Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g23095 Brassica carinata HOM05D003839 ORTHO05D003352 1.3e-25 119.0 61 100.0
BcaB01g00721 Brassica carinata HOM05D003839 ORTHO05D003352 2.9e-22 107.8 57 94.7
BcaB06g27258 Brassica carinata HOM05D003839 ORTHO05D003352 2.9e-22 107.8 57 94.7
BcaB07g32949 Brassica carinata HOM05D003839 ORTHO05D003352 5.0e-22 107.1 57 93.0
BcaB03g16839 Brassica carinata HOM05D003839 ORTHO05D003352 3.2e-21 104.4 57 91.2
BcaB04g17113 Brassica carinata HOM05D003839 ORTHO05D003352 3.2e-21 104.4 57 93.0
BcaB07g32609 Brassica carinata HOM05D003839 ORTHO05D003352 5.5e-21 103.6 53 98.1
BcaB01g02875 Brassica carinata HOM05D003839 ORTHO05D003352 3.6e-20 100.9 57 87.7
BcaB01g00717 Brassica carinata HOM05D003839 ORTHO05D003352 6.1e-20 100.1 53 94.3
BcaC05g27209 Brassica carinata HOM05D003839 ORTHO05D003352 5.7e-10 67.0 58 60.3
BraA01t02837Z Brassica rapa HOM05D003839 ORTHO05D003352 5.7e-10 67.0 58 60.3
BcaC05g27601 Brassica carinata HOM05D003839 ORTHO05D003352 7.4e-10 66.6 58 62.1
BcaC06g33695 Brassica carinata HOM05D003839 ORTHO05D003352 7.4e-10 66.6 58 63.8
BcaC07g38083 Brassica carinata HOM05D003839 ORTHO05D003352 7.4e-10 66.6 58 62.1
A02p28670 Brassica napus HOM05D003839 ORTHO05D003352 7.4e-10 66.6 58 62.1
C05p35870 Brassica napus HOM05D003839 ORTHO05D003352 7.4e-10 66.6 58 62.1
C05p53340 Brassica napus HOM05D003839 ORTHO05D003352 7.4e-10 66.6 58 62.1
BraA02t07902Z Brassica rapa HOM05D003839 ORTHO05D003352 7.4e-10 66.6 58 62.1
BolC5t32306H Brassica oleracea HOM05D003839 ORTHO05D003352 9.7e-10 66.2 58 60.3
BolC8t48491H Brassica oleracea HOM05D003839 ORTHO05D003352 9.7e-10 66.2 58 62.1
BcaC03g15184 Brassica carinata HOM05D003839 ORTHO05D003352 1.7e-09 65.5 58 62.1
C02p27640 Brassica napus HOM05D003839 ORTHO05D003352 1.7e-09 65.5 58 62.1
C03p63060 Brassica napus HOM05D003839 ORTHO05D003352 1.7e-09 65.5 58 62.1
BolC9t57767H Brassica oleracea HOM05D003839 ORTHO05D003352 1.7e-09 65.5 58 62.1
BcaC04g22104 Brassica carinata HOM05D003839 ORTHO05D003352 2.2e-09 65.1 58 62.1
BcaC06g35172 Brassica carinata HOM05D003839 ORTHO05D003352 2.8e-09 64.7 58 58.6
BcaC05g29109 Brassica carinata HOM05D003839 ORTHO05D003352 3.7e-09 64.3 58 60.3
A05p21290 Brassica napus HOM05D003839 ORTHO05D003352 3.7e-09 64.3 58 60.3
C05p53370 Brassica napus HOM05D003839 ORTHO05D003352 3.7e-09 64.3 58 60.3
BraA05t21037Z Brassica rapa HOM05D003839 ORTHO05D003352 3.7e-09 64.3 58 60.3
A05p21770 Brassica napus HOM05D003839 ORTHO05D003352 4.8e-09 63.9 58 60.3
BraA05t21098Z Brassica rapa HOM05D003839 ORTHO05D003352 4.8e-09 63.9 58 60.3
BcaC06g36011 Brassica carinata HOM05D003839 ORTHO05D003352 6.3e-09 63.5 58 60.3
BolC2t09048H Brassica oleracea HOM05D003839 ORTHO05D003352 6.3e-09 63.5 58 60.3
BolC5t34007H Brassica oleracea HOM05D003839 ORTHO05D003352 6.3e-09 63.5 58 60.3
BcaB06g26804 Brassica carinata HOM05D003839 ORTHO05D003352 8.2e-09 63.2 58 56.9
C02p27160 Brassica napus HOM05D003839 ORTHO05D003352 3.4e-07 57.8 41 61.0
BolC2t11209H Brassica oleracea HOM05D003839 ORTHO05D003352 3.4e-07 57.8 57 52.6
BraA01t03014Z Brassica rapa HOM05D003839 ORTHO05D003352 5.9e-07 57.0 57 57.9
BolC6t38134H Brassica oleracea HOM05D003839 ORTHO05D003352 7.7e-07 56.6 57 57.9
BcaC03g17190 Brassica carinata HOM05D003839 ORTHO05D003352 1.0e-06 56.2 57 52.6
BcaB08g35819 Brassica carinata HOM05D003839 ORTHO05D003352 1.7e-06 55.5 57 47.4
A05p17610 Brassica napus HOM05D003839 ORTHO05D003352 1.7e-06 55.5 56 53.6
BcaB08g35818 Brassica carinata HOM05D003839 ORTHO05D003352 2.9e-06 54.7 57 49.1
BcaC03g17189 Brassica carinata HOM05D003839 ORTHO05D003352 2.9e-06 54.7 57 50.9
C04p41030 Brassica napus HOM05D003839 ORTHO05D003352 6.5e-06 53.5 56 53.6
BolC4t25686H Brassica oleracea HOM05D003839 ORTHO05D003352 6.5e-06 53.5 56 53.6
A04p07260 Brassica napus HOM05D003839 ORTHO05D003352 8.5e-06 53.1 56 53.6
BraA04t16421Z Brassica rapa HOM05D003839 ORTHO05D003352 8.5e-06 53.1 56 53.6


User provided reference genes

Program Settings