Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g23099 Brassica carinata HOM05D008838 ORTHO05D017574 2.9e-88 328.6 168 100.0
BolC4t27364H Brassica oleracea HOM05D009418 ORTHO05D017574 6.9e-58 227.6 174 67.2
BolC4t26246H Brassica oleracea HOM05D008838 ORTHO05D017574 5.0e-56 221.5 175 65.1
C04p58410 Brassica napus HOM05D009418 ORTHO05D017574 2.1e-54 216.1 175 64.0
BolC6t36759H Brassica oleracea HOM05D008838 ORTHO05D017574 8.8e-53 210.7 185 61.6
A05p23620 Brassica napus HOM05D008838 ORTHO05D017574 2.5e-52 209.1 175 62.9
BraA05t21230Z Brassica rapa HOM05D008838 ORTHO05D017574 2.5e-52 209.1 175 62.9
BcaC08g44170 Brassica carinata HOM05D009418 ORTHO05D017574 6.3e-43 177.9 185 55.7
BcaB02g06726 Brassica carinata HOM05D009418 ORTHO05D094631 8.8e-37 157.5 136 58.8
BcaB04g17340 Brassica carinata HOM05D009418 ORTHO05D009842 3.6e-30 135.6 164 49.4
BcaB03g15637 Brassica carinata HOM05D009418 ORTHO05D027366 1.2e-22 110.5 167 40.7
BcaB01g01600 Brassica carinata HOM05D009418 ORTHO05D092871 4.7e-22 108.6 135 43.7
BcaB05g23461 Brassica carinata HOM05D009418 ORTHO05D011792 4.7e-14 82.0 128 37.5
BcaC08g46851 Brassica carinata HOM05D009418 ORTHO05D090315 4.7e-14 82.0 138 39.1
BcaC08g47159 Brassica carinata HOM05D009418 ORTHO05D090899 1.4e-13 80.5 131 37.4
A10p08780 Brassica napus HOM05D009418 ORTHO05D018626 6.8e-13 78.2 134 34.3
BraSC37t46125Z Brassica rapa HOM05D009418 ORTHO05D018626 6.8e-13 78.2 134 34.3
BcaB01g04195 Brassica carinata HOM05D009418 ORTHO05D018626 8.9e-13 77.8 134 35.8
BolC4t27750H Brassica oleracea HOM05D009418 ORTHO05D018626 8.9e-13 77.8 134 33.6
BcaB05g22096 Brassica carinata HOM05D009418 ORTHO05D011792 1.5e-12 77.0 138 36.2
C05p48960 Brassica napus HOM05D008838 ORTHO05D017578 2.0e-12 76.6 135 40.0
BolC5t33635H Brassica oleracea HOM05D008838 ORTHO05D017578 2.0e-12 76.6 135 40.0
BcaC02g07853 Brassica carinata HOM05D009418 ORTHO05D002311 2.6e-12 76.3 137 32.8
BraA08t34215Z Brassica rapa HOM05D008838 ORTHO05D017578 2.6e-12 76.3 140 41.4
BcaC01g03623 Brassica carinata HOM05D009418 ORTHO05D018626 3.4e-12 75.9 134 33.6
C08p22740 Brassica napus HOM05D009418 ORTHO05D018626 3.4e-12 75.9 134 33.6
C05p36670 Brassica napus HOM05D008838 ORTHO05D017578 4.4e-12 75.5 133 39.8
BolC8t49910H Brassica oleracea HOM05D009418 ORTHO05D018626 5.7e-12 75.1 134 33.6
C07p34790 Brassica napus HOM05D008838 ORTHO05D028150 1.3e-11 73.9 188 28.2
BolC6t37094H Brassica oleracea HOM05D008838 ORTHO05D017578 1.7e-11 73.6 137 39.4
BcaC08g44443 Brassica carinata HOM05D008838 ORTHO05D017578 2.2e-11 73.2 137 39.4
A03p26800 Brassica napus HOM05D016807 ORTHO05D021876 2.2e-11 73.2 168 37.5
A04p22210 Brassica napus HOM05D016807 ORTHO05D021876 2.2e-11 73.2 168 37.5
C06p18890 Brassica napus HOM05D008838 ORTHO05D017578 2.2e-11 73.2 137 39.4
BraA03t11891Z Brassica rapa HOM05D016807 ORTHO05D021876 2.2e-11 73.2 168 37.5
BcaC06g36744 Brassica carinata HOM05D008838 ORTHO05D011792 2.4e-10 69.7 103 43.7
BcaB07g32738 Brassica carinata HOM05D008838 ORTHO05D092174 9.2e-10 67.8 127 33.9
BcaC06g34686 Brassica carinata HOM05D018170 ORTHO05D024410 2.0e-09 66.6 58 58.6
BcaC03g15887 Brassica carinata HOM05D018170 ORTHO05D011195 5.9e-09 65.1 58 56.9
BcaB01g01348 Brassica carinata HOM05D008838 ORTHO05D021876 3.9e-08 62.4 164 33.5
A04p09610 Brassica napus HOM05D018170 ORTHO05D024410 1.9e-07 60.1 54 57.4
BolC8t49548H Brassica oleracea HOM05D008838 ORTHO05D011792 1.9e-07 60.1 102 42.2
BraA04t16620Z Brassica rapa HOM05D018170 ORTHO05D024410 1.9e-07 60.1 54 57.4
C04p40320 Brassica napus HOM05D009418 ORTHO05D018626 4.3e-07 58.9 128 30.5
BcaC06g35711 Brassica carinata HOM05D008838 ORTHO05D039997 7.3e-07 58.2 143 31.5
A03p51090 Brassica napus HOM05D008838 ORTHO05D039997 1.2e-06 57.4 164 29.9
A03p68050 Brassica napus HOM05D009418 ORTHO05D027366 1.2e-06 57.4 67 49.3
BraA01t02667Z Brassica rapa HOM05D009418 ORTHO05D027366 1.2e-06 57.4 67 49.3
C07p25620 Brassica napus HOM05D018170 ORTHO05D024410 8.0e-06 54.7 48 60.4
BolC7t43081H Brassica oleracea HOM05D018170 ORTHO05D024410 8.0e-06 54.7 48 60.4


User provided reference genes

Program Settings