3.9e-22 110.9 182 42.3
BolC1t02734H Brassica oleracea HOM05D004375 ORTHO05D008558 5.1e-22 110.5 110 48.2
BolC1t02527H Brassica oleracea HOM05D004375 ORTHO05D008558 1.5e-21 109.0 162 43.8
BcaC03g15253 Brassica carinata HOM05D004375 ORTHO05D008558 5.7e-21 107.1 215 34.9
BolC3t21361H Brassica oleracea HOM05D004375 ORTHO05D008558 5.7e-21 107.1 552 26.6
BraA03t15607Z Brassica rapa HOM05D004375 ORTHO05D008558 1.8e-19 102.1 110 45.5
A10p33190 Brassica napus HOM05D004375 ORTHO05D008558 4.1e-19 100.9 220 35.0
A07p43390 Brassica napus HOM05D004375 ORTHO05D008558 2.6e-18 98.2 732 26.5
BolC2t11150H Brassica oleracea HOM05D004375 ORTHO05D106812 2.2e-17 95.1 108 47.2
BraA05t20802Z Brassica rapa HOM05D004375 ORTHO05D008558 1.1e-16 92.8 88 54.5
BolC1t03873H Brassica oleracea HOM05D004375 ORTHO05D008558 4.2e-16 90.9 88 48.9
BolC4t24807H Brassica oleracea HOM05D004375 ORTHO05D008558 2.1e-15 88.6 62 72.6
BolC9t54141H Brassica oleracea HOM05D004375 ORTHO05D008558 2.7e-15 88.2 62 72.6
BcaC03g15252 Brassica carinata HOM05D004375 ORTHO05D008558 2.3e-14 85.1 157 37.6
C01p39240 Brassica napus HOM05D004375 ORTHO05D008558 2.3e-14 85.1 80 50.0
C02p50680 Brassica napus HOM05D004375 ORTHO05D008558 2.3e-14 85.1 77 55.8
BolC3t21360H Brassica oleracea HOM05D004375 ORTHO05D008558 8.8e-14 83.2 66 56.1
BcaC09g51321 Brassica carinata HOM05D004375 ORTHO05D008558 1.7e-12 79.0 96 43.8
A10p33200 Brassica napus HOM05D004375 ORTHO05D008558 4.8e-12 77.4 284 31.7
A09p37230 Brassica napus HOM05D004375 ORTHO05D008558 8.2e-12 76.6 505 27.3
A05p27920 Brassica napus HOM05D004375 ORTHO05D008558 3.1e-11 74.7 108 45.4
A09p24250 Brassica napus HOM05D004375 ORTHO05D008558 3.1e-11 74.7 196 35.7
BcaC03g14687 Brassica carinata HOM05D004375 ORTHO05D008558 1.0e-09 69.7 89 44.9
A03p67640 Brassica napus HOM05D004375 ORTHO05D008558 8.5e-09 66.6 223 32.3
BraA02t07607Z Brassica rapa HOM05D004375 ORTHO05D008558 4.2e-08 64.3 266 29.7
BcaC08g43054 Brassica carinata HOM05D004375 ORTHO05D016039 1.2e-07 62.8 129 31.0
A05p24130 Brassica napus HOM05D004375 ORTHO05D008558 1.2e-07 62.8 668 22.8
BcaB03g16500 Brassica carinata HOM05D004375 ORTHO05D008558 1.8e-06 58.9 558 25.4
BcaB07g29670 Brassica carinata HOM05D004375 ORTHO05D091945 3.0e-06 58.2 64 40.6
C01p30040 Brassica napus HOM05D004375 ORTHO05D016090 3.0e-06 58.2 116 32.8
BolC1t02944H Brassica oleracea HOM05D004375 ORTHO05D016090 3.0e-06 58.2 116 32.8
BcaB01g03337 Brassica carinata HOM05D004375 ORTHO05D016039 6.7e-06 57.0 192 26.6
C03p10830 Brassica napus HOM05D004375 ORTHO05D008558 6.7e-06 57.0 122 36.9
C06p03140 Brassica napus HOM05D004375 ORTHO05D016039 6.7e-06 57.0 140 27.9
BolC6t35432H Brassica oleracea HOM05D004375 ORTHO05D016039 6.7e-06 57.0 140 27.9
C07p35600 Brassica napus HOM05D004375 ORTHO05D016039 8.8e-06 56.6 111 29.7
BolC7t44083H Brassica oleracea HOM05D004375 ORTHO05D016039 8.8e-06 56.6 111 29.7


User provided reference genes

Program Settings